From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: <gentoo-commits+bounces-933162-garchives=archives.gentoo.org@lists.gentoo.org> Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 277C0139694 for <garchives@archives.gentoo.org>; Mon, 20 Feb 2017 22:10:25 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 6868DE0D2C; Mon, 20 Feb 2017 22:10:21 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 432EDE0D2C for <gentoo-commits@lists.gentoo.org>; Mon, 20 Feb 2017 22:10:21 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id E7BAD340FE2 for <gentoo-commits@lists.gentoo.org>; Mon, 20 Feb 2017 22:10:19 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id BD5954ED5 for <gentoo-commits@lists.gentoo.org>; Mon, 20 Feb 2017 22:10:12 +0000 (UTC) From: "David Seifert" <soap@gentoo.org> To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "David Seifert" <soap@gentoo.org> Message-ID: <1487628602.f9fe558786e5afc92cfe86f3a0060e64f2acdeeb.soap@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/allpathslg/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-biology/allpathslg/Manifest sci-biology/allpathslg/allpathslg-42337.ebuild X-VCS-Directories: sci-biology/allpathslg/ X-VCS-Committer: soap X-VCS-Committer-Name: David Seifert X-VCS-Revision: f9fe558786e5afc92cfe86f3a0060e64f2acdeeb X-VCS-Branch: master Date: Mon, 20 Feb 2017 22:10:12 +0000 (UTC) Precedence: bulk List-Post: <mailto:gentoo-commits@lists.gentoo.org> List-Help: <mailto:gentoo-commits+help@lists.gentoo.org> List-Unsubscribe: <mailto:gentoo-commits+unsubscribe@lists.gentoo.org> List-Subscribe: <mailto:gentoo-commits+subscribe@lists.gentoo.org> List-Id: Gentoo Linux mail <gentoo-commits.gentoo.org> X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 7e00678e-2e55-4869-8e79-6a7f246628d2 X-Archives-Hash: 64e67fc1b9c28996f7477a5cd268da06 commit: f9fe558786e5afc92cfe86f3a0060e64f2acdeeb Author: David Seifert <soap <AT> gentoo <DOT> org> AuthorDate: Mon Feb 20 22:07:05 2017 +0000 Commit: David Seifert <soap <AT> gentoo <DOT> org> CommitDate: Mon Feb 20 22:10:02 2017 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f9fe5587 sci-biology/allpathslg: Remove old Package-Manager: Portage-2.3.3, Repoman-2.3.1 sci-biology/allpathslg/Manifest | 1 - sci-biology/allpathslg/allpathslg-42337.ebuild | 35 -------------------------- 2 files changed, 36 deletions(-) diff --git a/sci-biology/allpathslg/Manifest b/sci-biology/allpathslg/Manifest index cd18242ec5..c87071a889 100644 --- a/sci-biology/allpathslg/Manifest +++ b/sci-biology/allpathslg/Manifest @@ -1,2 +1 @@ -DIST allpathslg-42337.tar.gz 2739498 SHA256 a2c8f64f6ba1705b2331ca07761d189183c6745f8717ffc67ee98e9e3ca3dba6 SHA512 7595fbe14a5029578b57d16f781cbb2a0f0ad6b1af2dd770e2274f8fe2e11d0013fdff12cc85c1be748e769ffb23b7d5fe30920feef38e0e8b947d05b8bda31c WHIRLPOOL 79bda55d49877641eb55630950472a06d8f25db467dbfecde8b4d04c3ce16c071d32dd312fa9a0f72723bf4caa8f9b1d0346acf438b9671b4bed2c0672c788b9 DIST allpathslg-52488.tar.gz 3121949 SHA256 035b49cb21b871a6b111976757d7aee9c2513dd51af04678f33375e620998542 SHA512 c44ef1a3ed5b343bf096663309cc399e79d65e83175232743cf330fd0d426633bd0d388922fd0c73ac0927d85ea9005549c8e4f7711c79fea7107068510ef30d WHIRLPOOL c63a13450c55fce8f2c5399bdd5d8f32939e31d9d13a120835b1d826ae96e251fea81caa134d5d45ad857af0777c22e4ad1d894c81a74db6d83a7d9ad83b12b4 diff --git a/sci-biology/allpathslg/allpathslg-42337.ebuild b/sci-biology/allpathslg/allpathslg-42337.ebuild deleted file mode 100644 index 9fb44dfcc9..0000000000 --- a/sci-biology/allpathslg/allpathslg-42337.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=4 - -inherit autotools flag-o-matic - -DESCRIPTION="De novo assembly of whole-genome shotgun microreads" -HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd" -SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz" - -LICENSE="MIT" -SLOT="0" -IUSE="" -KEYWORDS="amd64 -x86" - -DEPEND=" - dev-libs/boost - !sci-biology/allpaths - sci-biology/vaal" -RDEPEND="" - -src_prepare() { - sed -i 's/-ggdb3//' configure.ac || die - eautoreconf -} - -src_install() { - einstall || die - # Provided by sci-biology/vaal - for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do - rm "${D}/usr/bin/$i" || die - done -}