From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id B395559CA3 for ; Sun, 13 Mar 2016 17:34:46 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id D38C7E0895; Sun, 13 Mar 2016 17:34:43 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 674D1E0895 for ; Sun, 13 Mar 2016 17:34:42 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 555F8340AF3 for ; Sun, 13 Mar 2016 17:34:41 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id B5303822 for ; Sun, 13 Mar 2016 17:34:36 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1457890253.4df929cb91f6716fb1702ad0c92689c44b4bbd89.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/full_lengther_next/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild X-VCS-Directories: sci-biology/full_lengther_next/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 4df929cb91f6716fb1702ad0c92689c44b4bbd89 X-VCS-Branch: master Date: Sun, 13 Mar 2016 17:34:36 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 5edb4812-721d-491c-a6d7-d2a10fe567a6 X-Archives-Hash: a6e3dc92e0f7cc51508bfe5c5d844d34 commit: 4df929cb91f6716fb1702ad0c92689c44b4bbd89 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Sun Mar 13 17:30:53 2016 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Sun Mar 13 17:30:53 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4df929cb sci-biology/full_lengther_next: added more DEPENDencies, added more relevant HOMEPAGE Package-Manager: portage-2.2.26 .../full_lengther_next/full_lengther_next-0.5.7.ebuild | 12 ++++++++---- 1 file changed, 8 insertions(+), 4 deletions(-) diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild index 52412c0..1f3476f 100644 --- a/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild +++ b/sci-biology/full_lengther_next/full_lengther_next-0.5.7.ebuild @@ -11,9 +11,10 @@ RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt" inherit ruby-fakegem DESCRIPTION="Classify assembled transcripts and fix frameshifts in ORFs" -HOMEPAGE="http://www.scbi.uma.es/site/scbi/downloads/313-full-lengthernext" +HOMEPAGE="http://www.rubydoc.info/gems/full_lengther_next + http://www.scbi.uma.es/site/scbi/downloads/313-full-lengthernext" # https://rubygems.org/gems/full_lengther_next/versions/0.0.8 -# http://www.rubydoc.info/gems/full_lengther_next/0.0.8/frames +# http://www.rubydoc.info/gems/full_lengther_next # https://www.omniref.com/ruby/gems/full_lengther_next/0.0.8/symbols/FullLengtherNext LICENSE="MIT" @@ -21,13 +22,16 @@ SLOT="0" KEYWORDS="~amd64" IUSE="" -DEPEND=">=dev-ruby/hoe-2.8.0" +DEPEND=">=dev-ruby/hoe-2.8.0 + dev-ruby/bundler" RDEPEND="${DEPEND} + sci-biology/bioruby >=sci-biology/scbi_blast-0.0.37 >=sci-biology/scbi_fasta-0.1.7 >=sci-biology/scbi_mapreduce-0.0.29 >=sci-biology/scbi_plot-0.0.6 - >=dev-ruby/xml-simple-1.0.12" + >=dev-ruby/xml-simple-1.0.12 + >=dev-ruby/gnuplot-2.3.0" #src_prepare(){ # cp "${FILESDIR}"/download_fln_dbs.rb all/full_lengther_next-0.0.8/bin || die