[gentoo-commits] repo/gentoo:master commit in: sci-biology/bfast/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bfast/

[Justin Lecher]

commit:     7820d699763ed59870d592a1ae2cc4e23b776fe2
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Dec 25 11:43:04 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Dec 25 11:44:51 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7820d699

sci-biology/bfast: Fix inlining

Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=569656

Package-Manager: portage-2.2.26
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/bfast/bfast-0.7.0a.ebuild | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/sci-biology/bfast/bfast-0.7.0a.ebuild b/sci-biology/bfast/bfast-0.7.0a.ebuild
index 9083343..b901ed5 100644
--- a/sci-biology/bfast/bfast-0.7.0a.ebuild
+++ b/sci-biology/bfast/bfast-0.7.0a.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
@@ -6,7 +6,7 @@ EAPI=5
 
 AUTOTOOLS_AUTORECONF=true
 
-inherit autotools-utils
+inherit autotools-utils flag-o-matic
 
 DESCRIPTION="Blat-like Fast Accurate Search Tool"
 HOMEPAGE="https://sourceforge.net/projects/bfast/"
@@ -36,5 +36,7 @@ src_prepare() {
 
 	use test && AUTOTOOLS_IN_SOURCE_BUILD=1
 
+	append-flags -fgnu89-inline
+
 	autotools-utils_src_prepare
 }

[gentoo-commits] repo/gentoo:master commit in: sci-biology/bfast/

[Arthur Zamarin]

commit:     19ec1063d356fdd24c4e8d23889da62d3e528ca5
Author:     Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
AuthorDate: Wed Apr  9 08:44:12 2025 +0000
Commit:     Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
CommitDate: Wed Apr  9 17:31:40 2025 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=19ec1063

sci-biology/bfast: drop 0.7.0a

Signed-off-by: Arthur Zamarin <arthurzam <AT> gentoo.org>

 sci-biology/bfast/bfast-0.7.0a.ebuild | 29 -----------------------------
 1 file changed, 29 deletions(-)

diff --git a/sci-biology/bfast/bfast-0.7.0a.ebuild b/sci-biology/bfast/bfast-0.7.0a.ebuild
deleted file mode 100644
index dd4036c6030e..000000000000
--- a/sci-biology/bfast/bfast-0.7.0a.ebuild
+++ /dev/null
@@ -1,29 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit autotools
-
-DESCRIPTION="Blat-like Fast Accurate Search Tool"
-HOMEPAGE="https://sourceforge.net/projects/bfast/"
-SRC_URI="https://downloads.sourceforge.net/${PN}/${P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="test"
-RESTRICT="test" # tests broken, upstream unresponsive
-
-RDEPEND="dev-perl/XML-Simple"
-
-PATCHES=(
-	"${FILESDIR}"/${P}-autotools.patch
-	"${FILESDIR}"/${P}-test-sourcing.patch
-	"${FILESDIR}"/${P}-C99-inline.patch
-)
-
-src_prepare() {
-	default
-	eautoreconf
-}