[gentoo-commits] proj/sci:master commit in: sci-biology/SnpEff/

["Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>]

commit:     29d62487d6b5776402688fee78b2dbb47cdf3e5c
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Aug  1 12:43:59 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Aug  1 12:43:59 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=29d62487

sci-biology/SnpEff: re-order dependencies, back to EAPI=5

Package-Manager: portage-2.3.0

 sci-biology/SnpEff/SnpEff-4.2.ebuild | 11 ++++++-----
 1 file changed, 6 insertions(+), 5 deletions(-)

diff --git a/sci-biology/SnpEff/SnpEff-4.2.ebuild b/sci-biology/SnpEff/SnpEff-4.2.ebuild
index 9272b63..7cdd51c 100644
--- a/sci-biology/SnpEff/SnpEff-4.2.ebuild
+++ b/sci-biology/SnpEff/SnpEff-4.2.ebuild
@@ -2,7 +2,7 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
-EAPI=6
+EAPI=5
 
 inherit java-pkg-2 java-ant-2
 
@@ -18,12 +18,13 @@ KEYWORDS="~amd64"
 IUSE=""
 
 # https://github.com/pcingola/SnpEff/blob/master/README_release.txt
-DEPEND="
+RDEPEND="
 	>=virtual/jre-1.7:*
 	dev-java/maven-bin:*
 	dev-java/antlr:*"
-RDEPEND="${DEPEND}
-	>=virtual/jdk-1.7:*"
+DEPEND="${RDEPEND}
+	>=virtual/jdk-1.7:*
+	dev-java/ant-core"
 
 S="${WORKDIR}"
 
@@ -36,7 +37,7 @@ src_install(){
 	mkdir -p "${D}"/usr/share || die
 	# but portage does not install the .* files and subdirs, grr!
 	unzip \
-		"${DISTDIR}"/snpEff_v4_1e_core.zip -d "${D}"/usr/share \
+		"${DISTDIR}"/snpEff_v4_2_core.zip -d "${D}"/usr/share \
 		|| die "failed to unzip ${DISTDIR}/snpEff_v4_2_core.zip"
 	sed \
 		-e 's#$HOME/tools/picard/#/usr/share/picard/lib/#' \