[gentoo-commits] proj/sci:master commit in: sci-biology/codonw/

["Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>]

commit:     a08742af9a713a34c87c6e97a33d129036099a8a
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Nov 15 18:52:39 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sun Nov 15 18:52:39 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=a08742af

sci-biology/codonw: add original Thesis of John Peden describing codonw package in more detail

Package-Manager: portage-2.2.18

 sci-biology/codonw/ChangeLog              | 5 +++++
 sci-biology/codonw/codonw-1.4.4-r2.ebuild | 5 +++--
 2 files changed, 8 insertions(+), 2 deletions(-)

diff --git a/sci-biology/codonw/ChangeLog b/sci-biology/codonw/ChangeLog
index ab9070f..4bcea2c 100644
--- a/sci-biology/codonw/ChangeLog
+++ b/sci-biology/codonw/ChangeLog
@@ -2,6 +2,11 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Id$
 
+  15 Nov 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  codonw-1.4.4-r2.ebuild:
+  sci-biology/codonw: add original Thesis of John Peden describing codonw
+  package in more detail
+
   08 Jun 2015; Justin Lecher <jlec@gentoo.org> metadata.xml:
   sci-biology/codonw: Updating remote-id in metadata.xml
 

diff --git a/sci-biology/codonw/codonw-1.4.4-r2.ebuild b/sci-biology/codonw/codonw-1.4.4-r2.ebuild
index 3c228bd..152d75e 100644
--- a/sci-biology/codonw/codonw-1.4.4-r2.ebuild
+++ b/sci-biology/codonw/codonw-1.4.4-r2.ebuild
@@ -10,7 +10,8 @@ MY_PV=$(replace_all_version_separators '_')
 
 DESCRIPTION="Multivariate statistical analysis of codon and amino acid usage"
 HOMEPAGE="http://codonw.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/CodonWSourceCode_${MY_PV}.tar.gz"
+SRC_URI="mirror://sourceforge/${PN}/CodonWSourceCode_${MY_PV}.tar.gz
+		http://codonw.sourceforge.net/JohnPedenThesisPressOpt_water.pdf"
 
 LICENSE="GPL-2"
 SLOT="0"
@@ -37,5 +38,5 @@ src_install() {
 	for i in rscu cu aau raau tidy reader cutab cutot transl bases base3s dinuc cai fop gc3s gc cbi enc; do
 		dosym codonw /usr/bin/${i}-${PN}
 	done
-	dodoc *.txt
+	dodoc *.txt "${DISTDIR}"/JohnPedenThesisPressOpt_water.pdf
 }