From: "Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/Jannovar-bin/
Date: Tue, 15 Nov 2016 20:20:10 +0000 (UTC) [thread overview]
Message-ID: <1479241203.b2815a91492bff320b83e10cd510b04b2186de27.mmokrejs@gentoo> (raw)
commit: b2815a91492bff320b83e10cd510b04b2186de27
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Nov 15 20:20:03 2016 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Nov 15 20:20:03 2016 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=b2815a91
sci-biology/Jannovar-bin: replaced by sci-biology/jannovar, deleting
.../Jannovar-bin/Jannovar-bin-20150503.ebuild | 30 ----------------------
sci-biology/Jannovar-bin/metadata.xml | 12 ---------
2 files changed, 42 deletions(-)
diff --git a/sci-biology/Jannovar-bin/Jannovar-bin-20150503.ebuild b/sci-biology/Jannovar-bin/Jannovar-bin-20150503.ebuild
deleted file mode 100644
index 09efa5d..0000000
--- a/sci-biology/Jannovar-bin/Jannovar-bin-20150503.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-inherit java-pkg-2
-
-DESCRIPTION="Exome annotation tool"
-HOMEPAGE="http://compbio.charite.de/contao/index.php/jannovar.html"
-SRC_URI="http://compbio.charite.de/contao/index.php/jannovar.html?file=tl_files/Jannovar/Jannovar.jar -> Jannovar-bin-20150503.jar
- http://compbio.charite.de/contao/index.php/jannovar.html?file=tl_files/Jannovar/JannovarTutorial.pdf -> JannovarTutorial.pdf
- http://compbio.charite.de/contao/index.php/jannovar.html?file=tl_files/Jannovar/tutorial.tgz -> Jannovar_tutorial.tgz"
-
-# https://github.com/charite/jannovar
-LICENSE="BSD-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND=">=virtual/jdk-1.7"
-RDEPEND=">=virtual/jre-1.7"
-
-S="${WORKDIR}"
-
-src_install(){
- cp "${DISTDIR}"/Jannovar-bin-20150503.jar Jannovar-bin.jar
- java-pkg_newjar Jannovar-bin.jar
- java-pkg_dolauncher Jannovar-bin --jar Jannovar-bin.jar
-}
diff --git a/sci-biology/Jannovar-bin/metadata.xml b/sci-biology/Jannovar-bin/metadata.xml
deleted file mode 100644
index 1699e58..0000000
--- a/sci-biology/Jannovar-bin/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
-</pkgmetadata>
next reply other threads:[~2016-11-15 20:20 UTC|newest]
Thread overview: 7+ messages / expand[flat|nested] mbox.gz Atom feed top
2016-11-15 20:20 Martin Mokrejs [this message]
-- strict thread matches above, loose matches on Subject: below --
2021-01-19 13:04 [gentoo-commits] proj/sci:master commit in: sci-biology/jannovar-bin/ Andrew Ammerlaan
2016-12-04 20:15 Martin Mokrejs
2016-06-23 16:37 Martin Mokrejs
2016-06-23 16:26 Martin Mokrejs
2016-06-23 15:16 Martin Mokrejs
2015-05-05 14:29 [gentoo-commits] proj/sci:master commit in: sci-biology/Jannovar-bin/ Martin Mokrejs
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