[gentoo-commits] repo/gentoo:master commit in: sci-biology/rebase/

["Justin Lecher" <jlec@gentoo.org>]

commit:     17770b8dbcc2c7e3ddb44f5a22c25688304f0e6a
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Apr 23 17:17:19 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Apr 23 17:17:28 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=17770b8d

sci-biology/rebase: Version Bump

Package-Manager: Portage-2.3.5, Repoman-2.3.2
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/rebase/Manifest           |  1 +
 sci-biology/rebase/rebase-1704.ebuild | 45 +++++++++++++++++++++++++++++++++++
 2 files changed, 46 insertions(+)

diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 25a0097b757..d3ad3466d24 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,3 +1,4 @@
 DIST rebase-1701.tar.xz 120604368 SHA256 cc8cf90f874dcb179b9f7654780ff783066fa6a67fffb90d6ac08d2917fa671b SHA512 1833db9d78508bbd5317f9b42b0e8129096f1695d5a14d5e2b6043bc94091a76ac404c576ad622be4e32c46aff7975a7ec3e36c3da71ce3ce1665868ee0d77cb WHIRLPOOL 641b755b92e8aa9ca2d9a69760d0414a95f38512fa235a9856a953398d5ab0c853bb4743f6790aada1d90f968bfaa76c0651aadea842fff9700941c506a29ecd
 DIST rebase-1702.tar.xz 117583312 SHA256 f010388af45a58c9f40270240c65fd5a82a1fce27b1f1eb0d1fbe4b3ffd20966 SHA512 3bba0738840b966a0a58123f265de1951428c599f3af9c581e1becec17ba3a93233a231de0673dbb2dc0bb82d54096e0eed43846967bf232f412bb785ce3b23f WHIRLPOOL 70aeede45b1795fc8cc634675381d4458b32445016139d17ac5b9951cf2ff54bbc0fa50d91bf49bbed19d250553275e3c1b15cf0de5149e36d3e1567c74031ec
 DIST rebase-1703.tar.xz 122252304 SHA256 dbd5fa2751b693b1babcef9c69a6f7a9e539550aeea712c569dcc0f9a93998e3 SHA512 838bf5e09073ff8520403d955a8195298def1d792d1fd3044e7c8896c6202a0340c1e96dbe80e85c5801cd3be3ed63f19488101cca02d46cdf5f1d0521ede796 WHIRLPOOL b42693781f5faa8a2dbd15204d8f1fc2dc08fb233fa536bd3c0405799059b830c8be214d34f54e2645c8c20e7bd1359882167d175a5026a8acbea29b4f00208c
+DIST rebase-1704.tar.xz 124351900 SHA256 0622cf14241a4d0d725cb149378d5b2a5aa6094968afcf3f70b8025fba1cfd6b SHA512 0e4019d41ccbae86b8cb1f6dfa4c34d3fccbe084a330f04f2fdb774186e35c761655e1619d9a90d444ea3bab0910df1b60cf9a249ee31d66a254d28dd6b32cc7 WHIRLPOOL 161f04c90c1eb290625ff0ee202f78c2b1fb9c60ac5874ca11568927e4f7ea23c6a9fed42a509b1350d0b267ecb8ffa06fa4f1d38e4da0aba28ad540ea749c6c

diff --git a/sci-biology/rebase/rebase-1704.ebuild b/sci-biology/rebase/rebase-1704.ebuild
new file mode 100644
index 00000000000..70694cf2ca8
--- /dev/null
+++ b/sci-biology/rebase/rebase-1704.ebuild
@@ -0,0 +1,45 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+	if use emboss; then
+		echo; einfo "Indexing Rebase for usage with EMBOSS."
+		mkdir REBASE || die
+		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+				-protofile proto.${MY_PV} -equivalences \
+				|| die "Indexing Rebase failed."
+		echo
+	fi
+}
+
+src_install() {
+	if ! use minimal; then
+		insinto /usr/share/${PN}
+		doins withrefm.${MY_PV} proto.${MY_PV}
+	fi
+	newdoc REBASE.DOC README
+	if use emboss; then
+		insinto /usr/share/EMBOSS/data/REBASE
+		doins REBASE/embossre.{enz,ref,sup}
+		insinto /usr/share/EMBOSS/data
+		doins REBASE/embossre.equ
+	fi
+}