[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Manuel Rüger]

commit:     0c8a7cbebbf25de71c7eabb9dbbcbebeaa85c4c2
Author:     Manuel Rüger <mrueg <AT> gentoo <DOT> org>
AuthorDate: Sun Mar 20 22:53:27 2016 +0000
Commit:     Manuel Rüger <mrueg <AT> gentoo <DOT> org>
CommitDate: Sun Mar 20 22:53:27 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0c8a7cbe

sci-biology/bioruby: Remove ruby19

Package-Manager: portage-2.2.28

 sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild | 4 ++--
 sci-biology/bioruby/bioruby-9999.ebuild          | 4 ++--
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
index b50f3fa..d1008a1 100644
--- a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
+++ b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2016 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
 EAPI=5
 
-USE_RUBY="ruby19 ruby20"
+USE_RUBY="ruby20"
 
 inherit ruby-fakegem
 

diff --git a/sci-biology/bioruby/bioruby-9999.ebuild b/sci-biology/bioruby/bioruby-9999.ebuild
index 838f843..08b2630 100644
--- a/sci-biology/bioruby/bioruby-9999.ebuild
+++ b/sci-biology/bioruby/bioruby-9999.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2016 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
 EAPI=5
 
-USE_RUBY="ruby19 ruby20"
+USE_RUBY="ruby20"
 EGIT_REPO_URI="git://github.com/bioruby/bioruby.git
 	https://github.com/bioruby/bioruby.git"
 

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     7c9d751d7e7f7a0de807122d6cdd0c729e7c504b
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Fri Jul 22 06:17:16 2016 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Fri Jul 22 07:00:00 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7c9d751d

sci-biology/bioruby: add ruby21

Package-Manager: portage-2.2.28

 sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild | 2 +-
 sci-biology/bioruby/bioruby-9999.ebuild          | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
index d1008a1..18f3627 100644
--- a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
+++ b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
@@ -4,7 +4,7 @@
 
 EAPI=5
 
-USE_RUBY="ruby20"
+USE_RUBY="ruby20 ruby21"
 
 inherit ruby-fakegem
 

diff --git a/sci-biology/bioruby/bioruby-9999.ebuild b/sci-biology/bioruby/bioruby-9999.ebuild
index 08b2630..ade66a0 100644
--- a/sci-biology/bioruby/bioruby-9999.ebuild
+++ b/sci-biology/bioruby/bioruby-9999.ebuild
@@ -4,7 +4,7 @@
 
 EAPI=5
 
-USE_RUBY="ruby20"
+USE_RUBY="ruby20 ruby21"
 EGIT_REPO_URI="git://github.com/bioruby/bioruby.git
 	https://github.com/bioruby/bioruby.git"
 

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[David Seifert]

commit:     31b6bd880bd8e7ea6aa19d04e40ce4c1c9bbc36b
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Mon Feb  6 20:48:02 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Mon Feb  6 21:26:11 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=31b6bd88

sci-biology/bioruby: Remove dead ruby impl

Package-Manager: Portage-2.3.3, Repoman-2.3.1
Closes: https://github.com/gentoo/gentoo/pull/3856

 sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild | 4 ++--
 sci-biology/bioruby/bioruby-9999.ebuild          | 4 ++--
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
index 18f3627..382e036 100644
--- a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
+++ b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
 EAPI=5
 
-USE_RUBY="ruby20 ruby21"
+USE_RUBY="ruby21"
 
 inherit ruby-fakegem
 

diff --git a/sci-biology/bioruby/bioruby-9999.ebuild b/sci-biology/bioruby/bioruby-9999.ebuild
index ade66a0..2aa1ff0 100644
--- a/sci-biology/bioruby/bioruby-9999.ebuild
+++ b/sci-biology/bioruby/bioruby-9999.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
 EAPI=5
 
-USE_RUBY="ruby20 ruby21"
+USE_RUBY="ruby21"
 EGIT_REPO_URI="git://github.com/bioruby/bioruby.git
 	https://github.com/bioruby/bioruby.git"
 

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Michał Górny]

commit:     99ae7c05a81b35ea344822b4973b2712daf40727
Author:     David Hicks <david <AT> hicks <DOT> id <DOT> au>
AuthorDate: Sat Jul 29 18:45:00 2017 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sun Jul 30 10:04:23 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=99ae7c05

sci-biology/bioruby: use HTTPS for GitHub, update SRC_URI and HOMEPAGE

* Use HTTPS for accessing GitHub domains
* Update SRC_URI and HOMEPAGE to remove "www" as this prefix is no
longer used on the bioruby website

Package-Manager: Portage-2.3.6, Repoman-2.3.3

 sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild | 4 ++--
 sci-biology/bioruby/bioruby-9999.ebuild          | 5 ++---
 2 files changed, 4 insertions(+), 5 deletions(-)

diff --git a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
index 42b27e09b59..8b35f96390c 100644
--- a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
+++ b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
@@ -9,8 +9,8 @@ inherit ruby-fakegem
 
 DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
 LICENSE="Ruby"
-HOMEPAGE="http://www.bioruby.org/"
-SRC_URI="http://www.${PN}.org/archive/${P}.tar.gz"
+HOMEPAGE="http://bioruby.org/"
+SRC_URI="http://${PN}.org/archive/${P}.tar.gz"
 
 SLOT="0"
 IUSE=""

diff --git a/sci-biology/bioruby/bioruby-9999.ebuild b/sci-biology/bioruby/bioruby-9999.ebuild
index de0cd75b7e0..f93d8260e3c 100644
--- a/sci-biology/bioruby/bioruby-9999.ebuild
+++ b/sci-biology/bioruby/bioruby-9999.ebuild
@@ -4,14 +4,13 @@
 EAPI=5
 
 USE_RUBY="ruby21"
-EGIT_REPO_URI="git://github.com/bioruby/bioruby.git
-	https://github.com/bioruby/bioruby.git"
+EGIT_REPO_URI="https://github.com/bioruby/bioruby.git"
 
 inherit git-2 ruby-fakegem
 
 DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
 LICENSE="Ruby"
-HOMEPAGE="http://www.bioruby.org/"
+HOMEPAGE="http://bioruby.org/"
 SRC_URI=""
 SLOT="0"
 IUSE=""

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     a161ee49ca5d12a518287c3606b97ff8a4d6a0e6
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Tue Aug 15 05:56:55 2017 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Tue Aug 15 05:58:15 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a161ee49

sci-biology/bioruby: add 1.5.1

Package-Manager: Portage-2.3.6, Repoman-2.3.2

 sci-biology/bioruby/Manifest             |  1 +
 sci-biology/bioruby/bioruby-1.5.1.ebuild | 22 ++++++++++++++++++++++
 2 files changed, 23 insertions(+)

diff --git a/sci-biology/bioruby/Manifest b/sci-biology/bioruby/Manifest
index 9c1f1499ea6..272cfd28471 100644
--- a/sci-biology/bioruby/Manifest
+++ b/sci-biology/bioruby/Manifest
@@ -1 +1,2 @@
+DIST bio-1.5.1.gem 1445376 SHA256 896c19af7e724e038baceae20c00688872b70c69ef966ef3adc42696d001b441 SHA512 822ac6c3d85847193fc1992087abc868e4d1a7cfca82da6ab1830af2927a2a582c3993bc681e129a6aac224ed1cb0b33056d8cc02d3e36d68c9d6a4153c321ca WHIRLPOOL fc8ca3cc508e5d1c95b986cb64eaf28641833498110530a625836117d4a55e9bc01e91da9cd9d71ec40de209e4adb683fff0337260d7b0d8fe30b0659bed94c6
 DIST bioruby-1.4.3.0001.tar.gz 1500656 SHA256 20d6548e1c5977464afd74019693dde9e45a030d48d974db08a7b85c4214fb35 SHA512 77ad96388e1e8b1dccab582a3bc309b99b36cac1803f79b42707fc4dbf439de31ed491ce5e1c2e59f695643756ae0df2e275bbcd9ad6827f251b52edd677d821 WHIRLPOOL ccb952d4cd3b8700acbf356a0965842b068aa2fb861dfab58e7442e5570ab79604a8be1fb86a9d80d6bc9a8f9dc886daf98cb84fe7298b4f334e0e6be198f9e7

diff --git a/sci-biology/bioruby/bioruby-1.5.1.ebuild b/sci-biology/bioruby/bioruby-1.5.1.ebuild
new file mode 100644
index 00000000000..f5e558c7ff3
--- /dev/null
+++ b/sci-biology/bioruby/bioruby-1.5.1.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+USE_RUBY="ruby21 ruby22 ruby23"
+
+RUBY_FAKEGEM_NAME="bio"
+
+RUBY_FAKEGEM_EXTRAINSTALL="etc"
+
+inherit ruby-fakegem
+
+DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
+LICENSE="Ruby"
+HOMEPAGE="http://bioruby.org/"
+
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~ppc ~x86"
+
+ruby_add_rdepend "dev-ruby/libxml"

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     5d30644ef17fdf65863b66aa084c96c4feeee40f
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Fri Aug 18 08:06:45 2017 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Sun Aug 20 08:59:12 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5d30644e

sci-biology/bioruby: remove obsolete live ebuild; add ruby22

Package-Manager: Portage-2.3.6, Repoman-2.3.2

 sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild |  2 +-
 sci-biology/bioruby/bioruby-9999.ebuild          | 39 ------------------------
 2 files changed, 1 insertion(+), 40 deletions(-)

diff --git a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
index 8b35f96390c..de7ff26eeb4 100644
--- a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
+++ b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=5
 
-USE_RUBY="ruby21"
+USE_RUBY="ruby21 ruby22"
 
 inherit ruby-fakegem
 

diff --git a/sci-biology/bioruby/bioruby-9999.ebuild b/sci-biology/bioruby/bioruby-9999.ebuild
deleted file mode 100644
index f93d8260e3c..00000000000
--- a/sci-biology/bioruby/bioruby-9999.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-USE_RUBY="ruby21"
-EGIT_REPO_URI="https://github.com/bioruby/bioruby.git"
-
-inherit git-2 ruby-fakegem
-
-DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
-LICENSE="Ruby"
-HOMEPAGE="http://bioruby.org/"
-SRC_URI=""
-SLOT="0"
-IUSE=""
-KEYWORDS=""
-
-ruby_add_rdepend "dev-ruby/libxml"
-
-all_ruby_unpack() {
-	git-2_src_unpack
-}
-
-each_ruby_configure() {
-	${RUBY} setup.rb config || die
-}
-
-each_ruby_compile() {
-	${RUBY} setup.rb setup || die
-}
-
-each_ruby_install() {
-	${RUBY} setup.rb install --prefix="${D}" || die
-}
-
-each_ruby_test() {
-	${RUBY} -rubygems test/runner.rb || die
-}

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     91aad9c3a0a355f54d44b0b94b7e66ec22d33af8
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Sat Apr 14 07:23:38 2018 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Sat Apr 14 07:25:28 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=91aad9c3

sci-biology/bioruby: remove broken ruby22-only version, bug 645612

Package-Manager: Portage-2.3.24, Repoman-2.3.6

 sci-biology/bioruby/Manifest                     |  1 -
 sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild | 37 ------------------------
 2 files changed, 38 deletions(-)

diff --git a/sci-biology/bioruby/Manifest b/sci-biology/bioruby/Manifest
index 180ec15cc3a..a03dfab501f 100644
--- a/sci-biology/bioruby/Manifest
+++ b/sci-biology/bioruby/Manifest
@@ -1,2 +1 @@
 DIST bio-1.5.1.gem 1445376 BLAKE2B 4de704293ed1c4dee7edc9c86df4ddd35f66eb4433a339fadb58c3f877206e240a8b1dfe6aa8ccd92f0edf9d0f28825cc2b58e33f817fec6bab39e3162f179cf SHA512 822ac6c3d85847193fc1992087abc868e4d1a7cfca82da6ab1830af2927a2a582c3993bc681e129a6aac224ed1cb0b33056d8cc02d3e36d68c9d6a4153c321ca
-DIST bioruby-1.4.3.0001.tar.gz 1500656 BLAKE2B 10c5a882608e33d1d9fe2cd4e07a92992a78b99ae33349d1916cd6a2fe658b553e32d1ce05edb9bfa23d7d822f6a730d6a40a098ecc05a8deb8dae49d4be7856 SHA512 77ad96388e1e8b1dccab582a3bc309b99b36cac1803f79b42707fc4dbf439de31ed491ce5e1c2e59f695643756ae0df2e275bbcd9ad6827f251b52edd677d821

diff --git a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild b/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
deleted file mode 100644
index de7ff26eeb4..00000000000
--- a/sci-biology/bioruby/bioruby-1.4.3.0001-r1.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-USE_RUBY="ruby21 ruby22"
-
-inherit ruby-fakegem
-
-DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
-LICENSE="Ruby"
-HOMEPAGE="http://bioruby.org/"
-SRC_URI="http://${PN}.org/archive/${P}.tar.gz"
-
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 ~ppc x86"
-
-ruby_add_rdepend "dev-ruby/libxml"
-
-PATCHES=( "${FILESDIR}"/${P}-fix-tests.patch )
-
-each_ruby_configure() {
-	${RUBY} setup.rb config || die
-}
-
-each_ruby_compile() {
-	${RUBY} setup.rb setup || die
-}
-
-each_ruby_install() {
-	${RUBY} setup.rb install --prefix="${D}" || die
-}
-
-each_ruby_test() {
-	${RUBY} -rubygems test/runner.rb || die
-}

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     67bdcf4734eb37aa0c984f8a97eda4212e54719d
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Sat Apr 14 07:21:47 2018 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Sat Apr 14 07:25:25 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=67bdcf47

sci-biology/bioruby: stable on amd64 and x86, bug 628636

Package-Manager: Portage-2.3.24, Repoman-2.3.6

 sci-biology/bioruby/bioruby-1.5.1.ebuild | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/sci-biology/bioruby/bioruby-1.5.1.ebuild b/sci-biology/bioruby/bioruby-1.5.1.ebuild
index f5e558c7ff3..d6458528127 100644
--- a/sci-biology/bioruby/bioruby-1.5.1.ebuild
+++ b/sci-biology/bioruby/bioruby-1.5.1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
 
-USE_RUBY="ruby21 ruby22 ruby23"
+USE_RUBY="ruby22 ruby23"
 
 RUBY_FAKEGEM_NAME="bio"
 
@@ -17,6 +17,6 @@ HOMEPAGE="http://bioruby.org/"
 
 SLOT="0"
 IUSE=""
-KEYWORDS="~amd64 ~ppc ~x86"
+KEYWORDS="amd64 ~ppc x86"
 
 ruby_add_rdepend "dev-ruby/libxml"

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     8edfbea18c09a62f31b9df331edfdc7b771ec58b
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Sun May  6 08:25:33 2018 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Sun May  6 16:18:00 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8edfbea1

sci-biology/bioruby: add ruby24

Package-Manager: Portage-2.3.24, Repoman-2.3.6

 sci-biology/bioruby/bioruby-1.5.1.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/bioruby/bioruby-1.5.1.ebuild b/sci-biology/bioruby/bioruby-1.5.1.ebuild
index d6458528127..036b3be29b3 100644
--- a/sci-biology/bioruby/bioruby-1.5.1.ebuild
+++ b/sci-biology/bioruby/bioruby-1.5.1.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=6
 
-USE_RUBY="ruby22 ruby23"
+USE_RUBY="ruby23 ruby24"
 
 RUBY_FAKEGEM_NAME="bio"
 

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     264ee7ff4bbe0d64ecbe1b06346a97198c95cab9
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Sun Feb 24 09:10:21 2019 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Sun Feb 24 15:21:36 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=264ee7ff

sci-biology/bioruby: add 1.5.2

Signed-off-by: Hans de Graaff <graaff <AT> gentoo.org>
Package-Manager: Portage-2.3.51, Repoman-2.3.11

 sci-biology/bioruby/Manifest             |  1 +
 sci-biology/bioruby/bioruby-1.5.2.ebuild | 22 ++++++++++++++++++++++
 2 files changed, 23 insertions(+)

diff --git a/sci-biology/bioruby/Manifest b/sci-biology/bioruby/Manifest
index a03dfab501f..1acf988b81a 100644
--- a/sci-biology/bioruby/Manifest
+++ b/sci-biology/bioruby/Manifest
@@ -1 +1,2 @@
 DIST bio-1.5.1.gem 1445376 BLAKE2B 4de704293ed1c4dee7edc9c86df4ddd35f66eb4433a339fadb58c3f877206e240a8b1dfe6aa8ccd92f0edf9d0f28825cc2b58e33f817fec6bab39e3162f179cf SHA512 822ac6c3d85847193fc1992087abc868e4d1a7cfca82da6ab1830af2927a2a582c3993bc681e129a6aac224ed1cb0b33056d8cc02d3e36d68c9d6a4153c321ca
+DIST bio-1.5.2.gem 1447424 BLAKE2B 6377f7c546faef188d43b1e612f1924f5ab2db3a0017fac1f1b124b6cdf7caf4b66dde53d957d0a733601e3c928f0a84b18ae9da930f4a4908ab236f9365d385 SHA512 a0c4be950ef2983f07e8b9d0ac217310d80d91139ca0edb0263d8ae0a35e62fc07a21861ab26d8bace40003f0d9de4dce1be8f02c7d6d0f4afe3eb3debe3d5cd

diff --git a/sci-biology/bioruby/bioruby-1.5.2.ebuild b/sci-biology/bioruby/bioruby-1.5.2.ebuild
new file mode 100644
index 00000000000..69854312675
--- /dev/null
+++ b/sci-biology/bioruby/bioruby-1.5.2.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+USE_RUBY="ruby23 ruby24"
+
+RUBY_FAKEGEM_NAME="bio"
+
+RUBY_FAKEGEM_EXTRAINSTALL="etc"
+
+inherit ruby-fakegem
+
+DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
+LICENSE="Ruby"
+HOMEPAGE="http://bioruby.org/"
+
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~ppc ~x86"
+
+ruby_add_rdepend "dev-ruby/libxml"

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Thomas Deutschmann]

commit:     850e5fee33c2e2e1ec29775525fcba9ad38aa20b
Author:     Thomas Deutschmann <whissi <AT> gentoo <DOT> org>
AuthorDate: Sat Sep  7 18:09:26 2019 +0000
Commit:     Thomas Deutschmann <whissi <AT> gentoo <DOT> org>
CommitDate: Sat Sep  7 21:05:05 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=850e5fee

sci-biology/bioruby: x86 stable (bug #690048)

Package-Manager: Portage-2.3.75, Repoman-2.3.17
Signed-off-by: Thomas Deutschmann <whissi <AT> gentoo.org>

 sci-biology/bioruby/bioruby-1.5.2.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/bioruby/bioruby-1.5.2.ebuild b/sci-biology/bioruby/bioruby-1.5.2.ebuild
index 69854312675..3ef1921ce4d 100644
--- a/sci-biology/bioruby/bioruby-1.5.2.ebuild
+++ b/sci-biology/bioruby/bioruby-1.5.2.ebuild
@@ -17,6 +17,6 @@ HOMEPAGE="http://bioruby.org/"
 
 SLOT="0"
 IUSE=""
-KEYWORDS="~amd64 ~ppc ~x86"
+KEYWORDS="~amd64 ~ppc x86"
 
 ruby_add_rdepend "dev-ruby/libxml"

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Agostino Sarubbo]

commit:     7ca32f362657ad7186c30a0cb47d006de8722e13
Author:     Agostino Sarubbo <ago <AT> gentoo <DOT> org>
AuthorDate: Sun Sep  8 10:41:59 2019 +0000
Commit:     Agostino Sarubbo <ago <AT> gentoo <DOT> org>
CommitDate: Sun Sep  8 10:41:59 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7ca32f36

sci-biology/bioruby: amd64 stable wrt bug #690048

Package-Manager: Portage-2.3.69, Repoman-2.3.16
RepoMan-Options: --include-arches="amd64"
Signed-off-by: Agostino Sarubbo <ago <AT> gentoo.org>

 sci-biology/bioruby/bioruby-1.5.2.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/bioruby/bioruby-1.5.2.ebuild b/sci-biology/bioruby/bioruby-1.5.2.ebuild
index 3ef1921ce4d..7977f4073da 100644
--- a/sci-biology/bioruby/bioruby-1.5.2.ebuild
+++ b/sci-biology/bioruby/bioruby-1.5.2.ebuild
@@ -17,6 +17,6 @@ HOMEPAGE="http://bioruby.org/"
 
 SLOT="0"
 IUSE=""
-KEYWORDS="~amd64 ~ppc x86"
+KEYWORDS="amd64 ~ppc x86"
 
 ruby_add_rdepend "dev-ruby/libxml"

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/

[Hans de Graaff]

commit:     3ded18d070f8b5b5c4a73850092b3cd96d4a576e
Author:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
AuthorDate: Sat May 23 05:30:21 2020 +0000
Commit:     Hans de Graaff <graaff <AT> gentoo <DOT> org>
CommitDate: Sat May 23 05:30:21 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3ded18d0

sci-biology/bioruby: remove masked package

Signed-off-by: Hans de Graaff <graaff <AT> gentoo.org>

 sci-biology/bioruby/Manifest             |  2 --
 sci-biology/bioruby/bioruby-1.5.1.ebuild | 22 ----------------------
 sci-biology/bioruby/bioruby-1.5.2.ebuild | 22 ----------------------
 sci-biology/bioruby/metadata.xml         |  8 --------
 4 files changed, 54 deletions(-)

diff --git a/sci-biology/bioruby/Manifest b/sci-biology/bioruby/Manifest
deleted file mode 100644
index 1acf988b81a..00000000000
--- a/sci-biology/bioruby/Manifest
+++ /dev/null
@@ -1,2 +0,0 @@
-DIST bio-1.5.1.gem 1445376 BLAKE2B 4de704293ed1c4dee7edc9c86df4ddd35f66eb4433a339fadb58c3f877206e240a8b1dfe6aa8ccd92f0edf9d0f28825cc2b58e33f817fec6bab39e3162f179cf SHA512 822ac6c3d85847193fc1992087abc868e4d1a7cfca82da6ab1830af2927a2a582c3993bc681e129a6aac224ed1cb0b33056d8cc02d3e36d68c9d6a4153c321ca
-DIST bio-1.5.2.gem 1447424 BLAKE2B 6377f7c546faef188d43b1e612f1924f5ab2db3a0017fac1f1b124b6cdf7caf4b66dde53d957d0a733601e3c928f0a84b18ae9da930f4a4908ab236f9365d385 SHA512 a0c4be950ef2983f07e8b9d0ac217310d80d91139ca0edb0263d8ae0a35e62fc07a21861ab26d8bace40003f0d9de4dce1be8f02c7d6d0f4afe3eb3debe3d5cd

diff --git a/sci-biology/bioruby/bioruby-1.5.1.ebuild b/sci-biology/bioruby/bioruby-1.5.1.ebuild
deleted file mode 100644
index 036b3be29b3..00000000000
--- a/sci-biology/bioruby/bioruby-1.5.1.ebuild
+++ /dev/null
@@ -1,22 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-USE_RUBY="ruby23 ruby24"
-
-RUBY_FAKEGEM_NAME="bio"
-
-RUBY_FAKEGEM_EXTRAINSTALL="etc"
-
-inherit ruby-fakegem
-
-DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
-LICENSE="Ruby"
-HOMEPAGE="http://bioruby.org/"
-
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 ~ppc x86"
-
-ruby_add_rdepend "dev-ruby/libxml"

diff --git a/sci-biology/bioruby/bioruby-1.5.2.ebuild b/sci-biology/bioruby/bioruby-1.5.2.ebuild
deleted file mode 100644
index 7977f4073da..00000000000
--- a/sci-biology/bioruby/bioruby-1.5.2.ebuild
+++ /dev/null
@@ -1,22 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-USE_RUBY="ruby23 ruby24"
-
-RUBY_FAKEGEM_NAME="bio"
-
-RUBY_FAKEGEM_EXTRAINSTALL="etc"
-
-inherit ruby-fakegem
-
-DESCRIPTION="An integrated environment for bioinformatics using the Ruby language"
-LICENSE="Ruby"
-HOMEPAGE="http://bioruby.org/"
-
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 ~ppc x86"
-
-ruby_add_rdepend "dev-ruby/libxml"

diff --git a/sci-biology/bioruby/metadata.xml b/sci-biology/bioruby/metadata.xml
deleted file mode 100644
index 8417d1580d4..00000000000
--- a/sci-biology/bioruby/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-</pkgmetadata>