[gentoo-commits] repo/gentoo:master commit in: sci-biology/kalign/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/kalign/

[David Seifert]

commit:     be81909256c71d238243efde2f27c55e4595e7cf
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Feb 25 15:48:34 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Feb 25 15:49:07 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=be819092

sci-biology/kalign: Modernise to EAPI 6

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/kalign/kalign-2.03-r2.ebuild | 34 ++++++++++++++++++++++++++++++++
 1 file changed, 34 insertions(+)

diff --git a/sci-biology/kalign/kalign-2.03-r2.ebuild b/sci-biology/kalign/kalign-2.03-r2.ebuild
new file mode 100644
index 0000000000..0693f82344
--- /dev/null
+++ b/sci-biology/kalign/kalign-2.03-r2.ebuild
@@ -0,0 +1,34 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+inherit toolchain-funcs
+
+DESCRIPTION="Global and progressive multiple sequence alignment"
+HOMEPAGE="http://msa.cgb.ki.se/"
+SRC_URI="mirror://debian/pool/main/k/kalign/${PN}_${PV}.orig.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+S=${WORKDIR}/${PN}
+
+src_prepare() {
+	default
+	sed \
+		-e "s/\$(CFLAGS) \$(OBJECTS)/\$(LDFLAGS) &/" \
+		-i Makefile.in || die
+}
+
+src_compile() {
+	emake CC="$(tc-getCC)" CFLAGS="${CFLAGS}"
+}
+
+src_install() {
+	dobin ${PN}
+	einstalldocs
+}

[gentoo-commits] repo/gentoo:master commit in: sci-biology/kalign/

[David Seifert]

commit:     fb9c1c3021f17407befffb37c8119045a029627b
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Feb 25 16:35:43 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Feb 25 17:12:59 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=fb9c1c30

sci-biology/kalign: Remove old

Package-Manager: Portage-2.3.3, Repoman-2.3.1
Closes: https://github.com/gentoo/gentoo/pull/4076

 sci-biology/kalign/kalign-2.03-r1.ebuild | 33 --------------------------------
 sci-biology/kalign/kalign-2.03.ebuild    | 27 --------------------------
 2 files changed, 60 deletions(-)

diff --git a/sci-biology/kalign/kalign-2.03-r1.ebuild b/sci-biology/kalign/kalign-2.03-r1.ebuild
deleted file mode 100644
index 4422bad730..0000000000
--- a/sci-biology/kalign/kalign-2.03-r1.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-inherit toolchain-funcs
-
-DESCRIPTION="Global and progressive multiple sequence alignment"
-HOMEPAGE="http://msa.cgb.ki.se/"
-SRC_URI="mirror://debian/pool/main/k/kalign/${PN}_${PV}.orig.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86"
-
-S="${WORKDIR}"/${PN}
-
-src_prepare() {
-	sed \
-		-e "s/\$(CFLAGS) \$(OBJECTS)/\$(LDFLAGS) &/" \
-		-i Makefile.in || die
-}
-
-src_compile() {
-	emake CC="$(tc-getCC)" CFLAGS="${CFLAGS}"
-}
-
-src_install() {
-	dobin ${PN}
-	dodoc README
-}

diff --git a/sci-biology/kalign/kalign-2.03.ebuild b/sci-biology/kalign/kalign-2.03.ebuild
deleted file mode 100644
index 3862e49eaf..0000000000
--- a/sci-biology/kalign/kalign-2.03.ebuild
+++ /dev/null
@@ -1,27 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-DESCRIPTION="Global and progressive multiple sequence alignment"
-HOMEPAGE="http://msa.cgb.ki.se/"
-SRC_URI="mirror://debian/pool/main/k/kalign/${PN}_${PV}.orig.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86"
-
-DEPEND=""
-RDEPEND=""
-
-S="${WORKDIR}/${PN}"
-
-src_unpack() {
-	unpack ${A}
-	sed -i 's/^CFLAGS.*= -O9/CFLAGS := ${CFLAGS} -O3/' "${S}"/Makefile.in
-}
-
-src_install() {
-	dobin kalign
-	dodoc README
-}