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Mon, 2 Apr 2018 15:00:02 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 9225225A for ; Mon, 2 Apr 2018 15:00:00 +0000 (UTC) From: "Justin Bronder" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Bronder" Message-ID: <1522681177.2f8a5ab30deb3fe72df5f5336352b1b9ccbcf829.jsbronder@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sys-cluster/openmpi/ X-VCS-Repository: repo/gentoo X-VCS-Files: sys-cluster/openmpi/Manifest sys-cluster/openmpi/openmpi-3.0.1.ebuild X-VCS-Directories: sys-cluster/openmpi/ X-VCS-Committer: jsbronder X-VCS-Committer-Name: Justin Bronder X-VCS-Revision: 2f8a5ab30deb3fe72df5f5336352b1b9ccbcf829 X-VCS-Branch: master Date: Mon, 2 Apr 2018 15:00:00 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 978788fa-71ee-4a76-bcc3-8330e6c760e2 X-Archives-Hash: 9e103b9132b8127a05458c4dc7210806 commit: 2f8a5ab30deb3fe72df5f5336352b1b9ccbcf829 Author: Justin Bronder gentoo org> AuthorDate: Mon Apr 2 14:59:37 2018 +0000 Commit: Justin Bronder gentoo org> CommitDate: Mon Apr 2 14:59:37 2018 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2f8a5ab3 sys-cluster/openmpi: bump 3.0.1 Package-Manager: Portage-2.3.24, Repoman-2.3.6 sys-cluster/openmpi/Manifest | 1 + sys-cluster/openmpi/openmpi-3.0.1.ebuild | 171 +++++++++++++++++++++++++++++++ 2 files changed, 172 insertions(+) diff --git a/sys-cluster/openmpi/Manifest b/sys-cluster/openmpi/Manifest index 9c8565ff813..5312125db61 100644 --- a/sys-cluster/openmpi/Manifest +++ b/sys-cluster/openmpi/Manifest @@ -10,3 +10,4 @@ DIST openmpi-2.0.2.tar.bz2 8311215 BLAKE2B 8dd0d7b95c396e9a0f05760136bbf62defd35 DIST openmpi-2.0.4.tar.bz2 8272983 BLAKE2B 7d0a392fbc8c896cdccefb9bf0ff83fbd8db8a42d17f06cb23ac88ba896e2c75e1b1b7a79559d0ce3c2b881f197f54ce1bd8967c889bafe2b97f95fb6b957501 SHA512 2cccb83847d44f6282ec24f7bc12ab51b84dc5ac1a2a919ef0761847ff7cdcb31cfb1f38dca33df7063a98c27a64575a108002716d207cbba3a54773b999e6c5 DIST openmpi-2.1.3.tar.bz2 8311304 BLAKE2B a6a2d0d759a7207e4e9e9bb1526825ce5b0c9acd22c113f71712381fd7cab55228e78294533a5af6ef2b243803d789c5c71c6d59dd7a8ebbf10b2aa5d99296fd SHA512 61ecf53d840feb4cad1e792225c7fb07a8c4cb849f21693051359cde2cf1b5060de3a9d00ba3b55ded20b5b93bc5ac439951b4fe5cb1a74d4e800f26c979feba DIST openmpi-3.0.0.tar.bz2 9267606 BLAKE2B 9ee569a9c5f5918bb3d389a2945a2e7a5d98464afbd111eb2426a4e8296a23cf6d5b558554ce8126b13f910bd59acbb77e93ac297f3cf222c4bc764836b39ee6 SHA512 7e37eacf959a803d6d89dff4291b64a1f3d83bc7941b778a2fb13d12be0f205cb904e4a807d79676ad1e31fd99ffb15f255c8a227e830673455abb144f14616a +DIST openmpi-3.0.1.tar.bz2 9176460 BLAKE2B 65fdaeb492da3cf86a68c2d47d19568c8d65e92d0202041853ae3cbe0f057d8bdc79953538921b5b8c9eb9c9cedab8502816985e12524704992069a51e08d857 SHA512 15fad504ba743d564e7196b62a112027798d4b26e9c8d11d9c1c00ac2968f1858ebc168df30473104c5a31f71e38ab558204b598260b535a12b6094aa77182b8 diff --git a/sys-cluster/openmpi/openmpi-3.0.1.ebuild b/sys-cluster/openmpi/openmpi-3.0.1.ebuild new file mode 100644 index 00000000000..6393b65d02e --- /dev/null +++ b/sys-cluster/openmpi/openmpi-3.0.1.ebuild @@ -0,0 +1,171 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +FORTRAN_NEEDED=fortran + +inherit cuda flag-o-matic fortran-2 java-pkg-opt-2 toolchain-funcs versionator multilib-minimal + +MY_P=${P/-mpi} +S=${WORKDIR}/${MY_P} + +IUSE_OPENMPI_FABRICS=" + openmpi_fabrics_ofed + openmpi_fabrics_knem + openmpi_fabrics_psm" + +IUSE_OPENMPI_RM=" + openmpi_rm_pbs + openmpi_rm_slurm" + +IUSE_OPENMPI_OFED_FEATURES=" + openmpi_ofed_features_control-hdr-padding + openmpi_ofed_features_udcm + openmpi_ofed_features_rdmacm + openmpi_ofed_features_dynamic-sl" + +DESCRIPTION="A high-performance message passing library (MPI)" +HOMEPAGE="http://www.open-mpi.org" +SRC_URI="http://www.open-mpi.org/software/ompi/v$(get_version_component_range 1-2)/downloads/${MY_P}.tar.bz2" +LICENSE="BSD" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~arm ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux" +IUSE="cma cuda cxx elibc_FreeBSD fortran heterogeneous ipv6 java numa romio + ${IUSE_OPENMPI_FABRICS} ${IUSE_OPENMPI_RM} ${IUSE_OPENMPI_OFED_FEATURES}" + +REQUIRED_USE="openmpi_rm_slurm? ( !openmpi_rm_pbs ) + openmpi_rm_pbs? ( !openmpi_rm_slurm ) + openmpi_fabrics_psm? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_control-hdr-padding? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_udcm? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_rdmacm? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_dynamic-sl? ( openmpi_fabrics_ofed )" + +# dev-util/nvidia-cuda-toolkit is always multilib +CDEPEND=" + !sys-cluster/mpich + !sys-cluster/mpich2 + !sys-cluster/nullmpi + !sys-cluster/mpiexec + >=dev-libs/libevent-2.0.22[${MULTILIB_USEDEP},threads] + dev-libs/libltdl:0[${MULTILIB_USEDEP}] + >=sys-apps/hwloc-1.11.2[${MULTILIB_USEDEP},numa?] + >=sys-libs/zlib-1.2.8-r1[${MULTILIB_USEDEP}] + cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.19-r1 ) + elibc_FreeBSD? ( || ( dev-libs/libexecinfo >=sys-freebsd/freebsd-lib-10.0 ) ) + openmpi_fabrics_ofed? ( sys-fabric/ofed:* ) + openmpi_fabrics_knem? ( sys-cluster/knem ) + openmpi_fabrics_psm? ( sys-fabric/infinipath-psm:* ) + openmpi_rm_pbs? ( sys-cluster/torque ) + openmpi_rm_slurm? ( sys-cluster/slurm ) + openmpi_ofed_features_rdmacm? ( sys-fabric/librdmacm:* )" + +RDEPEND="${CDEPEND} + java? ( >=virtual/jre-1.6 )" + +DEPEND="${CDEPEND} + java? ( >=virtual/jdk-1.6 )" + +MULTILIB_WRAPPED_HEADERS=( + /usr/include/mpi.h + /usr/include/openmpi/ompi/mpi/java/mpiJava.h +) + +pkg_setup() { + fortran-2_pkg_setup + java-pkg-opt-2_pkg_setup + + elog + elog "OpenMPI has an overwhelming count of configuration options." + elog "Don't forget the EXTRA_ECONF environment variable can let you" + elog "specify configure options if you find them necessary." + elog +} + +src_prepare() { + default + + # Necessary for scalibility, see + # http://www.open-mpi.org/community/lists/users/2008/09/6514.php + echo 'oob_tcp_listen_mode = listen_thread' \ + >> opal/etc/openmpi-mca-params.conf || die +} + +multilib_src_configure() { + if use java; then + # We must always build with the right -source and -target + # flags. Passing flags to javac isn't explicitly supported here + # but we can cheat by overriding the configure test for javac. + export ac_cv_path_JAVAC="$(java-pkg_get-javac) $(java-pkg_javac-args)" + fi + + ECONF_SOURCE=${S} econf \ + --sysconfdir="${EPREFIX}/etc/${PN}" \ + --enable-pretty-print-stacktrace \ + --enable-orterun-prefix-by-default \ + --with-hwloc="${EPREFIX}/usr" \ + --with-libltdl="${EPREFIX}/usr" \ + --with-libevent="${EPREFIX}/usr" \ + --enable-mpi-fortran=$(usex fortran all no) \ + $(use_enable cxx mpi-cxx) \ + $(use_with cma) \ + $(use_with cuda cuda "${EPREFIX}"/opt/cuda) \ + $(use_enable romio io-romio) \ + $(use_enable heterogeneous) \ + $(use_enable ipv6) \ + $(multilib_native_use_enable java) \ + $(multilib_native_use_enable java mpi-java) \ + $(multilib_native_use_with openmpi_fabrics_ofed verbs "${EPREFIX}"/usr) \ + $(multilib_native_use_with openmpi_fabrics_knem knem "${EPREFIX}"/usr) \ + $(multilib_native_use_with openmpi_fabrics_psm psm "${EPREFIX}"/usr) \ + $(multilib_native_use_enable openmpi_ofed_features_control-hdr-padding openib-control-hdr-padding) \ + $(multilib_native_use_enable openmpi_ofed_features_rdmacm openib-rdmacm) \ + $(multilib_native_use_enable openmpi_ofed_features_udcm openib-udcm) \ + $(multilib_native_use_enable openmpi_ofed_features_dynamic-sl openib-dynamic-sl) \ + $(multilib_native_use_with openmpi_rm_pbs tm) \ + $(multilib_native_use_with openmpi_rm_slurm slurm) +} + +multilib_src_test() { + # Doesn't work with the default src_test as the dry run (-n) fails. + emake -j1 check +} + +multilib_src_install() { + default + + # fortran header cannot be wrapped (bug #540508), workaround part 1 + if multilib_is_native_abi && use fortran; then + mkdir "${T}"/fortran || die + mv "${ED}"usr/include/mpif* "${T}"/fortran || die + else + # some fortran files get installed unconditionally + rm \ + "${ED}"usr/include/mpif* \ + "${ED}"usr/bin/mpif* \ + "${ED}"usr/bin/oshfort \ + "${ED}"usr/bin/shmemfort \ + || die + fi +} + +multilib_src_install_all() { + # fortran header cannot be wrapped (bug #540508), workaround part 2 + if use fortran; then + mv "${T}"/fortran/mpif* "${ED}"usr/include || die + fi + + # Remove la files, no static libs are installed and we have pkg-config + find "${ED}" -name '*.la' -delete || die + + if use java; then + local mpi_jar="${ED}"usr/$(get_libdir)/mpi.jar + java-pkg_dojar "${mpi_jar}" + # We don't want to install the jar file twice + # so let's clean after ourselves. + rm "${mpi_jar}" || die + fi + + einstalldocs +}