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* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2015-12-02 22:21 Martin Mokrejs
  0 siblings, 0 replies; 10+ messages in thread
From: Martin Mokrejs @ 2015-12-02 22:21 UTC (permalink / raw
  To: gentoo-commits

commit:     4c9b70f59eea90bb9506dad00c536c7a89b6cf50
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Dec  2 22:21:09 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed Dec  2 22:21:09 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=4c9b70f5

sci-biology/full_lengther_next: new package

Package-Manager: portage-2.2.26

 sci-biology/full_lengther_next/ChangeLog           |  9 +++++++
 .../full_lengther_next-0.0.8.ebuild                | 30 ++++++++++++++++++++++
 sci-biology/full_lengther_next/metadata.xml        | 12 +++++++++
 3 files changed, 51 insertions(+)

diff --git a/sci-biology/full_lengther_next/ChangeLog b/sci-biology/full_lengther_next/ChangeLog
new file mode 100644
index 0000000..641611d
--- /dev/null
+++ b/sci-biology/full_lengther_next/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/full_lengther_next
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Id$
+
+*full_lengther_next-0.0.8 (02 Dec 2015)
+
+  02 Dec 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  +full_lengther_next-0.0.8.ebuild, +metadata.xml:
+  sci-biology/full_lengther_next: new package

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild
new file mode 100644
index 0000000..77908a9
--- /dev/null
+++ b/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild
@@ -0,0 +1,30 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+USE_RUBY="ruby19 ruby20 ruby21"
+
+RUBY_FAKEGEM_TASK_DOC=""
+RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt"
+
+inherit ruby-fakegem
+
+DESCRIPTION="Classify assembled transcripts and fix frameshifts in ORFs"
+HOMEPAGE="http://www.scbi.uma.es/site/scbi/downloads/313-full-lengthernext"
+# https://rubygems.org/gems/full_lengther_next/versions/0.0.8
+# http://www.rubydoc.info/gems/full_lengther_next/0.0.8/frames
+# https://www.omniref.com/ruby/gems/full_lengther_next/0.0.8/symbols/FullLengtherNext
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=">=dev-ruby/hoe-2.8.0"
+RDEPEND="${DEPEND}
+	>=sci-biology/scbi_blast-0.0.37
+	>=sci-biology/scbi_fasta-0.1.7
+	>=sci-biology/scbi_mapreduce-0.0.29
+	>=sci-biology/scbi_plot-0.0.6
+	>=dev-ruby/xml-simple-1.0.12"

diff --git a/sci-biology/full_lengther_next/metadata.xml b/sci-biology/full_lengther_next/metadata.xml
new file mode 100644
index 0000000..5fa67e9
--- /dev/null
+++ b/sci-biology/full_lengther_next/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+  <upstream>
+    <remote-id type="github">trinityrnaseq/trinityrnaseq</remote-id>
+  </upstream>
+</pkgmetadata>


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2015-12-25 21:00 Marius Brehler
  0 siblings, 0 replies; 10+ messages in thread
From: Marius Brehler @ 2015-12-25 21:00 UTC (permalink / raw
  To: gentoo-commits

commit:     2838a866558aaa6a54eb8b070f0a25fe18d9410d
Author:     Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
AuthorDate: Fri Dec 25 20:54:34 2015 +0000
Commit:     Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
CommitDate: Fri Dec 25 20:54:34 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=2838a866

sci-biology/full_lengther_next: Fix header, remove ruby19

Package-Manager: portage-2.2.24

 sci-biology/full_lengther_next/ChangeLog                       | 4 ++++
 sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild | 4 ++--
 2 files changed, 6 insertions(+), 2 deletions(-)

diff --git a/sci-biology/full_lengther_next/ChangeLog b/sci-biology/full_lengther_next/ChangeLog
index 641611d..6ae9e13 100644
--- a/sci-biology/full_lengther_next/ChangeLog
+++ b/sci-biology/full_lengther_next/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Id$
 
+  25 Dec 2015; Marius Brehler <marbre@linux.sungazer.de>
+  full_lengther_next-0.0.8.ebuild:
+  sci-biology/full_lengther_next: Fix header, remove ruby19
+
 *full_lengther_next-0.0.8 (02 Dec 2015)
 
   02 Dec 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild
index 77908a9..0465bc0 100644
--- a/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild
+++ b/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild
@@ -1,9 +1,9 @@
 # Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: $
+# $Id$
 
 EAPI=5
-USE_RUBY="ruby19 ruby20 ruby21"
+USE_RUBY="ruby20 ruby21"
 
 RUBY_FAKEGEM_TASK_DOC=""
 RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt"


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2016-03-13  0:17 Martin Mokrejs
  0 siblings, 0 replies; 10+ messages in thread
From: Martin Mokrejs @ 2016-03-13  0:17 UTC (permalink / raw
  To: gentoo-commits

commit:     647b66f0280dbf78d736abbe107f3fd93996616f
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 13 00:13:19 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Mar 13 00:13:19 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=647b66f0

sci-biology/full_lengther_next: version bump

Package-Manager: portage-2.2.26

 .../{full_lengther_next-0.5.6.ebuild => full_lengther_next-0.5.7.ebuild}  | 0
 1 file changed, 0 insertions(+), 0 deletions(-)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.5.6.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild
similarity index 100%
rename from sci-biology/full_lengther_next/full_lengther_next-0.5.6.ebuild
rename to sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild


^ permalink raw reply	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2016-03-13 17:34 Martin Mokrejs
  0 siblings, 0 replies; 10+ messages in thread
From: Martin Mokrejs @ 2016-03-13 17:34 UTC (permalink / raw
  To: gentoo-commits

commit:     4df929cb91f6716fb1702ad0c92689c44b4bbd89
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 13 17:30:53 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Mar 13 17:30:53 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=4df929cb

sci-biology/full_lengther_next: added more DEPENDencies, added more relevant HOMEPAGE

Package-Manager: portage-2.2.26

 .../full_lengther_next/full_lengther_next-0.5.7.ebuild       | 12 ++++++++----
 1 file changed, 8 insertions(+), 4 deletions(-)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild
index 52412c0..1f3476f 100644
--- a/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild
+++ b/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild
@@ -11,9 +11,10 @@ RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt"
 inherit ruby-fakegem
 
 DESCRIPTION="Classify assembled transcripts and fix frameshifts in ORFs"
-HOMEPAGE="http://www.scbi.uma.es/site/scbi/downloads/313-full-lengthernext"
+HOMEPAGE="http://www.rubydoc.info/gems/full_lengther_next
+	http://www.scbi.uma.es/site/scbi/downloads/313-full-lengthernext"
 # https://rubygems.org/gems/full_lengther_next/versions/0.0.8
-# http://www.rubydoc.info/gems/full_lengther_next/0.0.8/frames
+# http://www.rubydoc.info/gems/full_lengther_next
 # https://www.omniref.com/ruby/gems/full_lengther_next/0.0.8/symbols/FullLengtherNext
 
 LICENSE="MIT"
@@ -21,13 +22,16 @@ SLOT="0"
 KEYWORDS="~amd64"
 IUSE=""
 
-DEPEND=">=dev-ruby/hoe-2.8.0"
+DEPEND=">=dev-ruby/hoe-2.8.0
+	dev-ruby/bundler"
 RDEPEND="${DEPEND}
+	sci-biology/bioruby
 	>=sci-biology/scbi_blast-0.0.37
 	>=sci-biology/scbi_fasta-0.1.7
 	>=sci-biology/scbi_mapreduce-0.0.29
 	>=sci-biology/scbi_plot-0.0.6
-	>=dev-ruby/xml-simple-1.0.12"
+	>=dev-ruby/xml-simple-1.0.12
+	>=dev-ruby/gnuplot-2.3.0"
 
 #src_prepare(){
 #	cp "${FILESDIR}"/download_fln_dbs.rb all/full_lengther_next-0.0.8/bin || die


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2016-04-27 18:10 Martin Mokrejs
  0 siblings, 0 replies; 10+ messages in thread
From: Martin Mokrejs @ 2016-04-27 18:10 UTC (permalink / raw
  To: gentoo-commits

commit:     38be5e9dfc05edf1648b9e6a4818d94117dc6d6b
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Apr 27 18:09:55 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed Apr 27 18:09:55 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=38be5e9d

sci-biology/full_lengther_next: version bump; added more new DEPSs

Package-Manager: portage-2.2.28

 sci-biology/full_lengther_next/full_lengther_next-0.6.0.ebuild | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.6.0.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.6.0.ebuild
index 64d300a..4348fcf 100644
--- a/sci-biology/full_lengther_next/full_lengther_next-0.6.0.ebuild
+++ b/sci-biology/full_lengther_next/full_lengther_next-0.6.0.ebuild
@@ -23,11 +23,15 @@ KEYWORDS="~amd64"
 IUSE=""
 
 DEPEND=">=dev-ruby/hoe-2.8.0
+	>=dev-ruby/rdoc-3.10
 	dev-ruby/bundler"
+	# >=dev-ruby/newgem-1.5.3
 RDEPEND="${DEPEND}
 	sci-biology/bioruby
+	>=sci-biology/bio-cd-hit-report-0.1.0
 	>=sci-biology/scbi_blast-0.0.37
 	>=sci-biology/scbi_fasta-0.1.7
+	>=sci-biology/scbi_zcat-0.0.2
 	>=sci-biology/scbi_mapreduce-0.0.29
 	>=sci-biology/scbi_plot-0.0.6
 	>=dev-ruby/xml-simple-1.0.12


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2016-05-03 16:39 Martin Mokrejs
  0 siblings, 0 replies; 10+ messages in thread
From: Martin Mokrejs @ 2016-05-03 16:39 UTC (permalink / raw
  To: gentoo-commits

commit:     3629be6ae68b81f8f11f010edec9d57772d3cf59
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue May  3 16:39:23 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue May  3 16:39:23 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=3629be6a

sci-biology/full_lengther_next: version bump

Package-Manager: portage-2.2.28

 .../{full_lengther_next-0.6.0.ebuild => full_lengther_next-0.6.1.ebuild}  | 0
 1 file changed, 0 insertions(+), 0 deletions(-)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.6.0.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.6.1.ebuild
similarity index 100%
rename from sci-biology/full_lengther_next/full_lengther_next-0.6.0.ebuild
rename to sci-biology/full_lengther_next/full_lengther_next-0.6.1.ebuild


^ permalink raw reply	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2016-05-07 14:37 Martin Mokrejs
  0 siblings, 0 replies; 10+ messages in thread
From: Martin Mokrejs @ 2016-05-07 14:37 UTC (permalink / raw
  To: gentoo-commits

commit:     268b423672eb86dd87e9db1029a21447f1dae3b4
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sat May  7 14:36:25 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sat May  7 14:36:25 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=268b4236

sci-biology/full_lengther_next: version bump

Package-Manager: portage-2.2.28

 .../{full_lengther_next-0.6.1.ebuild => full_lengther_next-0.6.2.ebuild}  | 0
 1 file changed, 0 insertions(+), 0 deletions(-)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.6.1.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
similarity index 100%
rename from sci-biology/full_lengther_next/full_lengther_next-0.6.1.ebuild
rename to sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild


^ permalink raw reply	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2017-03-26 14:45 Justin Lecher
  0 siblings, 0 replies; 10+ messages in thread
From: Justin Lecher @ 2017-03-26 14:45 UTC (permalink / raw
  To: gentoo-commits

commit:     2d80fd5e11977e2747dba7ac7737358599f08ac1
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Mar 26 08:56:59 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Mar 26 08:56:59 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=2d80fd5e

sci-biology/full_lengther_next: Drop obsolete ruby version

Package-Manager: Portage-2.3.5, Repoman-2.3.2
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild | 10 ++++++----
 1 file changed, 6 insertions(+), 4 deletions(-)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
index 5e2cb404d..262ffddf5 100644
--- a/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
+++ b/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
@@ -1,8 +1,9 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
-USE_RUBY="ruby20 ruby21"
+EAPI=6
+
+USE_RUBY="ruby21"
 
 RUBY_FAKEGEM_TASK_DOC=""
 RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt"
@@ -21,7 +22,8 @@ SLOT="0"
 KEYWORDS="~amd64"
 IUSE=""
 
-DEPEND=">=dev-ruby/hoe-2.8.0
+DEPEND="
+	>=dev-ruby/hoe-2.8.0
 	>=dev-ruby/rdoc-3.10
 	dev-ruby/bundler"
 	# >=dev-ruby/newgem-1.5.3


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2017-09-02 11:55 David Seifert
  0 siblings, 0 replies; 10+ messages in thread
From: David Seifert @ 2017-09-02 11:55 UTC (permalink / raw
  To: gentoo-commits

commit:     7e131dda52252fc29eed23acaa32a7add89c2ad2
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Sep  2 11:55:25 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Sep  2 11:55:25 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7e131dda

sci-biology/full_lengther_next: Update USE_RUBY to fix breakages

Package-Manager: Portage-2.3.8, Repoman-2.3.3

 sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
index 262ffddf5..c333d2990 100644
--- a/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
+++ b/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=6
 
-USE_RUBY="ruby21"
+USE_RUBY="ruby22 ruby23 ruby24"
 
 RUBY_FAKEGEM_TASK_DOC=""
 RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt"


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/
@ 2020-09-27 21:24 Horea Christian
  0 siblings, 0 replies; 10+ messages in thread
From: Horea Christian @ 2020-09-27 21:24 UTC (permalink / raw
  To: gentoo-commits

commit:     567a970b095f1da61430fb8ffdcb421b26280d76
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 27 21:15:41 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 27 21:15:41 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=567a970b

sci-biology/full_lengther_next: removed unmaintained package

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 .../full_lengther_next-0.6.2.ebuild                | 39 ----------------------
 sci-biology/full_lengther_next/metadata.xml        | 12 -------
 2 files changed, 51 deletions(-)

diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
deleted file mode 100644
index c333d2990..000000000
--- a/sci-biology/full_lengther_next/full_lengther_next-0.6.2.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-USE_RUBY="ruby22 ruby23 ruby24"
-
-RUBY_FAKEGEM_TASK_DOC=""
-RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt"
-
-inherit ruby-fakegem
-
-DESCRIPTION="Classify assembled transcripts and fix frameshifts in ORFs"
-HOMEPAGE="http://www.rubydoc.info/gems/full_lengther_next
-	http://www.scbi.uma.es/site/scbi/downloads/313-full-lengthernext"
-# https://rubygems.org/gems/full_lengther_next/versions/0.0.8
-# http://www.rubydoc.info/gems/full_lengther_next
-# https://www.omniref.com/ruby/gems/full_lengther_next/0.0.8/symbols/FullLengtherNext
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND="
-	>=dev-ruby/hoe-2.8.0
-	>=dev-ruby/rdoc-3.10
-	dev-ruby/bundler"
-	# >=dev-ruby/newgem-1.5.3
-RDEPEND="${DEPEND}
-	sci-biology/bioruby
-	>=sci-biology/bio-cd-hit-report-0.1.0
-	>=sci-biology/scbi_blast-0.0.37
-	>=sci-biology/scbi_fasta-0.1.7
-	>=sci-biology/scbi_zcat-0.0.2
-	>=sci-biology/scbi_mapreduce-0.0.29
-	>=sci-biology/scbi_plot-0.0.6
-	>=dev-ruby/xml-simple-1.0.12
-	>=dev-ruby/gnuplot-2.3.0"

diff --git a/sci-biology/full_lengther_next/metadata.xml b/sci-biology/full_lengther_next/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/full_lengther_next/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mmokrejs@fold.natur.cuni.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-</pkgmetadata>


^ permalink raw reply related	[flat|nested] 10+ messages in thread

end of thread, other threads:[~2020-09-27 21:24 UTC | newest]

Thread overview: 10+ messages (download: mbox.gz follow: Atom feed
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2016-05-07 14:37 [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/ Martin Mokrejs
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2020-09-27 21:24 Horea Christian
2017-09-02 11:55 David Seifert
2017-03-26 14:45 Justin Lecher
2016-05-03 16:39 Martin Mokrejs
2016-04-27 18:10 Martin Mokrejs
2016-03-13 17:34 Martin Mokrejs
2016-03-13  0:17 Martin Mokrejs
2015-12-25 21:00 Marius Brehler
2015-12-02 22:21 Martin Mokrejs

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