public inbox for gentoo-commits@lists.gentoo.org
 help / color / mirror / Atom feed
From: "David Seifert" <soap@gentoo.org>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/files/
Date: Wed, 18 Apr 2018 18:15:59 +0000 (UTC)	[thread overview]
Message-ID: <1524075334.9f556bbd5e982b9d590218542007d5441de32232.soap@gentoo> (raw)

commit:     9f556bbd5e982b9d590218542007d5441de32232
Author:     Michael Mair-Keimberger <m.mairkeimberger <AT> gmail <DOT> com>
AuthorDate: Tue Apr 17 07:52:46 2018 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Wed Apr 18 18:15:34 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9f556bbd

sci-biology/bioruby: remove unused patch

Closes: https://github.com/gentoo/gentoo/pull/8034

 .../files/bioruby-1.4.3.0001-fix-tests.patch       | 29 ----------------------
 1 file changed, 29 deletions(-)

diff --git a/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch b/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch
deleted file mode 100644
index 71c4ca27104..00000000000
--- a/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch
+++ /dev/null
@@ -1,29 +0,0 @@
-From edda65b8fb32c2eee6b0652074981c31aa68b0eb Mon Sep 17 00:00:00 2001
-From: Naohisa Goto <ng@bioruby.org>
-Date: Fri, 23 Aug 2013 23:51:59 +0900
-Subject: [PATCH] Test bug fix: Read test file with binary mode to avoid
- encoding error
-
- * Test bug fix: Read test file with binary mode to avoid string encoding
-   error. Thanks to nieder (github.com/nieder) who reports the bug.
-   (https://github.com/bioruby/bioruby/issues/84)
----
- test/unit/bio/db/test_phyloxml.rb | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/test/unit/bio/db/test_phyloxml.rb b/test/unit/bio/db/test_phyloxml.rb
-index 0744c64..c24278d 100644
---- a/test/unit/bio/db/test_phyloxml.rb
-+++ b/test/unit/bio/db/test_phyloxml.rb
-@@ -100,7 +100,7 @@ def test_open_with_block
-     end
- 
-     def test_new
--      str = File.read(TestPhyloXMLData.example_xml)
-+      str = File.open(TestPhyloXMLData.example_xml, "rb") { |f| f.read }
-       assert_instance_of(Bio::PhyloXML::Parser,
-                          phyloxml = Bio::PhyloXML::Parser.new(str))
-       common_test_next_tree(phyloxml)
--- 
-1.8.4
-


                 reply	other threads:[~2018-04-18 18:16 UTC|newest]

Thread overview: [no followups] expand[flat|nested]  mbox.gz  Atom feed

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=1524075334.9f556bbd5e982b9d590218542007d5441de32232.soap@gentoo \
    --to=soap@gentoo.org \
    --cc=gentoo-commits@lists.gentoo.org \
    --cc=gentoo-dev@lists.gentoo.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox