[gentoo-commits] repo/gentoo:master commit in: sci-biology/eugene/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/eugene/

[Michael Palimaka]

commit:     de74eca1cad7030e0afac9af2dd4a66bc02101dd
Author:     Michael Palimaka <kensington <AT> gentoo <DOT> org>
AuthorDate: Sat Sep 30 04:37:25 2017 +0000
Commit:     Michael Palimaka <kensington <AT> gentoo <DOT> org>
CommitDate: Sat Sep 30 04:38:07 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=de74eca1

sci-biology/eugene: stabilise 4.1d for amd64/x86

Closes: https://bugs.gentoo.org/632358
Package-Manager: Portage-2.3.8, Repoman-2.3.3

 sci-biology/eugene/eugene-4.1d.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/eugene/eugene-4.1d.ebuild b/sci-biology/eugene/eugene-4.1d.ebuild
index eb805ffc317..dbf8139e9e2 100644
--- a/sci-biology/eugene/eugene-4.1d.ebuild
+++ b/sci-biology/eugene/eugene-4.1d.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
@@ -11,7 +11,7 @@ SRC_URI="https://mulcyber.toulouse.inra.fr/frs/download.php/1359/${P}.tar.gz"
 
 LICENSE="Artistic"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="amd64 x86"
 IUSE=""
 
 DEPEND="

[gentoo-commits] repo/gentoo:master commit in: sci-biology/eugene/

[Michael Palimaka]

commit:     9c27b6a1f88fc551e313a2788e1e65ac5220d01b
Author:     Michael Palimaka <kensington <AT> gentoo <DOT> org>
AuthorDate: Sat Sep 30 04:37:56 2017 +0000
Commit:     Michael Palimaka <kensington <AT> gentoo <DOT> org>
CommitDate: Sat Sep 30 04:38:07 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9c27b6a1

sci-biology/eugene: remove 4.1

Package-Manager: Portage-2.3.8, Repoman-2.3.3

 sci-biology/eugene/Manifest          |  1 -
 sci-biology/eugene/eugene-4.1.ebuild | 36 ------------------------------------
 2 files changed, 37 deletions(-)

diff --git a/sci-biology/eugene/Manifest b/sci-biology/eugene/Manifest
index d017c6516a4..598c6428311 100644
--- a/sci-biology/eugene/Manifest
+++ b/sci-biology/eugene/Manifest
@@ -1,2 +1 @@
-DIST eugene-4.1.tar.gz 7393361 SHA256 faff769f68e1ab1fdec61be34ec7fef3c73805734199765ba11cf1ea9c02f800 SHA512 f4bcf63103754f8fb577d311d181375732411fa926fb0cef86fcd00c373ed5cc5637f1b55fa375a4bb14c5181f7de1dc244570f74cdd1887b6107d5c6cea37b3 WHIRLPOOL 32f4539456c243dd3c6a9d5a986fea210e53e5566aaa0849a26f34832957100623570a0814193059420d53e553247584360635706844ed0ec55c4cc65e235ad4
 DIST eugene-4.1d.tar.gz 7473965 SHA256 c160e6b4206e6700c866f38fee2c8fd0d69972d51ebc5b4cb7680774a419f4c0 SHA512 dab37930e211b3783954f6e4a762450760201b77e0b4214f16724516d9be583d0a7ec44a2f510e73f4370e9c2dc67a425456a057fdba8f51cb72386e16a26ef5 WHIRLPOOL 7ab116acd48648673d2cc633bae26908bf8250c5a17b9d5e8719dfd56edcdf716406b80af26a99700d9ec81e625737c57fe16493f670245f21999fef1c6911eb

diff --git a/sci-biology/eugene/eugene-4.1.ebuild b/sci-biology/eugene/eugene-4.1.ebuild
deleted file mode 100644
index 6660504635e..00000000000
--- a/sci-biology/eugene/eugene-4.1.ebuild
+++ /dev/null
@@ -1,36 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit autotools eutils
-
-DESCRIPTION="Eukaryotic gene predictor"
-HOMEPAGE="http://www.inra.fr/mia/T/EuGene/"
-SRC_URI="https://mulcyber.toulouse.inra.fr/frs/download.php/1157/${P}.tar.gz"
-
-LICENSE="Artistic"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE=""
-
-DEPEND="
-	media-libs/gd[png]
-	media-libs/libpng:0=
-	"
-RDEPEND="${DEPEND}"
-
-RESTRICT="test"
-
-src_prepare() {
-	# https://mulcyber.toulouse.inra.fr/tracker/index.php?func=detail&aid=1170
-	epatch \
-		"${FILESDIR}"/${PN}-3.6-overflow.patch \
-		"${FILESDIR}"/${PN}-3.6-plugins.patch \
-		"${FILESDIR}"/${P}-format-security.patch
-	sed \
-		-e '/SUBDIRS/ s/doc//' \
-		-e '/INSTALL.*doc/ s/\(.*\)//' \
-		-i Makefile.am || die
-	eautoreconf
-}