[gentoo-commits] proj/sci:master commit in: sci-biology/reaper/

[gentoo-commits] proj/sci:master commit in: sci-biology/reaper/

[Martin Mokrejs]

commit:     47b7a318764888d66daf35b7c8764c08a80f318d
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Apr 10 20:28:25 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Apr 10 20:28:25 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=47b7a318

sci-biology/reaper: new package

Package-Manager: portage-2.2.28

 sci-biology/reaper/metadata.xml        | 12 ++++++++++++
 sci-biology/reaper/reaper-15348.ebuild | 34 ++++++++++++++++++++++++++++++++++
 2 files changed, 46 insertions(+)

diff --git a/sci-biology/reaper/metadata.xml b/sci-biology/reaper/metadata.xml
new file mode 100644
index 0000000..f68a1b6
--- /dev/null
+++ b/sci-biology/reaper/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="person">
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+  <maintainer type="project">
+    <email>sci-biology@gentoo.org</email>
+    <name>Gentoo Biology Project</name>
+  </maintainer>
+</pkgmetadata>

diff --git a/sci-biology/reaper/reaper-15348.ebuild b/sci-biology/reaper/reaper-15348.ebuild
new file mode 100644
index 0000000..854668d
--- /dev/null
+++ b/sci-biology/reaper/reaper-15348.ebuild
@@ -0,0 +1,34 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+MY_PV="15-348"
+
+DESCRIPTION="Demultiplex, trim 3'-adapter/polyA and filter short read DNA sequences"
+HOMEPAGE="http://www.ebi.ac.uk/~stijn/reaper"
+SRC_URI="http://www.ebi.ac.uk/~stijn/reaper/src/${PN}-${MY_PV}.tgz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND="sys-libs/zlib"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}"/"${PN}"-"${MY_PV}"/src
+
+src_prepare(){
+	sed -e 's/ -O3 / ${CFLAGS} /' -i Makefile || die
+}
+
+src_compile(){
+	emake
+}
+
+src_install(){
+	dobin reaper tally minion swan
+	dodoc ../doc/*.html
+}

[gentoo-commits] proj/sci:master commit in: sci-biology/reaper/

[Andrew Ammerlaan]

commit:     8d3c7043fd4b319ef99a1567882d5e7ae994593b
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Mar  6 13:36:47 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sat Mar  6 13:36:47 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8d3c7043

sci-biology/reaper: remove pack, upstream gone

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-biology/reaper/metadata.xml        | 12 ------------
 sci-biology/reaper/reaper-15348.ebuild | 33 ---------------------------------
 2 files changed, 45 deletions(-)

diff --git a/sci-biology/reaper/metadata.xml b/sci-biology/reaper/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/reaper/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mmokrejs@fold.natur.cuni.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-biology/reaper/reaper-15348.ebuild b/sci-biology/reaper/reaper-15348.ebuild
deleted file mode 100644
index 6609bc06f..000000000
--- a/sci-biology/reaper/reaper-15348.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-MY_PV="15-348"
-
-DESCRIPTION="Demultiplex, trim 3'-adapter/polyA and filter short read DNA sequences"
-HOMEPAGE="http://www.ebi.ac.uk/~stijn/reaper"
-SRC_URI="http://www.ebi.ac.uk/~stijn/reaper/src/${PN}-${MY_PV}.tgz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND="sys-libs/zlib"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}"/"${PN}"-"${MY_PV}"/src
-
-src_prepare(){
-	sed -e 's/ -O3 / ${CFLAGS} /' -i Makefile || die
-}
-
-src_compile(){
-	emake
-}
-
-src_install(){
-	dobin reaper tally minion swan
-	dodoc ../doc/*.html
-}