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From: "Justin Lecher" <jlec@gentoo.org>
To: gentoo-commits@lists.gentoo.org
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Message-ID: <1457293408.c5a275736294026002e61d4d3582c1c8e3e8ca51.jlec@gentoo>
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/jellyfish/
X-VCS-Repository: proj/sci
X-VCS-Files: sci-biology/jellyfish/jellyfish-1.1.11.ebuild sci-biology/jellyfish/jellyfish-2.1.3.ebuild sci-biology/jellyfish/jellyfish-2.1.4.ebuild
X-VCS-Directories: sci-biology/jellyfish/
X-VCS-Committer: jlec
X-VCS-Committer-Name: Justin Lecher
X-VCS-Revision: c5a275736294026002e61d4d3582c1c8e3e8ca51
X-VCS-Branch: master
Date: Sun, 6 Mar 2016 19:44:55 +0000 (UTC)
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commit: c5a275736294026002e61d4d3582c1c8e3e8ca51
Author: mschubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Sat Jan 23 19:31:54 2016 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Mar 6 19:43:28 2016 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c5a27573
sci-biology/jellyfish: bump EAPI=6 and QA
* respect ${EPREFIX}, fix pkg-config paths
* add missing die
sci-biology/jellyfish/jellyfish-1.1.11.ebuild | 12 ++++++------
sci-biology/jellyfish/jellyfish-2.1.3.ebuild | 13 ++++++-------
sci-biology/jellyfish/jellyfish-2.1.4.ebuild | 13 ++++++-------
3 files changed, 18 insertions(+), 20 deletions(-)
diff --git a/sci-biology/jellyfish/jellyfish-1.1.11.ebuild b/sci-biology/jellyfish/jellyfish-1.1.11.ebuild
index 9d36444..acb7729 100644
--- a/sci-biology/jellyfish/jellyfish-1.1.11.ebuild
+++ b/sci-biology/jellyfish/jellyfish-1.1.11.ebuild
@@ -1,8 +1,8 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
-EAPI=5
+EAPI=6
DESCRIPTION="k-mer counter within reads for assemblies"
HOMEPAGE="http://www.cbcb.umd.edu/software/jellyfish"
@@ -24,8 +24,8 @@ DEPEND="${RDEPEND}
src_install(){
default
- sed -e "s#jellyfish-${PV}#jellyfish#" -i "${D}"/usr/lib64/pkgconfig/jellyfish-1.1.pc || die
- mkdir -p "${D}/usr/include/${PN}" || die
- mv "${D}"/usr/include/"${P}"/"${PN}"/* "${D}/usr/include/${PN}/" || die
- rm -rf "${D}/usr/include/${P}"
+ sed -e "s#jellyfish-${PV}#jellyfish#" -i "${ED}/usr/$(get_libdir)"/pkgconfig/jellyfish-1.1.pc || die
+ mkdir -p "${ED}/usr/include/${PN}" || die
+ mv "${ED}"/usr/include/"${P}"/"${PN}"/* "${ED}/usr/include/${PN}/" || die
+ rm -r "${ED}/usr/include/${P}" || die
}
diff --git a/sci-biology/jellyfish/jellyfish-2.1.3.ebuild b/sci-biology/jellyfish/jellyfish-2.1.3.ebuild
index 226b260..d38d7bb 100644
--- a/sci-biology/jellyfish/jellyfish-2.1.3.ebuild
+++ b/sci-biology/jellyfish/jellyfish-2.1.3.ebuild
@@ -1,8 +1,8 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
-EAPI=5
+EAPI=6
DESCRIPTION="k-mer counter within reads for assemblies"
HOMEPAGE="http://www.genome.umd.edu/jellyfish.html"
@@ -22,9 +22,8 @@ DEPEND="${RDEPEND}
src_install(){
default
- # beware the filename say 2.0 instead of 2.1. does it matter?
- sed -e "s#jellyfish-${PV}#jellyfish#" -i "${D}"/usr/lib64/pkgconfig/jellyfish-2.0.pc || die
- mkdir -p "${D}/usr/include/${PN}" || die
- mv "${D}"/usr/include/"${P}"/"${PN}"/* "${D}/usr/include/${PN}/" || die
- rm -rf "${D}/usr/include/${P}"
+ sed -e "s#jellyfish-${PV}#jellyfish#" -i "${ED}/usr/$(get_libdir)"/pkgconfig/jellyfish-2.0.pc || die
+ mkdir -p "${ED}/usr/include/${PN}" || die
+ mv "${ED}"/usr/include/"${P}"/"${PN}"/* "${ED}/usr/include/${PN}/" || die
+ rm -r "${ED}/usr/include/${P}" || die
}
diff --git a/sci-biology/jellyfish/jellyfish-2.1.4.ebuild b/sci-biology/jellyfish/jellyfish-2.1.4.ebuild
index 226b260..d38d7bb 100644
--- a/sci-biology/jellyfish/jellyfish-2.1.4.ebuild
+++ b/sci-biology/jellyfish/jellyfish-2.1.4.ebuild
@@ -1,8 +1,8 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
-EAPI=5
+EAPI=6
DESCRIPTION="k-mer counter within reads for assemblies"
HOMEPAGE="http://www.genome.umd.edu/jellyfish.html"
@@ -22,9 +22,8 @@ DEPEND="${RDEPEND}
src_install(){
default
- # beware the filename say 2.0 instead of 2.1. does it matter?
- sed -e "s#jellyfish-${PV}#jellyfish#" -i "${D}"/usr/lib64/pkgconfig/jellyfish-2.0.pc || die
- mkdir -p "${D}/usr/include/${PN}" || die
- mv "${D}"/usr/include/"${P}"/"${PN}"/* "${D}/usr/include/${PN}/" || die
- rm -rf "${D}/usr/include/${P}"
+ sed -e "s#jellyfish-${PV}#jellyfish#" -i "${ED}/usr/$(get_libdir)"/pkgconfig/jellyfish-2.0.pc || die
+ mkdir -p "${ED}/usr/include/${PN}" || die
+ mv "${ED}"/usr/include/"${P}"/"${PN}"/* "${ED}/usr/include/${PN}/" || die
+ rm -r "${ED}/usr/include/${P}" || die
}