From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 37054138206 for ; Mon, 1 Aug 2016 14:51:40 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 13AF3E09D2; Mon, 1 Aug 2016 14:51:39 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id A18C1E09D2 for ; Mon, 1 Aug 2016 14:51:38 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id BE23D340EB6 for ; Mon, 1 Aug 2016 14:51:36 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id B57B97CD for ; Mon, 1 Aug 2016 14:51:32 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1470063080.a253855c9986c4de6e42d8014919225814f0e3ae.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/msautil/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/msautil/metadata.xml sci-biology/msautil/msautil-1.1.ebuild X-VCS-Directories: sci-biology/msautil/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: a253855c9986c4de6e42d8014919225814f0e3ae X-VCS-Branch: master Date: Mon, 1 Aug 2016 14:51:32 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 9fed3485-82c8-4eb3-91fe-88d95b2b763c X-Archives-Hash: 8b02cc8658f1b8a649c764b196d4179d commit: a253855c9986c4de6e42d8014919225814f0e3ae Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Mon Aug 1 14:51:20 2016 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Mon Aug 1 14:51:20 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a253855c sci-biology/fas: new package, maybe public-domain license? Package-Manager: portage-2.3.0 sci-biology/msautil/metadata.xml | 12 ++++++++++++ sci-biology/msautil/msautil-1.1.ebuild | 22 ++++++++++++++++++++++ 2 files changed, 34 insertions(+) diff --git a/sci-biology/msautil/metadata.xml b/sci-biology/msautil/metadata.xml new file mode 100644 index 0000000..f68a1b6 --- /dev/null +++ b/sci-biology/msautil/metadata.xml @@ -0,0 +1,12 @@ + + + + + mmokrejs@fold.natur.cuni.cz + Martin Mokrejs + + + sci-biology@gentoo.org + Gentoo Biology Project + + diff --git a/sci-biology/msautil/msautil-1.1.ebuild b/sci-biology/msautil/msautil-1.1.ebuild new file mode 100644 index 0000000..0d2e237 --- /dev/null +++ b/sci-biology/msautil/msautil-1.1.ebuild @@ -0,0 +1,22 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Reformat/edit FASTA files and compute simple statistics (N50, quartiles, mode)" +HOMEPAGE="http://bioresearch.byu.edu/msa" +SRC_URI="http://bioresearch.byu.edu/msa/${P}.tgz" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_install(){ + dobin fac fas mscore + dodoc README.txt +}