public inbox for gentoo-commits@lists.gentoo.org
 help / color / mirror / Atom feed
From: "Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/maker/
Date: Sat,  3 Dec 2016 18:47:53 +0000 (UTC)	[thread overview]
Message-ID: <1480790856.00c696ea8f4123f5992f4e674db071c4cde8a136.mmokrejs@gentoo> (raw)

commit:     00c696ea8f4123f5992f4e674db071c4cde8a136
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sat Dec  3 18:47:36 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sat Dec  3 18:47:36 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=00c696ea

sci-biology/maker: record required augustus version actually

Package-Manager: portage-2.3.2

 sci-biology/maker/maker-2.31.8.ebuild | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/sci-biology/maker/maker-2.31.8.ebuild b/sci-biology/maker/maker-2.31.8.ebuild
index 17661aa..58b30cf 100644
--- a/sci-biology/maker/maker-2.31.8.ebuild
+++ b/sci-biology/maker/maker-2.31.8.ebuild
@@ -42,8 +42,11 @@ DEPEND="
 	sci-biology/ncbi-tools || ( sci-biology/ncbi-tools++ )
 	sci-biology/snap
 	sci-biology/exonerate
-	sci-biology/augustus
+	>=sci-biology/augustus-2.0
 	sci-biology/repeatmasker"
+	#sci-biology/GeneMark_ES-bin
+	#sci-biology/GeneMark_S-bin
+	#>=sci-biology/FGENESH-bin-2.4 (not in gentoo yet)
 RDEPEND="${DEPEND}"
 # dev-perl/forks-shared ?
 


             reply	other threads:[~2016-12-03 18:48 UTC|newest]

Thread overview: 25+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2016-12-03 18:47 Martin Mokrejs [this message]
  -- strict thread matches above, loose matches on Subject: below --
2021-08-31  9:24 [gentoo-commits] proj/sci:master commit in: sci-biology/maker/ Andrew Ammerlaan
2021-03-19 11:08 Andrew Ammerlaan
2021-03-18 18:54 Andrew Ammerlaan
2021-03-06 12:17 Andrew Ammerlaan
2021-01-19 16:26 Andrew Ammerlaan
2019-07-01  8:15 Martin Mokrejs
2019-03-28 21:46 Martin Mokrejs
2016-08-02 15:21 Martin Mokrejs
2016-08-02 14:50 Martin Mokrejs
2015-12-31 21:26 Martin Mokrejs
2015-12-30 19:16 Martin Mokrejs
2015-12-30 18:17 Martin Mokrejs
2015-12-30 17:43 Martin Mokrejs
2015-12-18 14:16 Martin Mokrejs
2015-12-18 13:51 Martin Mokrejs
2015-12-01 12:01 Martin Mokrejs
2015-11-24 17:06 Martin Mokrejs
2015-11-20 21:38 Martin Mokrejs
2015-11-20 21:28 Martin Mokrejs
2015-11-20 21:09 Martin Mokrejs
2015-03-30 19:50 [gentoo-commits] proj/sci:master commit in: sci-biology/MAKER/ Martin Mokrejs
2015-03-30 18:25 [gentoo-commits] proj/sci:master commit in: sci-biology/maker/ Martin Mokrejs
2014-09-16  4:07 [gentoo-commits] proj/sci:master commit in: sci-biology/MAKER/ Christoph Junghans
2014-03-23 21:06 Martin Mokrejs

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=1480790856.00c696ea8f4123f5992f4e674db071c4cde8a136.mmokrejs@gentoo \
    --to=mmokrejs@fold.natur.cuni.cz \
    --cc=gentoo-commits@lists.gentoo.org \
    --cc=gentoo-dev@lists.gentoo.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox