[gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/

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* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-02-14 18:48 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-02-14 18:48 UTC (permalink / raw
  To: gentoo-commits

commit:     416bfc9b541301fbbb67d35f5d89c2b05b44f168
Author:     Martin Mokrejs <mmokrejs <AT> gentoo <DOT> org>
AuthorDate: Mon Feb 14 18:47:51 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Feb 14 18:47:51 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=416bfc9b

sci-biology/tablet-bin: version bump

(Portage version: 2.1.9.28/git/Linux i686, unsigned Manifest commit)

---
 ...0.09.20.ebuild => tablet-bin-1.11.01.25.ebuild} |    4 ++--
 1 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.10.09.20.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.01.25.ebuild
similarity index 94%
rename from sci-biology/tablet-bin/tablet-bin-1.10.09.20.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.11.01.25.ebuild
index bc176a7..2cf7b27 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.10.09.20.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.01.25.ebuild
@@ -6,7 +6,7 @@ EAPI=3
 
 DESCRIPTION="Graphical viewer for next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
-SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_10_09_20.sh
+SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_11_01_25.sh
 		http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
 
 # Tablet uses a modified version of the BSD License which has been edited to remove references to distribution and use in source forms. This means that we are happy for you to distribute and use Tablet however you please, but we do not (yet) want to make the source code publicly available.
@@ -25,6 +25,6 @@ RDEPEND="${DEPEND}
 src_install() {
 	# In theory it seems this binary package could be installed through ant instead of the install4j package which is not easy to be forced non-interactive. The below approach is not ideal.
 	sed "s#\"\${D}\"#"${D}"#g" "${FILESDIR}"/response.varfile > "${DISTDIR}"/response.varfile || die "sed failed"
-	sh "${DISTDIR}"/tablet_linux_x86_1_10_09_20.sh -q -overwrite --var-file="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet
+	sh "${DISTDIR}"/tablet_linux_x86_1_11_01_25.sh -q -overwrite --var-file="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet
 	dobin "${DISTDIR}"/coveragestats.py || die
 }



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-05-04  0:13 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-05-04  0:13 UTC (permalink / raw
  To: gentoo-commits

commit:     862f6636be370018e0330c2ac4c2f2747f30b762
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed May  4 00:13:13 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed May  4 00:13:13 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=862f6636

sci-biology/tablet-bin: removed references to my /scratch filesystem

(Portage version: 2.1.9.43/git/Linux i686, unsigned Manifest commit)

---
 .../tablet-bin/tablet-bin-1.11.02.18.ebuild        |    4 ++--
 1 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.02.18.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.02.18.ebuild
index d4b1925..e5682e7 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.02.18.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.02.18.ebuild
@@ -44,7 +44,7 @@ src_install() {
 	# disable the installation process to symlink from /usr/local/bin/table to
 	# /opt/Tablet/tablet. That was logged in that file with the following line:
 	#
-	# /scratch/var/tmp/portage/sci-biology/tablet-bin-1.11.02.18/image/opt/Tablet/.install4j/installation.log: Variable changed: sys.symlinkDir=/usr/local/bin[class java.lang.String]
+	# /var/tmp/portage/sci-biology/tablet-bin-1.11.02.18/image/opt/Tablet/.install4j/installation.log: Variable changed: sys.symlinkDir=/usr/local/bin[class java.lang.String]
 	#
 	# The file is then left on the installed system in "${D}"/opt/Tablet/.install4j/response.varfile
 	mkdir -p "${D}"/opt/Tablet/.install4j || die "Cannot pre-create	"${D}"/opt/Tablet/.install4j/"
@@ -54,6 +54,6 @@ src_install() {
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
 	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${D}"/../temp -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_1_11_02_18.sh || die "failed to set userHome value"
-	sh "${DISTDIR}"/tablet_linux_x86_1_11_02_18.sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir /scratch/var/tmp/portage/sci-biology/tablet-bin-1.11.02.18/image/opt/Tablet
+	sh "${DISTDIR}"/tablet_linux_x86_1_11_02_18.sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet
 	dobin "${DISTDIR}"/coveragestats.py
 }



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-05-04  0:28 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-05-04  0:28 UTC (permalink / raw
  To: gentoo-commits

commit:     08ebfcbb90d5172dd9d95d99a675e6e59265e47b
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed May  4 00:20:57 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed May  4 00:20:57 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=08ebfcbb

sci-biology/tablet-bin: version bump

(Portage version: 2.1.9.43/git/Linux i686, unsigned Manifest commit)

---
 ...1.02.18.ebuild => tablet-bin-1.11.05.03.ebuild} |    4 ++--
 1 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.02.18.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
similarity index 97%
rename from sci-biology/tablet-bin/tablet-bin-1.11.02.18.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
index e5682e7..8078efc 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.02.18.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
@@ -8,7 +8,7 @@ inherit python java-pkg-2
 
 DESCRIPTION="Graphical viewer for next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
-SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_11_02_18.sh
+SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_11_05_03.sh
 		http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
 
 # Tablet uses a modified version of the BSD License which has been edited to remove
@@ -53,7 +53,7 @@ src_install() {
 	# make sure we force java to point a to $HOME which is inside our sanbox
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
-	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${D}"/../temp -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_1_11_02_18.sh || die "failed to set userHome value"
+	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${D}"/../temp -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_1_11_05_03.sh || die "failed to set userHome value"
 	sh "${DISTDIR}"/tablet_linux_x86_1_11_02_18.sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet
 	dobin "${DISTDIR}"/coveragestats.py
 }



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-05-04  0:28 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-05-04  0:28 UTC (permalink / raw
  To: gentoo-commits

commit:     5d2329cce640f5a246c69311607b52514236dfd9
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed May  4 00:27:52 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed May  4 00:27:52 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5d2329cc

sci-biology/tablet-bin: added missing die call

(Portage version: 2.1.9.43/git/Linux i686, unsigned Manifest commit)

---
 .../tablet-bin/tablet-bin-1.11.05.03.ebuild        |    2 +-
 1 files changed, 1 insertions(+), 1 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
index 8078efc..5f066d6 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
@@ -54,6 +54,6 @@ src_install() {
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
 	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${D}"/../temp -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_1_11_05_03.sh || die "failed to set userHome value"
-	sh "${DISTDIR}"/tablet_linux_x86_1_11_02_18.sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet
+	sh "${DISTDIR}"/tablet_linux_x86_1_11_05_03.sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet || die "Failed to run the self-extracting exe file"
 	dobin "${DISTDIR}"/coveragestats.py
 }



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-06-24 17:09 Justin Lecher
  0 siblings, 0 replies; 26+ messages in thread
From: Justin Lecher @ 2011-06-24 17:09 UTC (permalink / raw
  To: gentoo-commits

commit:     76f2d3edd1209d5cc1b52a771346f708ab72c08e
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 24 12:55:16 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Jun 24 12:55:16 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=76f2d3ed

Sort inherit and/or USE

(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 .../tablet-bin/tablet-bin-1.11.05.03.ebuild        |    2 +-
 1 files changed, 1 insertions(+), 1 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
index 5f066d6..49983e3 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
@@ -4,7 +4,7 @@
 
 EAPI=3
 
-inherit python java-pkg-2
+inherit java-pkg-2 python
 
 DESCRIPTION="Graphical viewer for next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-12-09 16:41 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-12-09 16:41 UTC (permalink / raw
  To: gentoo-commits

commit:     bd1e14187a928b3e425778bed63f44b2f5d721c8
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Dec  9 16:41:05 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Dec  9 16:41:05 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=bd1e1418

sci-biology/tablet-bin: ebuild cleanup, version bump

(Portage version: 2.1.10.38/git/Linux i686, unsigned Manifest commit)

---
 sci-biology/tablet-bin/ChangeLog                   |   10 +++++++
 .../tablet-bin/tablet-bin-1.11.05.03.ebuild        |   27 +++++++++++---------
 ...1.05.03.ebuild => tablet-bin-1.11.11.01.ebuild} |   27 +++++++++++---------
 3 files changed, 40 insertions(+), 24 deletions(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
new file mode 100644
index 0000000..92c48b6
--- /dev/null
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/tablet-bin
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*tablet-bin-1.11.11.01 (09 Dec 2011)
+
+  09 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  tablet-bin-1.11.05.03.ebuild, +tablet-bin-1.11.11.01.ebuild:
+  ebuild cleanup, version bump
+

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
index 49983e3..32cc463e 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
@@ -6,19 +6,22 @@ EAPI=3
 
 inherit java-pkg-2 python
 
-DESCRIPTION="Graphical viewer for next generation sequence assemblies and alignments."
+DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
 SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_11_05_03.sh
 		http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
 
-# Tablet uses a modified version of the BSD License which has been edited to remove
-# references to distribution and use in source forms. This means that we are happy
-# for you to distribute and use Tablet however you please, but we do not (yet) want
-# to make the source code publicly available.
+# Upstream says regarding source code unavailability:
+# Tablet uses a modified version of the BSD License which has been edited to
+# remove references to distribution and use in source forms. This means that
+# we are happy for you to distribute and use Tablet however you please, but we
+# do not (yet) want to make the source code publicly available.
 
-# It's in the installer, and ends up on disk after installation at /opt/Tablet/docs/tablet.html
-# The original BSD licence was modified to remove references to distribution and use in
-# source forms, because we cannot make the source code available for Tablet.
+# The licence file itself is in the installer, and ends up on disk after
+# installation at /opt/Tablet/docs/tablet.html
+# The original BSD licence was modified to remove references to distribution
+# and use in source forms, because we cannot make the source code available
+# for Tablet.
 
 LICENSE="Tablet"
 SLOT="0"
@@ -31,13 +34,13 @@ RDEPEND="${DEPEND}
 		dev-lang/python"
 
 src_install() {
-	# In theory it seems this binary package could be installed through ant instead
-	# of the install4j package which is not easy to be forced non-interactive.
-	# The below approach is not ideal.
+	# In theory it seems this binary package could be installed through ant
+	# instead of the install4j package which is not easy to be forced
+	# non-interactive. The below approach via install4j is not ideal but works.
 	sed "s#\"\${D}\"#"${D}"#g" "${FILESDIR}"/response.varfile > "${DISTDIR}"/response.varfile || die "sed failed"
 
 	# the intallation script somehow does not pickup
-	# -varfile="${DISTDIR}"/response.varfile from the commandline and tehrefore
+	# -varfile="${DISTDIR}"/response.varfile from the commandline and therefore
 	# we place the file rather directly into the place where it should reside.
 	# In the file you can read details how the variables were mangled. For
 	# example, the trick with sys.symlinkDir in the response.varfile is to

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
similarity index 76%
copy from sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
copy to sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
index 49983e3..32cc463e 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.05.03.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
@@ -6,19 +6,22 @@ EAPI=3
 
 inherit java-pkg-2 python
 
-DESCRIPTION="Graphical viewer for next generation sequence assemblies and alignments."
+DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
 SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_11_05_03.sh
 		http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
 
-# Tablet uses a modified version of the BSD License which has been edited to remove
-# references to distribution and use in source forms. This means that we are happy
-# for you to distribute and use Tablet however you please, but we do not (yet) want
-# to make the source code publicly available.
+# Upstream says regarding source code unavailability:
+# Tablet uses a modified version of the BSD License which has been edited to
+# remove references to distribution and use in source forms. This means that
+# we are happy for you to distribute and use Tablet however you please, but we
+# do not (yet) want to make the source code publicly available.
 
-# It's in the installer, and ends up on disk after installation at /opt/Tablet/docs/tablet.html
-# The original BSD licence was modified to remove references to distribution and use in
-# source forms, because we cannot make the source code available for Tablet.
+# The licence file itself is in the installer, and ends up on disk after
+# installation at /opt/Tablet/docs/tablet.html
+# The original BSD licence was modified to remove references to distribution
+# and use in source forms, because we cannot make the source code available
+# for Tablet.
 
 LICENSE="Tablet"
 SLOT="0"
@@ -31,13 +34,13 @@ RDEPEND="${DEPEND}
 		dev-lang/python"
 
 src_install() {
-	# In theory it seems this binary package could be installed through ant instead
-	# of the install4j package which is not easy to be forced non-interactive.
-	# The below approach is not ideal.
+	# In theory it seems this binary package could be installed through ant
+	# instead of the install4j package which is not easy to be forced
+	# non-interactive. The below approach via install4j is not ideal but works.
 	sed "s#\"\${D}\"#"${D}"#g" "${FILESDIR}"/response.varfile > "${DISTDIR}"/response.varfile || die "sed failed"
 
 	# the intallation script somehow does not pickup
-	# -varfile="${DISTDIR}"/response.varfile from the commandline and tehrefore
+	# -varfile="${DISTDIR}"/response.varfile from the commandline and therefore
 	# we place the file rather directly into the place where it should reside.
 	# In the file you can read details how the variables were mangled. For
 	# example, the trick with sys.symlinkDir in the response.varfile is to



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-12-09 16:53 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-12-09 16:53 UTC (permalink / raw
  To: gentoo-commits

commit:     0357676f881aed827670b2fd0f80c39ccd01deff
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Dec  9 16:53:21 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Dec  9 16:53:21 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=0357676f

sci-biology/tablet-bin: ebuild cleanup, version bump

---
 .../tablet-bin/tablet-bin-1.11.11.01.ebuild        |    2 +-
 1 files changed, 1 insertions(+), 1 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
index 32cc463e..cd5141d 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
@@ -8,7 +8,7 @@ inherit java-pkg-2 python
 
 DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
-SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_11_05_03.sh
+SRC_URI="http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_1_11_11_01.sh
 		http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
 
 # Upstream says regarding source code unavailability:



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* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-12-12 10:49 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-12-12 10:49 UTC (permalink / raw
  To: gentoo-commits

commit:     42c602ccec69da7793ac77c9796766cfd45eb1ce
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Dec 12 10:49:26 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Dec 12 10:49:26 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=42c602cc

added MYPV to the ebuild to make it more easily re-usable

(Portage version: 2.1.10.38/git/Linux i686, unsigned Manifest commit)

---
 sci-biology/tablet-bin/ChangeLog                   |    5 +++++
 .../tablet-bin/tablet-bin-1.11.11.01.ebuild        |    6 ++++--
 2 files changed, 9 insertions(+), 2 deletions(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index 92c48b6..7179b14 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -2,6 +2,11 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  12 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  tablet-bin-1.11.11.01.ebuild:
+  added MYPV to the ebuild to make it more easily re-usable
+  tablet-bin-1.11.11.01.ebuild
+
 *tablet-bin-1.11.11.01 (09 Dec 2011)
 
   09 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
index cd5141d..0867f28 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
@@ -33,6 +33,8 @@ RDEPEND="${DEPEND}
 		virtual/jre
 		dev-lang/python"
 
+MYPV="$(replace_all_version_separators '_')"
+
 src_install() {
 	# In theory it seems this binary package could be installed through ant
 	# instead of the install4j package which is not easy to be forced
@@ -56,7 +58,7 @@ src_install() {
 	# make sure we force java to point a to $HOME which is inside our sanbox
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
-	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${D}"/../temp -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_1_11_05_03.sh || die "failed to set userHome value"
-	sh "${DISTDIR}"/tablet_linux_x86_1_11_05_03.sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet || die "Failed to run the self-extracting exe file"
+	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${D}"/../temp -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_"${MYPV}".sh || die "failed to set userHome value"
+	sh "${DISTDIR}"/tablet_linux_x86_"${MYPV}".sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet || die "Failed to run the self-extracting exe file"
 	dobin "${DISTDIR}"/coveragestats.py
 }



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2011-12-12 10:59 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2011-12-12 10:59 UTC (permalink / raw
  To: gentoo-commits

commit:     a8cda363b3565c5f30a9ccdf0356c259b6ef34fe
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Dec 12 10:59:19 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Dec 12 10:59:19 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a8cda363

fix sanbox violations on some systems

(Portage version: 2.1.10.38/git/Linux i686, unsigned Manifest commit)

---
 sci-biology/tablet-bin/ChangeLog                   |    4 ++++
 .../tablet-bin/tablet-bin-1.11.11.01.ebuild        |    6 ++++++
 2 files changed, 10 insertions(+), 0 deletions(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index 7179b14..816b0bf 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -4,6 +4,10 @@
 
   12 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
   tablet-bin-1.11.11.01.ebuild:
+  fix sanbox violations on some systems tablet-bin-1.11.11.01.ebuild
+
+  12 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  tablet-bin-1.11.11.01.ebuild:
   added MYPV to the ebuild to make it more easily re-usable
   tablet-bin-1.11.11.01.ebuild
 

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
index 0867f28..422db54 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
@@ -35,6 +35,12 @@ RDEPEND="${DEPEND}
 
 MYPV="$(replace_all_version_separators '_')"
 
+pkg_setup() {
+	einfo "Fixing java access violations ..."
+	# bug 387227
+	addpredict /proc/self/coredump_filter
+}
+
 src_install() {
 	# In theory it seems this binary package could be installed through ant
 	# instead of the install4j package which is not easy to be forced



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2012-02-07 23:39 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2012-02-07 23:39 UTC (permalink / raw
  To: gentoo-commits

commit:     8e13d63d9b8b3b3d69ba4ccdd26eb766523aed2d
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Feb  7 14:02:00 2012 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Feb  7 14:02:00 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=8e13d63d

sci-biology/tablet-bin: adjust PATH to point to the installation place

(Portage version: 2.1.10.45/git/Linux x86_64, unsigned Manifest commit)

---
 sci-biology/tablet-bin/ChangeLog                   |    4 ++++
 .../tablet-bin/tablet-bin-1.11.11.01.ebuild        |    3 +++
 2 files changed, 7 insertions(+), 0 deletions(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index b4938cd..3205cfc 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -4,6 +4,10 @@
 
   07 Feb 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
   tablet-bin-1.11.11.01.ebuild:
+  adjust PATH to point to the installation place
+
+  07 Feb 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  tablet-bin-1.11.11.01.ebuild:
   make use of the TMPDIR variable
 
   12 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
index 3074c74..3e6d6e6 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
@@ -67,4 +67,7 @@ src_install() {
 	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${TMPDIR}" -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_"${MYPV}".sh || die "failed to set userHome value"
 	sh "${DISTDIR}"/tablet_linux_x86_"${MYPV}".sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet || die "Failed to run the self-extracting exe file"
 	dobin "${DISTDIR}"/coveragestats.py
+
+	echo "PATH=/opt/Tablet" > 99Tablet
+	doenvd 99Tablet || die
 }



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2012-02-07 23:39 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2012-02-07 23:39 UTC (permalink / raw
  To: gentoo-commits

commit:     169f83a8ee38cd5c42e4734fa03adf8993654744
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Feb  7 13:35:11 2012 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Feb  7 13:35:11 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=169f83a8

sci-biology/tablet-bin-1.11.11.01: make use of the TMPDIR variable

(Portage version: 2.1.10.45/git/Linux x86_64, unsigned Manifest commit)

---
 sci-biology/tablet-bin/ChangeLog                   |    6 +++++-
 .../tablet-bin/tablet-bin-1.11.11.01.ebuild        |    4 ++--
 2 files changed, 7 insertions(+), 3 deletions(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index 816b0bf..b4938cd 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -1,7 +1,11 @@
 # ChangeLog for sci-biology/tablet-bin
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  07 Feb 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  tablet-bin-1.11.11.01.ebuild:
+  make use of the TMPDIR variable
+
   12 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
   tablet-bin-1.11.11.01.ebuild:
   fix sanbox violations on some systems tablet-bin-1.11.11.01.ebuild

diff --git a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
index 422db54..3074c74 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.11.11.01.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
@@ -64,7 +64,7 @@ src_install() {
 	# make sure we force java to point a to $HOME which is inside our sanbox
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
-	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${D}"/../temp -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_"${MYPV}".sh || die "failed to set userHome value"
+	sed "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${TMPDIR}" -Dinstall4j.jvmDir#" -i "${DISTDIR}"/tablet_linux_x86_"${MYPV}".sh || die "failed to set userHome value"
 	sh "${DISTDIR}"/tablet_linux_x86_"${MYPV}".sh -q -overwrite -varfile="${DISTDIR}"/response.varfile --destination="${D}"/opt/Tablet -dir "${D}"/opt/Tablet || die "Failed to run the self-extracting exe file"
 	dobin "${DISTDIR}"/coveragestats.py
 }



^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2014-01-20 21:19 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2014-01-20 21:19 UTC (permalink / raw
  To: gentoo-commits

commit:     f50f465dae726ce192266930b570a8a6ab296a89
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Jan 20 21:19:29 2014 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Jan 20 21:19:29 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f50f465d

Version bump

Package-Manager: portage-2.2.7

---
 sci-biology/tablet-bin/ChangeLog                                 | 9 +++++++--
 ...tablet-bin-1.13.05.17.ebuild => tablet-bin-1.13.12.17.ebuild} | 5 +++--
 2 files changed, 10 insertions(+), 4 deletions(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index b411978..d48473a 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -1,7 +1,13 @@
 # ChangeLog for sci-biology/tablet-bin
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*tablet-bin-1.13.12.17 (20 Jan 2014)
+
+  20 Jan 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  +tablet-bin-1.13.12.17.ebuild, -tablet-bin-1.13.05.17.ebuild:
+  Version bump
+
   16 Jun 2013; Justin Lecher <jlec@gentoo.org> tablet-bin-1.13.05.17.ebuild:
   Version Bump; Bump to EAPI5 and python-r1.eclass; drop addpredict
 
@@ -31,4 +37,3 @@
   09 Dec 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
   tablet-bin-1.11.05.03.ebuild, +tablet-bin-1.11.11.01.ebuild:
   ebuild cleanup, version bump
-

diff --git a/sci-biology/tablet-bin/tablet-bin-1.13.05.17.ebuild b/sci-biology/tablet-bin/tablet-bin-1.13.12.17.ebuild
similarity index 92%
rename from sci-biology/tablet-bin/tablet-bin-1.13.05.17.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.13.12.17.ebuild
index 762e888..7b7d001 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.13.05.17.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.13.12.17.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
@@ -11,7 +11,8 @@ inherit java-pkg-2 python-r1
 DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
 SRC_URI="
-	http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh
+	x86? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
+	amd64? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
 	http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
 
 # Upstream says regarding source code unavailability:


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2014-07-02 22:42 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2014-07-02 22:42 UTC (permalink / raw
  To: gentoo-commits

commit:     01ff3a2d6b36716aa83e749acfeb4cc09e076ba8
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Jul  2 22:40:49 2014 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed Jul  2 22:40:49 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=01ff3a2d

sci-biology/tablet-bin: version bump; updated the license

Package-Manager: portage-2.2.7

---
 sci-biology/tablet-bin/ChangeLog                   |  6 ++
 .../tablet-bin/tablet-bin-1.14.04.10.ebuild        | 97 ++++++++++++++++++++++
 2 files changed, 103 insertions(+)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index d48473a..8b38781 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -2,6 +2,12 @@
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*tablet-bin-1.14.04.10 (02 Jul 2014)
+
+  02 Jul 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  +tablet-bin-1.14.04.10.ebuild:
+  sci-biology/tablet-bin: version bump; updated the license
+
 *tablet-bin-1.13.12.17 (20 Jan 2014)
 
   20 Jan 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>

diff --git a/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild b/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild
new file mode 100644
index 0000000..1a0fdf1
--- /dev/null
+++ b/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild
@@ -0,0 +1,97 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+PYTHON_COMPAT=( python{2_6,2_7} )
+
+inherit java-pkg-2 python-r1
+
+DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
+HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
+SRC_URI="
+	x86? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
+	amd64? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
+	http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
+
+# Upstream says regarding source code unavailability:
+# Tablet uses a modified version of the BSD License which has been edited to
+# remove references to distribution and use in source forms. This means that
+# we are happy for you to distribute and use Tablet however you please, but we
+# do not (yet) want to make the source code publicly available.
+
+# The licence file itself is in the installer, and ends up on disk after
+# installation at /opt/Tablet/docs/tablet.html
+# The original BSD licence was modified to remove references to distribution
+# and use in source forms, because we cannot make the source code available
+# for Tablet.
+
+LICENSE="Tablet"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+DEPEND="${PYTHON_DEPS}"
+RDEPEND="${DEPEND}
+		virtual/jre"
+
+S="${WORKDIR}"
+
+src_unpack() {
+	local file
+	for file in ${A}; do
+		cp "${DISTDIR}"/${file} "${WORKDIR}" || die
+	done
+}
+
+src_install() {
+	# In theory it seems this binary package could be installed through ant
+	# instead of the install4j package which is not easy to be forced
+	# non-interactive. The below approach via install4j is not ideal but works.
+	sed "s#\"\${D}\"#\"${D}\"#g" "${FILESDIR}"/response.varfile > "${WORKDIR}"/response.varfile || die "sed failed"
+
+	# the intallation script somehow does not pickup
+	# -varfile="${DISTDIR}"/response.varfile from the commandline and therefore
+	# we place the file rather directly into the place where it should reside.
+	# In the file you can read details how the variables were mangled. For
+	# example, the trick with sys.symlinkDir in the response.varfile is to
+	# disable the installation process to symlink from /usr/local/bin/table to
+	# /opt/Tablet/tablet. That was logged in that file with the following line:
+	#
+	# /var/tmp/portage/sci-biology/tablet-bin-1.11.02.18/image/opt/Tablet/.install4j/installation.log:
+	#	Variable changed: sys.symlinkDir=/usr/local/bin[class java.lang.String]
+	#
+	# The file is then left on the installed system in "${D}"/opt/Tablet/.install4j/response.varfile
+	dodir /opt/Tablet/.install4j
+	cat "${WORKDIR}"/response.varfile > "${ED}"/opt/Tablet/.install4j/response.varfile || die
+
+	# make sure we force java to point a to $HOME which is inside our sanbox
+	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
+	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
+	sed \
+		-e "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${TMPDIR}" -Dinstall4j.jvmDir#" \
+		-i "${WORKDIR}"/${P}.sh || die
+	sh \
+		"${WORKDIR}"/${P}.sh \
+		-q -overwrite \
+		-varfile="${DISTDIR}"/response.varfile \
+		--destination="${ED}"/opt/Tablet \
+		-dir "${ED}"/opt/Tablet || die
+
+	rm -rf "${ED}"/opt/Tablet/jre || die
+
+    # this dies with tablet-bin-1.14.04.10 with
+	#  * python2_7: running python_doscript /mnt/1TB/var/tmp/portage/sci-biology/tablet-bin-1.14.04.10/work/coveragestats.py
+	#  * The file has incompatible shebang:
+	#  *   file: /usr/lib/python-exec/python2.7/coveragestats.py
+	#  *   current shebang: #!/usr/bin/env python
+	#  *   requested impl: python2.7
+	#
+	# python_foreach_impl python_doscript "${WORKDIR}"/coveragestats.py
+
+	echo "PATH=${EPREFIX}/opt/Tablet" > 99Tablet
+	doenvd 99Tablet || die
+}


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2014-09-16 17:01 Christoph Junghans
  0 siblings, 0 replies; 26+ messages in thread
From: Christoph Junghans @ 2014-09-16 17:01 UTC (permalink / raw
  To: gentoo-commits

commit:     a9ed26d1da41bed56c21a42495c7be6f80da93d7
Author:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Tue Sep 16 16:27:16 2014 +0000
Commit:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
CommitDate: Tue Sep 16 16:27:16 2014 +0000
URL:        http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a9ed26d1

clean up

Package-Manager: portage-2.2.8-r1

---
 sci-biology/tablet-bin/ChangeLog                    | 4 ++++
 sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild | 2 +-
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index 8b38781..7128ae0 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  16 Sep 2014; Christoph Junghans <ottxor@gentoo.org>
+  tablet-bin-1.14.04.10.ebuild:
+  clean up
+
 *tablet-bin-1.14.04.10 (02 Jul 2014)
 
   02 Jul 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>

diff --git a/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild b/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild
index 1a0fdf1..d13ad0c 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild
@@ -83,7 +83,7 @@ src_install() {
 
 	rm -rf "${ED}"/opt/Tablet/jre || die
 
-    # this dies with tablet-bin-1.14.04.10 with
+	# this dies with tablet-bin-1.14.04.10 with
 	#  * python2_7: running python_doscript /mnt/1TB/var/tmp/portage/sci-biology/tablet-bin-1.14.04.10/work/coveragestats.py
 	#  * The file has incompatible shebang:
 	#  *   file: /usr/lib/python-exec/python2.7/coveragestats.py


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2015-03-16  7:03 Justin Lecher
  0 siblings, 0 replies; 26+ messages in thread
From: Justin Lecher @ 2015-03-16  7:03 UTC (permalink / raw
  To: gentoo-commits

commit:     0a5a7511e618764600d35bd6d03c08b1ecf7f0f9
Author:     Ted Tanberry <ted.tanberry <AT> gmail <DOT> com>
AuthorDate: Sun Mar 15 18:17:50 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Mar 15 18:17:50 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=0a5a7511

Updated sci-biology/tablet-bin to latest version, removed stale ebuilds.

 sci-biology/tablet-bin/ChangeLog                   |  9 ++-
 .../tablet-bin/tablet-bin-1.13.12.17.ebuild        | 90 ----------------------
 ...4.04.10.ebuild => tablet-bin-1.14.10.21.ebuild} |  8 +-
 3 files changed, 12 insertions(+), 95 deletions(-)

diff --git a/sci-biology/tablet-bin/ChangeLog b/sci-biology/tablet-bin/ChangeLog
index 7128ae0..6864475 100644
--- a/sci-biology/tablet-bin/ChangeLog
+++ b/sci-biology/tablet-bin/ChangeLog
@@ -1,7 +1,14 @@
 # ChangeLog for sci-biology/tablet-bin
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*tablet-bin-1.14.10.21 (15 Mar 2015)
+
+  15 Mar 2015; Ted Tanberry <ted.tanberry@gmail.com>
+  +tablet-bin-1.14.10.21.ebuild,
+  -tablet-bin-1.13.12.17.ebuild, -tablet-bin-1.14.04.10.ebuild:
+  Version bump, update SRC_URI, remove dead ebuilds
+
   16 Sep 2014; Christoph Junghans <ottxor@gentoo.org>
   tablet-bin-1.14.04.10.ebuild:
   clean up

diff --git a/sci-biology/tablet-bin/tablet-bin-1.13.12.17.ebuild b/sci-biology/tablet-bin/tablet-bin-1.13.12.17.ebuild
deleted file mode 100644
index 7b7d001..0000000
--- a/sci-biology/tablet-bin/tablet-bin-1.13.12.17.ebuild
+++ /dev/null
@@ -1,90 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-PYTHON_COMPAT=( python{2_6,2_7} )
-
-inherit java-pkg-2 python-r1
-
-DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
-HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
-SRC_URI="
-	x86? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
-	amd64? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
-	http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
-
-# Upstream says regarding source code unavailability:
-# Tablet uses a modified version of the BSD License which has been edited to
-# remove references to distribution and use in source forms. This means that
-# we are happy for you to distribute and use Tablet however you please, but we
-# do not (yet) want to make the source code publicly available.
-
-# The licence file itself is in the installer, and ends up on disk after
-# installation at /opt/Tablet/docs/tablet.html
-# The original BSD licence was modified to remove references to distribution
-# and use in source forms, because we cannot make the source code available
-# for Tablet.
-
-LICENSE="Tablet"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="${PYTHON_DEPS}"
-RDEPEND="${DEPEND}
-		virtual/jre"
-
-S="${WORKDIR}"
-
-src_unpack() {
-	local file
-	for file in ${A}; do
-		cp "${DISTDIR}"/${file} "${WORKDIR}" || die
-	done
-}
-
-src_install() {
-	# In theory it seems this binary package could be installed through ant
-	# instead of the install4j package which is not easy to be forced
-	# non-interactive. The below approach via install4j is not ideal but works.
-	sed "s#\"\${D}\"#\"${D}\"#g" "${FILESDIR}"/response.varfile > "${WORKDIR}"/response.varfile || die "sed failed"
-
-	# the intallation script somehow does not pickup
-	# -varfile="${DISTDIR}"/response.varfile from the commandline and therefore
-	# we place the file rather directly into the place where it should reside.
-	# In the file you can read details how the variables were mangled. For
-	# example, the trick with sys.symlinkDir in the response.varfile is to
-	# disable the installation process to symlink from /usr/local/bin/table to
-	# /opt/Tablet/tablet. That was logged in that file with the following line:
-	#
-	# /var/tmp/portage/sci-biology/tablet-bin-1.11.02.18/image/opt/Tablet/.install4j/installation.log:
-	#	Variable changed: sys.symlinkDir=/usr/local/bin[class java.lang.String]
-	#
-	# The file is then left on the installed system in "${D}"/opt/Tablet/.install4j/response.varfile
-	dodir /opt/Tablet/.install4j
-	cat "${WORKDIR}"/response.varfile > "${ED}"/opt/Tablet/.install4j/response.varfile || die
-
-	# make sure we force java to point a to $HOME which is inside our sanbox
-	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
-	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
-	sed \
-		-e "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${TMPDIR}" -Dinstall4j.jvmDir#" \
-		-i "${WORKDIR}"/${P}.sh || die
-	sh \
-		"${WORKDIR}"/${P}.sh \
-		-q -overwrite \
-		-varfile="${DISTDIR}"/response.varfile \
-		--destination="${ED}"/opt/Tablet \
-		-dir "${ED}"/opt/Tablet || die
-
-	rm -rf "${ED}"/opt/Tablet/jre || die
-
-	python_foreach_impl python_doscript "${WORKDIR}"/coveragestats.py
-
-	echo "PATH=${EPREFIX}/opt/Tablet" > 99Tablet
-	doenvd 99Tablet || die
-}

diff --git a/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild b/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
similarity index 91%
rename from sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
index d13ad0c..4f36d7e 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.14.04.10.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
@@ -11,9 +11,9 @@ inherit java-pkg-2 python-r1
 DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
 HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
 SRC_URI="
-	x86? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
-	amd64? ( http://bioinf.scri.ac.uk/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
-	http://bioinf.scri.ac.uk/tablet/additional/coveragestats.py"
+	x86? ( http://bioinf.hutton.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
+	amd64? ( http://bioinf.hutton.ac.uk/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
+	http://bioinf.hutton.ac.uk/tablet/additional/coveragestats.py"
 
 # Upstream says regarding source code unavailability:
 # Tablet uses a modified version of the BSD License which has been edited to


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2015-03-28 16:41 Justin Lecher
  0 siblings, 0 replies; 26+ messages in thread
From: Justin Lecher @ 2015-03-28 16:41 UTC (permalink / raw
  To: gentoo-commits

commit:     2e448f8cd4ae8fca64381058d48ea8e683234c0d
Author:     Ted Tanberry <ted.tanberry <AT> gmail <DOT> com>
AuthorDate: Sat Mar 28 12:08:22 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Mar 28 12:08:22 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=2e448f8c

sci-biology/tablet-bin: Update HOMEPAGE

 sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild b/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
index 4f36d7e..4026035 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
@@ -9,7 +9,7 @@ PYTHON_COMPAT=( python{2_6,2_7} )
 inherit java-pkg-2 python-r1
 
 DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
-HOMEPAGE="http://bioinf.scri.ac.uk/tablet/"
+HOMEPAGE="http://ics.hutton.ac.uk/tablet/"
 SRC_URI="
 	x86? ( http://bioinf.hutton.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
 	amd64? ( http://bioinf.hutton.ac.uk/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2016-04-20 19:05 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2016-04-20 19:05 UTC (permalink / raw
  To: gentoo-commits

commit:     03e6391c2d30887d78676f50bf050a121a5b6da4
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Apr 20 19:05:03 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed Apr 20 19:05:03 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=03e6391c

sci-biology/tablet-bin: version bump; added coveragestats.py (requires dos2unix)

Package-Manager: portage-2.2.28

 .../{tablet-bin-1.14.10.21.ebuild => tablet-bin-1.15.09.01.ebuild}  | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild b/sci-biology/tablet-bin/tablet-bin-1.15.09.01.ebuild
similarity index 96%
rename from sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.15.09.01.ebuild
index 6c0e63a..d894aa1 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.14.10.21.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.15.09.01.ebuild
@@ -34,7 +34,8 @@ IUSE=""
 
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
-DEPEND="${PYTHON_DEPS}"
+DEPEND="${PYTHON_DEPS}
+	app-text/dos2unix"
 RDEPEND="${DEPEND}
 		virtual/jre"
 
@@ -91,6 +92,9 @@ src_install() {
 	#  *   requested impl: python2.7
 	#
 	# python_foreach_impl python_doscript "${WORKDIR}"/coveragestats.py
+	dos2unix "${WORKDIR}"/coveragestats.py coveragestats.py || die
+	insinto /opt/Tablet/utils
+	doins coveragestats.py
 
 	echo "PATH=${EPREFIX}/opt/Tablet" > 99Tablet
 	doenvd 99Tablet


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2017-02-19  0:51 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2017-02-19  0:51 UTC (permalink / raw
  To: gentoo-commits

commit:     2547daf2073118349d378e765f96d227104a7aa1
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Feb 19 00:51:34 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Feb 19 00:51:34 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=2547daf2

sci-biology/tablet-bin: version bump

Pass '-Djava.util.prefs.systemRoot=${TMPDIR}' to java to avoid permission denied
when writing to /etc/.java/.systemPrefs (outside our sandbox)

The /opt/Tablet/tablet wrapper falsely issues error although am on Oracle JDK 1.8.0.121 [oracle-jdk-bin-1.8]:

  java.lang.UnsupportedClassVersionError: tablet/gui/Tablet : Unsupported major.minor version 52.0

However, 'java -jar /opt/Tablet/lib/tablet.jar' runs fine.

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 ...blet-bin-1.15.09.01.ebuild => tablet-bin-1.16.09.06.ebuild} | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.15.09.01.ebuild b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
similarity index 93%
rename from sci-biology/tablet-bin/tablet-bin-1.15.09.01.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
index d894aa183..78b7b5386 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.15.09.01.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
@@ -35,9 +35,10 @@ IUSE=""
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 DEPEND="${PYTHON_DEPS}
-	app-text/dos2unix"
+	app-text/dos2unix
+	>=virtual/jdk-1.8"
 RDEPEND="${DEPEND}
-		virtual/jre"
+		>=virtual/jre-1.8"
 
 S="${WORKDIR}"
 
@@ -73,8 +74,7 @@ src_install() {
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
 	sed \
-		-e "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home="${TMPDIR}" -Dinstall4j.jvmDir#" \
-		-i "${WORKDIR}"/${P}.sh || die
+		-e "s#/bin/java\" -Dinstall4j.jvmDir#"${EPREFIX}"/bin/java\" -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
 	sh \
 		"${WORKDIR}"/${P}.sh \
 		-q -overwrite \


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2017-02-19 10:09 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2017-02-19 10:09 UTC (permalink / raw
  To: gentoo-commits

commit:     0d0b63f4cc9c906555373259334a830126d98e45
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Feb 19 10:09:07 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Feb 19 10:09:07 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=0d0b63f4

sci-biology/tablet-bin: fix sed hackery for EPREFIX installations

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
index 78b7b5386..5819aeed8 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
@@ -74,7 +74,7 @@ src_install() {
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
 	sed \
-		-e "s#/bin/java\" -Dinstall4j.jvmDir#"${EPREFIX}"/bin/java\" -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
+		-e 's#"$app_java_home/bin/java" -Dinstall4j.jvmDir# '"${EPREFIX}""/usr/bin/java -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
 	sh \
 		"${WORKDIR}"/${P}.sh \
 		-q -overwrite \


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2017-02-20 10:32 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2017-02-20 10:32 UTC (permalink / raw
  To: gentoo-commits

commit:     2757bce9c317df0e626a3487e41be845ea4c37d6
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Feb 20 10:32:07 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Feb 20 10:32:07 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=2757bce9

sci-biology/tablet-bin: use two alternative sed calls to distinguish normal and EPREFIX installations

Somehow the EPREFIX-enabled sed call breaks normal non-EPREFIX host installations.
Document bundled jar files.

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild | 17 ++++++++++++-----
 1 file changed, 12 insertions(+), 5 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
index 5819aeed8..4231c9411 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
@@ -39,6 +39,7 @@ DEPEND="${PYTHON_DEPS}
 	>=virtual/jdk-1.8"
 RDEPEND="${DEPEND}
 		>=virtual/jre-1.8"
+# contains bundled sqlite-jdbc-3.8.6.jar, samtools-linux64.jar, picard.jar
 
 S="${WORKDIR}"
 
@@ -73,8 +74,13 @@ src_install() {
 	# make sure we force java to point a to $HOME which is inside our sanbox
 	# directory area. We force -Duser.home . It seems also -Dinstall4j.userHome
 	# could be done based on the figure shown at http://resources.ej-technologies.com/install4j/help/doc/
-	sed \
-		-e 's#"$app_java_home/bin/java" -Dinstall4j.jvmDir# '"${EPREFIX}""/usr/bin/java -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
+	if [ -z "${EPREFIX}" ]; then
+		sed \
+		-e "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
+	else
+		sed \
+			-e 's#"$app_java_home/bin/java" -Dinstall4j.jvmDir# '"${EPREFIX}""/usr/bin/java -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
+	fi
 	sh \
 		"${WORKDIR}"/${P}.sh \
 		-q -overwrite \
@@ -82,7 +88,7 @@ src_install() {
 		--destination="${ED}"/opt/Tablet \
 		-dir "${ED}"/opt/Tablet || die
 
-	rm -rf "${ED}"/opt/Tablet/jre || die
+	rm -rf "${ED}"/opt/Tablet/jre "${ED}"/opt/Tablet/.install4j || die
 
 	# this dies with tablet-bin-1.14.04.10 with
 	#  * python2_7: running python_doscript /mnt/1TB/var/tmp/portage/sci-biology/tablet-bin-1.14.04.10/work/coveragestats.py
@@ -96,6 +102,7 @@ src_install() {
 	insinto /opt/Tablet/utils
 	doins coveragestats.py
 
-	echo "PATH=${EPREFIX}/opt/Tablet" > 99Tablet
-	doenvd 99Tablet
+	# do not use 99Tablet to avoid file collision with sci-biology/tablet
+	echo "PATH=${EPREFIX}/opt/Tablet" > 99Tablet-bin
+	doenvd 99Tablet-bin
 }


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2017-02-20 11:59 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2017-02-20 11:59 UTC (permalink / raw
  To: gentoo-commits

commit:     8be5fc83dfffd37f2b607cfcbe6b17be01745594
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Feb 20 11:59:55 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Feb 20 11:59:55 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8be5fc83

sci-biology/tablet-bin: do not zap bundled jar files as we do not have a package for them in Gentoo

Maybe except picard.jar while upstream uses picard-1.113 in tablet-1.16.09.06.
We should be around 2.0.3 with sci-biology/picard-9999 as of now.

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild | 11 +++++++++++
 1 file changed, 11 insertions(+)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
index 4231c9411..6fc765e54 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
@@ -40,6 +40,8 @@ DEPEND="${PYTHON_DEPS}
 RDEPEND="${DEPEND}
 		>=virtual/jre-1.8"
 # contains bundled sqlite-jdbc-3.8.6.jar, samtools-linux64.jar, picard.jar
+# sqlite-jdbc-3.8.6.jar is not dev-db/sqlite:3 and samtools-linux64.jar is not sci-biology/samtools either
+# replacing picard.jar with a symlink to picard.jar from sci-biology.picard does not help either
 
 S="${WORKDIR}"
 
@@ -90,6 +92,15 @@ src_install() {
 
 	rm -rf "${ED}"/opt/Tablet/jre "${ED}"/opt/Tablet/.install4j || die
 
+	# zap bundled jars
+	# do not zap even picard.jar because tablet does not start then with an error:
+	#   java.lang.NoClassDefFoundError: net/sf/samtools/SAMReadGroupRecord
+	# not even a symlink to "${EPREFIX}"/usr/share/picard/lib/picard.jar helps
+	#
+	# for f in picard.jar; do
+	# 	rm -f "${ED}"/opt/Tablet/lib/"$f" || die
+	# done
+
 	# this dies with tablet-bin-1.14.04.10 with
 	#  * python2_7: running python_doscript /mnt/1TB/var/tmp/portage/sci-biology/tablet-bin-1.14.04.10/work/coveragestats.py
 	#  * The file has incompatible shebang:


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2018-04-02 12:45 Justin Lecher
  0 siblings, 0 replies; 26+ messages in thread
From: Justin Lecher @ 2018-04-02 12:45 UTC (permalink / raw
  To: gentoo-commits

commit:     943bda111f0078c3aff0f3b6419fcd4c6a8a7fa9
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Apr  2 12:40:39 2018 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Apr  2 12:40:39 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=943bda11

sci-biology/tablet-bin: FIX specify an explicit slot

Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
Package-Manager: Portage-2.3.27, Repoman-2.3.9

 sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild | 9 ++++-----
 1 file changed, 4 insertions(+), 5 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
index c81c64e9b..401515e00 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
+EAPI=6
 
 PYTHON_COMPAT=( python2_7 )
 
@@ -35,9 +35,8 @@ REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 DEPEND="${PYTHON_DEPS}
 	app-text/dos2unix
-	>=virtual/jdk-1.8"
-RDEPEND="${DEPEND}
-		>=virtual/jre-1.8"
+	>=virtual/jdk-1.8:*"
+RDEPEND="${DEPEND}"
 # contains bundled sqlite-jdbc-3.8.6.jar, samtools-linux64.jar, picard.jar
 # sqlite-jdbc-3.8.6.jar is not dev-db/sqlite:3 and samtools-linux64.jar is not sci-biology/samtools either
 # replacing picard.jar with a symlink to picard.jar from sci-biology.picard does not help either


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2019-03-25  9:30 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2019-03-25  9:30 UTC (permalink / raw
  To: gentoo-commits

commit:     9f62533afcb9014961a43534237d3a31a7aa4d00
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Mar 25 09:03:15 2019 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Mar 25 09:03:15 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=9f62533a

sci-biology/tablet-bin: version bump, ebuild cleanup

Package-Manager: Portage-2.3.62, Repoman-2.3.12
Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz>

 ...tablet-bin-1.16.09.06.ebuild => tablet-bin-1.17.08.17.ebuild} | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild b/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
similarity index 93%
rename from sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
index 401515e00..6934743b1 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.16.09.06.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2018 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
@@ -10,8 +10,8 @@ inherit java-pkg-2 python-r1
 DESCRIPTION="Viewer of next generation sequence assemblies and alignments"
 HOMEPAGE="http://ics.hutton.ac.uk/tablet/"
 SRC_URI="
-	x86? ( http://bioinf.hutton.ac.uk/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
-	amd64? ( http://bioinf.hutton.ac.uk/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
+	x86? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
+	amd64? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
 	http://bioinf.hutton.ac.uk/tablet/additional/coveragestats.py"
 
 # Upstream says regarding source code unavailability:
@@ -36,7 +36,8 @@ REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 DEPEND="${PYTHON_DEPS}
 	app-text/dos2unix
 	>=virtual/jdk-1.8:*"
-RDEPEND="${DEPEND}"
+RDEPEND="${DEPEND}
+	>=virtual/jre-1.8:*"
 # contains bundled sqlite-jdbc-3.8.6.jar, samtools-linux64.jar, picard.jar
 # sqlite-jdbc-3.8.6.jar is not dev-db/sqlite:3 and samtools-linux64.jar is not sci-biology/samtools either
 # replacing picard.jar with a symlink to picard.jar from sci-biology.picard does not help either


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2019-03-25  9:31 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2019-03-25  9:31 UTC (permalink / raw
  To: gentoo-commits

commit:     ad4cf1cc47d4dadaec146d2515ae9645c062adcd
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Mar 25 09:30:59 2019 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Mar 25 09:30:59 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ad4cf1cc

sci-biology/tablet-bin: use https for the new homepage

Package-Manager: Portage-2.3.62, Repoman-2.3.12
Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz>

 sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild b/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
index 6934743b1..51f2d7921 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
@@ -8,7 +8,7 @@ PYTHON_COMPAT=( python2_7 )
 inherit java-pkg-2 python-r1
 
 DESCRIPTION="Viewer of next generation sequence assemblies and alignments"
-HOMEPAGE="http://ics.hutton.ac.uk/tablet/"
+HOMEPAGE="https://ics.hutton.ac.uk/tablet"
 SRC_URI="
 	x86? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
 	amd64? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2019-03-25  9:40 Martin Mokrejs
  0 siblings, 0 replies; 26+ messages in thread
From: Martin Mokrejs @ 2019-03-25  9:40 UTC (permalink / raw
  To: gentoo-commits

commit:     6520aa795d79c63f0566d8b1059acb95899f8f81
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Mar 25 09:40:18 2019 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Mar 25 09:40:18 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=6520aa79

sci-biology/tablet-bin: update license

Package-Manager: Portage-2.3.62, Repoman-2.3.12
Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz>

 sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild | 14 +-------------
 1 file changed, 1 insertion(+), 13 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild b/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
index 51f2d7921..fb89b4208 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
@@ -14,19 +14,7 @@ SRC_URI="
 	amd64? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
 	http://bioinf.hutton.ac.uk/tablet/additional/coveragestats.py"
 
-# Upstream says regarding source code unavailability:
-# Tablet uses a modified version of the BSD License which has been edited to
-# remove references to distribution and use in source forms. This means that
-# we are happy for you to distribute and use Tablet however you please, but we
-# do not (yet) want to make the source code publicly available.
-
-# The licence file itself is in the installer, and ends up on disk after
-# installation at /opt/Tablet/docs/tablet.html
-# The original BSD licence was modified to remove references to distribution
-# and use in source forms, because we cannot make the source code available
-# for Tablet.
-
-LICENSE="Tablet"
+LICENSE="BSD-2"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE=""


^ permalink raw reply related	[flat|nested] 26+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/tablet-bin/
@ 2021-01-18 13:48 Andrew Ammerlaan
  0 siblings, 0 replies; 26+ messages in thread
From: Andrew Ammerlaan @ 2021-01-18 13:48 UTC (permalink / raw
  To: gentoo-commits

commit:     6ff0fe6421ccb04c1746e46ea2b61fc02d4c0f98
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Mon Jan 18 13:48:11 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Mon Jan 18 13:48:11 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=6ff0fe64

sci-biology/tablet-bin: fix fetching

Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 ...bin-1.17.08.17.ebuild => tablet-bin-1.20.12.24.ebuild} | 15 +++++++--------
 1 file changed, 7 insertions(+), 8 deletions(-)

diff --git a/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild b/sci-biology/tablet-bin/tablet-bin-1.20.12.24.ebuild
similarity index 89%
rename from sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
rename to sci-biology/tablet-bin/tablet-bin-1.20.12.24.ebuild
index fb89b4208..697ae0d36 100644
--- a/sci-biology/tablet-bin/tablet-bin-1.17.08.17.ebuild
+++ b/sci-biology/tablet-bin/tablet-bin-1.20.12.24.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2019 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
 PYTHON_COMPAT=( python2_7 )
 
@@ -10,14 +10,13 @@ inherit java-pkg-2 python-r1
 DESCRIPTION="Viewer of next generation sequence assemblies and alignments"
 HOMEPAGE="https://ics.hutton.ac.uk/tablet"
 SRC_URI="
-	x86? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x86_$(replace_all_version_separators _).sh -> ${P}.sh )
-	amd64? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x64_$(replace_all_version_separators _).sh -> ${P}.sh )
-	http://bioinf.hutton.ac.uk/tablet/additional/coveragestats.py"
+	x86? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x86_$(ver_rs 0-3 _).sh -> ${P}.sh )
+	amd64? ( https://ics.hutton.ac.uk/resources/tablet/installers/tablet_linux_x64_$(ver_rs 0-3 _).sh -> ${P}.sh )
+	https://bioinf.hutton.ac.uk/tablet/additional/coveragestats.py"
 
 LICENSE="BSD-2"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
+KEYWORDS=""
 
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
@@ -68,7 +67,7 @@ src_install() {
 		-e "s#/bin/java\" -Dinstall4j.jvmDir#/bin/java\" -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
 	else
 		sed \
-			-e 's#"$app_java_home/bin/java" -Dinstall4j.jvmDir# '"${EPREFIX}""/usr/bin/java -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
+		-e 's#"$app_java_home/bin/java" -Dinstall4j.jvmDir# '"${EPREFIX}""/usr/bin/java -Duser.home=${TMPDIR} -Dinstall4j.jvmDir -Djava.util.prefs.systemRoot=${TMPDIR}#" -i "${WORKDIR}"/${P}.sh || die
 	fi
 	sh \
 		"${WORKDIR}"/${P}.sh \


^ permalink raw reply related	[flat|nested] 26+ messages in thread

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2018-04-02 12:45 Justin Lecher
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2017-02-19  0:51 Martin Mokrejs
2016-04-20 19:05 Martin Mokrejs
2015-03-28 16:41 Justin Lecher
2015-03-16  7:03 Justin Lecher
2014-09-16 17:01 Christoph Junghans
2014-07-02 22:42 Martin Mokrejs
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2012-02-07 23:39 Martin Mokrejs
2012-02-07 23:39 Martin Mokrejs
2011-12-12 10:59 Martin Mokrejs
2011-12-12 10:49 Martin Mokrejs
2011-12-09 16:53 Martin Mokrejs
2011-12-09 16:41 Martin Mokrejs
2011-06-24 17:09 Justin Lecher
2011-05-04  0:28 Martin Mokrejs
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2011-05-04  0:13 Martin Mokrejs
2011-02-14 18:48 Martin Mokrejs

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