From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id E7D2359CAF for ; Fri, 1 Apr 2016 19:14:35 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 9968121C003; Fri, 1 Apr 2016 19:14:33 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 36C9321C003 for ; Fri, 1 Apr 2016 19:14:32 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 050A7340D5B for ; Fri, 1 Apr 2016 19:14:32 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 9A7B17B for ; Fri, 1 Apr 2016 19:14:25 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1459537910.efe8a4f25b66f0f3dbd800e26d8f12973330b5c8.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/MolBioLib/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/MolBioLib/MolBioLib-5.ebuild sci-biology/MolBioLib/metadata.xml X-VCS-Directories: sci-biology/MolBioLib/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: efe8a4f25b66f0f3dbd800e26d8f12973330b5c8 X-VCS-Branch: master Date: Fri, 1 Apr 2016 19:14:25 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 5baa3451-7216-4124-a7ef-e4a290779024 X-Archives-Hash: 33ef5e8bf54bca10096b420003cdcf16 commit: efe8a4f25b66f0f3dbd800e26d8f12973330b5c8 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Fri Apr 1 19:11:50 2016 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Fri Apr 1 19:11:50 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=efe8a4f2 sci-biology/MolBioLib: yet another package with bundled samtools, bamtools etc. Package-Manager: portage-2.2.28 sci-biology/MolBioLib/MolBioLib-5.ebuild | 31 +++++++++++++++++++++++++++++++ sci-biology/MolBioLib/metadata.xml | 12 ++++++++++++ 2 files changed, 43 insertions(+) diff --git a/sci-biology/MolBioLib/MolBioLib-5.ebuild b/sci-biology/MolBioLib/MolBioLib-5.ebuild new file mode 100644 index 0000000..5cb9ea2 --- /dev/null +++ b/sci-biology/MolBioLib/MolBioLib-5.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +DESCRIPTION="C++11 framework for rapid develop and deploy of bioinformatic tasks" +HOMEPAGE="https://sourceforge.net/projects/molbiolib" +SRC_URI="https://sourceforge.net/projects/molbiolib/files/MolBioLib_public.version${PV}.tar.gz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="" +IUSE="" + +# contains bundled samtools-0.1.18 and bamtools (pezmaster31-bamtools-d553a62) which contains jsoncpp +# also needs app-doc/doxygen +DEPEND="dev-lang/perl + sys-devel/gcc:* + sys-devel/clang + >=sci-biology/samtools-0.1.18:0 + + + + + mmokrejs@fold.natur.cuni.cz + Martin Mokrejs + + + sci-biology@gentoo.org + Gentoo Biology Project + +