From: "Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/ncbi-blast+/
Date: Fri, 28 Apr 2017 17:58:20 +0000 (UTC) [thread overview]
Message-ID: <1493402288.94213c11a5931dfd22ce57afdd7a12b9a40fa402.mmokrejs@gentoo> (raw)
commit: 94213c11a5931dfd22ce57afdd7a12b9a40fa402
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Apr 28 17:58:08 2017 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Apr 28 17:58:08 2017 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=94213c11
sci-biology/ncbi-blast+: version bump
Package-Manager: Portage-2.3.5, Repoman-2.3.2
.../{ncbi-blast+-2.3.0.ebuild => ncbi-blast+-2.6.0.ebuild} | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/sci-biology/ncbi-blast+/ncbi-blast+-2.3.0.ebuild b/sci-biology/ncbi-blast+/ncbi-blast+-2.6.0.ebuild
similarity index 98%
rename from sci-biology/ncbi-blast+/ncbi-blast+-2.3.0.ebuild
rename to sci-biology/ncbi-blast+/ncbi-blast+-2.6.0.ebuild
index 7791cf3e5..6adbefad3 100644
--- a/sci-biology/ncbi-blast+/ncbi-blast+-2.3.0.ebuild
+++ b/sci-biology/ncbi-blast+/ncbi-blast+-2.6.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -239,7 +239,9 @@ src_configure() {
$(use_with mesa mesa "${EPREFIX}/usr")
$(use_with opengl glut "${EPREFIX}/usr")
$(use_with opengl glew "${EPREFIX}/usr")
- $(use_with opengl glew-mx)
+ #
+ # GLEW 2.0 dropped support for this, see https://bugs.gentoo.org/show_bug.cgi?id=611302
+ # $(use_with opengl glew-mx)
$(use_with wxwidgets wxwidgets "${EPREFIX}/usr")
$(use_with wxwidgets wxwidgets-ucs)
$(use_with freetype freetype "${EPREFIX}/usr")
@@ -264,6 +266,8 @@ src_configure() {
$(use_with curl curl "${EPREFIX}/usr")
# $(use_with X x "${EPREFIX}/usr")
# $(use_with X x) # there is no --with-x option
+ # prevent downloading VDB sources from https://github.com/ncbi/ncbi-vdb.git during configure execution
+ --without-vdb
)
# http://www.ncbi.nlm.nih.gov/books/NBK7167/
next reply other threads:[~2017-04-28 17:58 UTC|newest]
Thread overview: 23+ messages / expand[flat|nested] mbox.gz Atom feed top
2017-04-28 17:58 Martin Mokrejs [this message]
-- strict thread matches above, loose matches on Subject: below --
2022-01-25 19:15 [gentoo-commits] proj/sci:master commit in: sci-biology/ncbi-blast+/ Andrew Ammerlaan
2021-12-16 11:07 Andrew Ammerlaan
2021-08-31 9:45 Andrew Ammerlaan
2021-07-03 10:44 Andrew Ammerlaan
2021-03-16 18:57 Andrew Ammerlaan
2021-03-16 18:57 Andrew Ammerlaan
2021-02-01 4:36 Andrew Ammerlaan
2021-01-19 17:16 Andrew Ammerlaan
2021-01-19 16:26 Andrew Ammerlaan
2021-01-13 21:06 Andrew Ammerlaan
2021-01-10 19:09 Andrew Ammerlaan
2021-01-05 18:22 Andrew Ammerlaan
2019-03-28 21:54 Martin Mokrejs
2019-03-25 12:16 Martin Mokrejs
2016-09-10 17:25 Justin Lecher
2016-08-24 11:40 Justin Lecher
2016-08-24 11:40 Justin Lecher
2016-02-11 18:53 Martin Mokrejs
2016-01-06 8:49 Justin Lecher
2015-07-17 0:40 Andrew Savchenko
2015-02-18 16:41 Justin Lecher
2015-01-15 17:00 Christoph Junghans
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