From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id E36071396D9 for ; Tue, 21 Nov 2017 14:16:08 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 3CB71E0DC8; Tue, 21 Nov 2017 14:16:08 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 1D825E0DC8 for ; Tue, 21 Nov 2017 14:16:07 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 7A6B833BF43 for ; Tue, 21 Nov 2017 14:16:06 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 3D954A286 for ; Tue, 21 Nov 2017 14:16:05 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1511273755.6283a774209756751880212d783863da56b9f80e.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/SEECER/files/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/SEECER/files/remove-hardcoded-paths.patch X-VCS-Directories: sci-biology/SEECER/files/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 6283a774209756751880212d783863da56b9f80e X-VCS-Branch: master Date: Tue, 21 Nov 2017 14:16:05 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 63c98824-de5d-481b-90a6-47bc994961fc X-Archives-Hash: 37c8d01f781006a57de092c6e254da7f commit: 6283a774209756751880212d783863da56b9f80e Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Tue Nov 21 14:15:55 2017 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Tue Nov 21 14:15:55 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=6283a774 sci-biology/SEECER: 'patch -p1' and not 'patch -p0' is used Package-Manager: Portage-2.3.14, Repoman-2.3.6 sci-biology/SEECER/files/remove-hardcoded-paths.patch | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/sci-biology/SEECER/files/remove-hardcoded-paths.patch b/sci-biology/SEECER/files/remove-hardcoded-paths.patch index d8120e396..bb46f6a30 100644 --- a/sci-biology/SEECER/files/remove-hardcoded-paths.patch +++ b/sci-biology/SEECER/files/remove-hardcoded-paths.patch @@ -1,5 +1,5 @@ ---- bin/run_jellyfish.sh 2015-11-13 18:40:01.595807104 +0100 -+++ bin/run_jellyfish.sh 2015-11-13 18:51:45.655818838 +0100 +--- SEECER-0.1.3/bin/run_jellyfish.sh 2015-11-13 18:40:01.595807104 +0100 ++++ SEECER-0.1.3/bin/run_jellyfish.sh 2015-11-13 18:51:45.655818838 +0100 @@ -3,22 +3,27 @@ LCOUNT=$4 TMPDIR=$5 @@ -33,8 +33,8 @@ -$JF dump --lower-count=$LCOUNT -o $2 -c $TMPDIR/jf_merged_$3 +$JF dump --lower-count=$LCOUNT -o $2 -c $TMPDIR/jf_merged_$3 || exit 255 rm $TMPDIR/jf_merged_$3 ---- bin/run_seecer.sh 2015-11-13 18:40:16.215807347 +0100 -+++ bin/run_seecer.sh 2015-11-13 18:53:03.695820138 +0100 +--- SEECER-0.1.3/bin/run_seecer.sh 2015-11-13 18:40:16.215807347 +0100 ++++ SEECER-0.1.3/bin/run_seecer.sh 2015-11-13 18:53:03.695820138 +0100 @@ -25,8 +25,8 @@ #