[gentoo-commits] repo/gentoo:master commit in: sci-biology/transfac/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/transfac/

[David Seifert]

commit:     5d9128bb235538e20ab004fae572007f8084562d
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sun Feb 19 18:41:36 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sun Feb 19 18:43:39 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5d9128bb

sci-biology/transfac: Drop to unstable

Package-Manager: Portage-2.3.3, Repoman-2.3.1
Closes: https://github.com/gentoo/gentoo/pull/3937

 sci-biology/transfac/transfac-3.2.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/transfac/transfac-3.2.ebuild b/sci-biology/transfac/transfac-3.2.ebuild
index f35476ca5a..9b6e76ce87 100644
--- a/sci-biology/transfac/transfac-3.2.ebuild
+++ b/sci-biology/transfac/transfac-3.2.ebuild
@@ -8,7 +8,7 @@ SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z"
 LICENSE="public-domain"
 
 SLOT="3"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
 IUSE="emboss minimal"
 # Minimal build keeps only the indexed files (if applicable) and the documentation.
 # The non-indexed database is not installed.

[gentoo-commits] repo/gentoo:master commit in: sci-biology/transfac/

[David Seifert]

commit:     5baee74fbdce4cfcfc16da6700c613ddaa770cbb
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Feb 25 20:09:17 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Feb 25 20:10:20 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5baee74f

sci-biology/transfac: Modernise to EAPI 6

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 ...{transfac-3.2.ebuild => transfac-3.2-r1.ebuild} | 27 ++++++++++++----------
 1 file changed, 15 insertions(+), 12 deletions(-)

diff --git a/sci-biology/transfac/transfac-3.2.ebuild b/sci-biology/transfac/transfac-3.2-r1.ebuild
similarity index 77%
rename from sci-biology/transfac/transfac-3.2.ebuild
rename to sci-biology/transfac/transfac-3.2-r1.ebuild
index 9b6e76ce87..7c98be79ed 100644
--- a/sci-biology/transfac/transfac-3.2.ebuild
+++ b/sci-biology/transfac/transfac-3.2-r1.ebuild
@@ -2,40 +2,43 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
+EAPI=6
+
 DESCRIPTION="A database of eucaryotic transcription factors"
 HOMEPAGE="http://www.gene-regulation.com/pub/databases.html"
 SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z"
-LICENSE="public-domain"
 
+LICENSE="public-domain"
 SLOT="3"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="emboss minimal"
 # Minimal build keeps only the indexed files (if applicable) and the documentation.
 # The non-indexed database is not installed.
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="emboss minimal"
 
 DEPEND="emboss? ( sci-biology/emboss )"
-
 RDEPEND="${DEPEND}"
 
-S="${WORKDIR}"
+S=${WORKDIR}
 
 src_compile() {
 	if use emboss; then
-		echo
-		einfo "Indexing TRANSFAC for usage with EMBOSS."
-		EMBOSS_DATA=. tfextract -auto -infile class.dat  || die \
-			"Indexing TRANSFAC failed."
-		echo
+		einfo
+		einfo "Indexing TRANSFAC for usage with EMBOSS"
+		EMBOSS_DATA="." tfextract -auto -infile class.dat || die "Indexing TRANSFAC failed"
+		einfo
 	fi
 }
 
 src_install() {
+	newdoc readme.txt README
+
 	if ! use minimal; then
 		insinto /usr/share/${PN}-${SLOT}
-		doins *.dat || die
+		doins *.dat
 	fi
+
 	if use emboss; then
 		insinto /usr/share/EMBOSS/data
-		doins tf* || die
+		doins tf*
 	fi
 }

[gentoo-commits] repo/gentoo:master commit in: sci-biology/transfac/

[David Seifert]

commit:     4345375f01e657175dc4e9199884ffbea67d68e5
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Thu Jul  7 19:57:13 2022 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Thu Jul  7 19:57:13 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4345375f

sci-biology/transfac: update EAPI 6 -> 8

Signed-off-by: David Seifert <soap <AT> gentoo.org>

 .../{transfac-3.2-r1.ebuild => transfac-3.2-r2.ebuild}      | 13 ++++++-------
 1 file changed, 6 insertions(+), 7 deletions(-)

diff --git a/sci-biology/transfac/transfac-3.2-r1.ebuild b/sci-biology/transfac/transfac-3.2-r2.ebuild
similarity index 84%
rename from sci-biology/transfac/transfac-3.2-r1.ebuild
rename to sci-biology/transfac/transfac-3.2-r2.ebuild
index 91b16f4b4fe4..2fce474da2ad 100644
--- a/sci-biology/transfac/transfac-3.2-r1.ebuild
+++ b/sci-biology/transfac/transfac-3.2-r2.ebuild
@@ -1,11 +1,12 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=8
 
 DESCRIPTION="A database of eucaryotic transcription factors"
 HOMEPAGE="http://www.gene-regulation.com/pub/databases.html"
 SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z"
+S="${WORKDIR}"
 
 LICENSE="public-domain"
 SLOT="3"
@@ -14,10 +15,8 @@ SLOT="3"
 KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
 IUSE="emboss minimal"
 
-DEPEND="emboss? ( sci-biology/emboss )"
-RDEPEND="${DEPEND}"
-
-S=${WORKDIR}
+BDEPEND="emboss? ( sci-biology/emboss )"
+RDEPEND="${BDEPEND}"
 
 src_compile() {
 	if use emboss; then
@@ -32,7 +31,7 @@ src_install() {
 	newdoc readme.txt README
 
 	if ! use minimal; then
-		insinto /usr/share/${PN}-${SLOT}
+		insinto /usr/share/transfac-${SLOT}
 		doins *.dat
 	fi