[gentoo-commits] proj/sci:jlec/scilab commit in: sci-libs/fast5/

[gentoo-commits] proj/sci:jlec/scilab commit in: sci-libs/fast5/

[Justin Lecher]

commit:     671a509af3620833cc9bea743e7e6bcd828ade93
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Jan 24 21:38:46 2018 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jan 24 21:38:46 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=671a509a

sci-libs/fast5: document what is still broken in the ebuild

Package-Manager: Portage-2.3.19, Repoman-2.3.6

 sci-libs/fast5/fast5-9999.ebuild | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/sci-libs/fast5/fast5-9999.ebuild b/sci-libs/fast5/fast5-9999.ebuild
index c3b044e61..6574116c5 100644
--- a/sci-libs/fast5/fast5-9999.ebuild
+++ b/sci-libs/fast5/fast5-9999.ebuild
@@ -24,3 +24,5 @@ RDEPEND="${DEPEND}"
 src_compile(){
 	emake -C python develop-user HDF5_DIR="${EPREFIX}"/usr HDF5_LIB_DIR="${EPREFIX}"/usr/$(get_libdir)
 }
+
+# BUG: python stuff and binaries get installed into "${IMAGEDIR}"/homedir/.local/

[gentoo-commits] proj/sci:jlec/scilab commit in: sci-libs/fast5/

[Justin Lecher]

commit:     7964a3e5fde9e6f2c47e62f8c44d8570a90572f7
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Jan 24 21:08:39 2018 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jan 24 21:08:39 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7964a3e5

sci-libs/fast5: version bump, fix compile paths for hdf5

Package-Manager: Portage-2.3.19, Repoman-2.3.6

 sci-libs/fast5/{fast5-0.6.2.ebuild => fast5-0.6.4.ebuild} | 8 ++++----
 sci-libs/fast5/fast5-9999.ebuild                          | 6 +++---
 2 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/sci-libs/fast5/fast5-0.6.2.ebuild b/sci-libs/fast5/fast5-0.6.4.ebuild
similarity index 77%
rename from sci-libs/fast5/fast5-0.6.2.ebuild
rename to sci-libs/fast5/fast5-0.6.4.ebuild
index 186c157d4..181c2e593 100644
--- a/sci-libs/fast5/fast5-0.6.2.ebuild
+++ b/sci-libs/fast5/fast5-0.6.4.ebuild
@@ -1,15 +1,15 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
 
 PYTHON_COMPAT=( python{2_7,3_4} )
 
-inherit distutils-r1
+inherit distutils-r1 multilib
 
 DESCRIPTION="C++ header-only library for reading Oxford Nanopore Fast5 files"
 HOMEPAGE="https://github.com/mateidavid/fast5"
-SRC_URI="https://github.com/mateidavid/fast5/archive/v0.6.2.tar.gz -> ${P}.tar.gz"
+SRC_URI="https://github.com/mateidavid/fast5/archive/v${PV}.tar.gz -> ${P}.tar.gz"
 
 LICENSE="MIT"
 SLOT="0"
@@ -25,7 +25,7 @@ DEPEND="
 RDEPEND="${DEPEND}"
 
 src_compile(){
-	emake -C python develop-user
+	emake -C python develop-user HDF5_DIR="${EPREFIX}"/usr HDF5_LIB_DIR="${EPREFIX}"/usr/$(get_libdir)
 }
 
 src_install(){

diff --git a/sci-libs/fast5/fast5-9999.ebuild b/sci-libs/fast5/fast5-9999.ebuild
index a36740179..c3b044e61 100644
--- a/sci-libs/fast5/fast5-9999.ebuild
+++ b/sci-libs/fast5/fast5-9999.ebuild
@@ -1,11 +1,11 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
 
 PYTHON_COMPAT=( python{2_7,3_4} )
 
-inherit distutils-r1 git-r3
+inherit distutils-r1 multilib git-r3
 
 DESCRIPTION="C++ header-only library for reading Oxford Nanopore Fast5 files"
 HOMEPAGE="https://github.com/mateidavid/fast5"
@@ -22,5 +22,5 @@ DEPEND="
 RDEPEND="${DEPEND}"
 
 src_compile(){
-	emake -C python develop-user
+	emake -C python develop-user HDF5_DIR="${EPREFIX}"/usr HDF5_LIB_DIR="${EPREFIX}"/usr/$(get_libdir)
 }