[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioperl-network/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioperl-network/

[Michał Górny]

commit:     c84c6322768fcfbf30bfdef3a49c4d6f0a7e363a
Author:     David Hicks <david <AT> hicks <DOT> id <DOT> au>
AuthorDate: Sat Jul 29 18:40:36 2017 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sun Jul 30 10:04:22 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c84c6322

sci-biology/bioperl-network: use HTTPS for GitHub

Package-Manager: Portage-2.3.6, Repoman-2.3.3

 sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild b/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild
index 24ec13e7c2c..19dc6f7d52e 100644
--- a/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild
+++ b/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI="5"
@@ -8,8 +8,7 @@ inherit perl-module git-2
 DESCRIPTION="Perl tools for bioinformatics - Analysis of protein-protein interaction networks"
 HOMEPAGE="http://www.bioperl.org/"
 SRC_URI=""
-EGIT_REPO_URI="git://github.com/bioperl/${PN}.git
-	https://github.com/bioperl/${PN}.git"
+EGIT_REPO_URI="https://github.com/bioperl/${PN}.git"
 
 LICENSE="Artistic GPL-2"
 SLOT="0"

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioperl-network/

[Michał Górny]

commit:     f1b3049e99836b29babc1eaae17eb7c5dba8ce75
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Sun Dec 15 20:18:03 2019 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sun Dec 15 20:24:03 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f1b3049e

sci-biology/bioperl-network: Drop unmaintained -9999

Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 .../bioperl-network/bioperl-network-9999-r1.ebuild | 31 ----------------------
 1 file changed, 31 deletions(-)

diff --git a/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild b/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild
deleted file mode 100644
index 6be8f1cd850..00000000000
--- a/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild
+++ /dev/null
@@ -1,31 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI="5"
-
-inherit perl-module git-2
-
-DESCRIPTION="Perl tools for bioinformatics - Analysis of protein-protein interaction networks"
-HOMEPAGE="http://www.bioperl.org/"
-SRC_URI=""
-EGIT_REPO_URI="https://github.com/bioperl/${PN}.git"
-
-LICENSE="Artistic GPL-2"
-SLOT="0"
-KEYWORDS=""
-IUSE="test"
-RESTRICT="!test? ( test )"
-SRC_TEST="do"
-
-CDEPEND=">=sci-biology/bioperl-${PV}
-	>=dev-perl/Graph-0.86"
-DEPEND="dev-perl/Module-Build
-	${CDEPEND}"
-RDEPEND="${CDEPEND}"
-
-S="${WORKDIR}/BioPerl-network-${PV}"
-
-src_install() {
-	mydoc="AUTHORS BUGS"
-	perl-module_src_install
-}

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioperl-network/

[David Seifert]

commit:     8f07b80fc46fe08be7f759989cf702116444b89e
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Mar 19 17:07:55 2022 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Mar 19 17:07:55 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8f07b80f

sci-biology/bioperl-network: update EAPI 5 -> 8

Closes: https://bugs.gentoo.org/298326
Bug: https://bugs.gentoo.org/835362
Signed-off-by: David Seifert <soap <AT> gentoo.org>

 .../bioperl-network-1.6.9-r1.ebuild                | 26 ++++++++++++++++++
 .../bioperl-network/bioperl-network-1.6.9.ebuild   | 31 ----------------------
 2 files changed, 26 insertions(+), 31 deletions(-)

diff --git a/sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild b/sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild
new file mode 100644
index 000000000000..513429a9e292
--- /dev/null
+++ b/sci-biology/bioperl-network/bioperl-network-1.6.9-r1.ebuild
@@ -0,0 +1,26 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+BIOPERL_RELEASE=1.6.9
+
+DIST_AUTHOR=CJFIELDS
+DIST_NAME=BioPerl-Network
+DIST_VERSION=1.006900
+inherit perl-module
+
+DESCRIPTION="Perl tools for bioinformatics - Analysis of protein-protein interaction networks"
+HOMEPAGE="http://www.bioperl.org/"
+
+SLOT="0"
+KEYWORDS="amd64 x86"
+RESTRICT="test" # bug 298326
+
+RDEPEND="
+	>=sci-biology/bioperl-${PV}
+	>=dev-perl/Graph-0.86"
+DEPEND="${RDEPEND}"
+BDEPEND="dev-perl/Module-Build"
+
+mydoc="AUTHORS BUGS"

diff --git a/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild b/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild
deleted file mode 100644
index 65a72e06634f..000000000000
--- a/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild
+++ /dev/null
@@ -1,31 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI="5"
-
-BIOPERL_RELEASE=1.6.9
-
-MY_PN=BioPerl-Network
-MODULE_AUTHOR=CJFIELDS
-MODULE_VERSION=1.006900
-inherit perl-module
-
-DESCRIPTION="Perl tools for bioinformatics - Analysis of protein-protein interaction networks"
-HOMEPAGE="http://www.bioperl.org/"
-
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="test"
-RESTRICT="!test? ( test )"
-SRC_TEST="do"
-
-CDEPEND=">=sci-biology/bioperl-${PV}
-	>=dev-perl/Graph-0.86"
-DEPEND="dev-perl/Module-Build
-	${CDEPEND}"
-RDEPEND="${CDEPEND}"
-
-src_install() {
-	mydoc="AUTHORS BUGS"
-	perl-module_src_install
-}