From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id BE03F139695 for ; Fri, 14 Apr 2017 17:17:31 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 07E9AE0D04; Fri, 14 Apr 2017 17:17:30 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id D5930E0D04 for ; Fri, 14 Apr 2017 17:17:29 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 2150234162D for ; Fri, 14 Apr 2017 17:17:28 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 8A16A7427 for ; Fri, 14 Apr 2017 17:17:26 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1492190240.2ddeb5981f5bbc80372aec79547a739ef1b1245f.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/VarScan/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/VarScan/VarScan-2.4.2.ebuild sci-biology/VarScan/VarScan-2.4.3.ebuild X-VCS-Directories: sci-biology/VarScan/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 2ddeb5981f5bbc80372aec79547a739ef1b1245f X-VCS-Branch: master Date: Fri, 14 Apr 2017 17:17:26 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 694e784c-15a9-4ab0-9b0d-060085762912 X-Archives-Hash: 432de1f73b5059ff90900fb996dc2fa7 commit: 2ddeb5981f5bbc80372aec79547a739ef1b1245f Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Fri Apr 14 17:17:20 2017 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Fri Apr 14 17:17:20 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=2ddeb598 sci-biology/VarScan: add RDEPEND on bam-readcount Package-Manager: Portage-2.3.5, Repoman-2.3.2 sci-biology/VarScan/VarScan-2.4.2.ebuild | 5 +++-- sci-biology/VarScan/VarScan-2.4.3.ebuild | 3 ++- 2 files changed, 5 insertions(+), 3 deletions(-) diff --git a/sci-biology/VarScan/VarScan-2.4.2.ebuild b/sci-biology/VarScan/VarScan-2.4.2.ebuild index 36af35941..4add5f679 100644 --- a/sci-biology/VarScan/VarScan-2.4.2.ebuild +++ b/sci-biology/VarScan/VarScan-2.4.2.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2016 Gentoo Foundation +# Copyright 1999-2017 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 EAPI=5 @@ -21,7 +21,8 @@ IUSE="" DEPEND=" >=virtual/jdk-1.5:* !sci-biology/VarScan-bin" -RDEPEND=">=virtual/jre-1.5:*" +RDEPEND=">=virtual/jre-1.5:* + sci-biology/bam-readcount" S="${WORKDIR}"/net/sf/varscan diff --git a/sci-biology/VarScan/VarScan-2.4.3.ebuild b/sci-biology/VarScan/VarScan-2.4.3.ebuild index 8c42848c1..0b3fc2ad5 100644 --- a/sci-biology/VarScan/VarScan-2.4.3.ebuild +++ b/sci-biology/VarScan/VarScan-2.4.3.ebuild @@ -20,7 +20,8 @@ IUSE="" DEPEND=" >=virtual/jdk-1.5:* !sci-biology/VarScan-bin" -RDEPEND=">=virtual/jre-1.5:*" +RDEPEND=">=virtual/jre-1.5:* + sci-biology/bam-readcount" S="${WORKDIR}"/net/sf/varscan