From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 067A11395E2 for ; Tue, 15 Nov 2016 18:33:02 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 0084AE0CB2; Tue, 15 Nov 2016 18:32:59 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id DD624E0CB2 for ; Tue, 15 Nov 2016 18:32:58 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id E80153413B7 for ; Tue, 15 Nov 2016 18:32:56 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 1E4402EF for ; Tue, 15 Nov 2016 18:32:55 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1479164882.6911112e32296b390cdd2bda69aba1ae426a2031.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/VarScan/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/VarScan/VarScan-2.3.7.ebuild sci-biology/VarScan/metadata.xml X-VCS-Directories: sci-biology/VarScan/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 6911112e32296b390cdd2bda69aba1ae426a2031 X-VCS-Branch: master Date: Tue, 15 Nov 2016 18:32:55 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 38374809-3d40-481f-a6a3-f091b71cb888 X-Archives-Hash: a124da32236879a66dab977f26b0b1bc commit: 6911112e32296b390cdd2bda69aba1ae426a2031 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Mon Nov 14 23:08:02 2016 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Mon Nov 14 23:08:02 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=6911112e sci-biology/VarScan: remove a package skeleton, no sources available sci-biology/VarScan/VarScan-2.3.7.ebuild | 30 ------------------------------ sci-biology/VarScan/metadata.xml | 11 ----------- 2 files changed, 41 deletions(-) diff --git a/sci-biology/VarScan/VarScan-2.3.7.ebuild b/sci-biology/VarScan/VarScan-2.3.7.ebuild deleted file mode 100644 index f1b31c7..0000000 --- a/sci-biology/VarScan/VarScan-2.3.7.ebuild +++ /dev/null @@ -1,30 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -inherit java-pkg-2 - -DESCRIPTION="Variant detection (germline, multi-sample, somatic mut., som. cp nr alterations (CNA)), SNP calls" -HOMEPAGE="http://varscan.sourceforge.net/" - -# binary -#http://downloads.sourceforge.net/project/varscan/VarScan.v2.3.7.jar -#SRC_URI="http://downloads.sourceforge.net/project/varscan/${PN}.v${PV}.jar" -SRC_URI="http://downloads.sourceforge.net/project/varscan/${PN}.v${PV}.source.jar" - -LICENSE="Non-profit-OSL-3.0" -SLOT="0" -KEYWORDS="" -IUSE="" - -DEPEND=" - >=virtual/jdk-1.5:*" -RDEPEND=">=virtual/jre-1.5:*" - -S="${WORKDIR}"/net/sf/varscan - -src_compile(){ - javac *.java -} diff --git a/sci-biology/VarScan/metadata.xml b/sci-biology/VarScan/metadata.xml deleted file mode 100644 index fae01f1..0000000 --- a/sci-biology/VarScan/metadata.xml +++ /dev/null @@ -1,11 +0,0 @@ - - - - - sci@gentoo.org - Gentoo Science Project - - - varscan - -