public inbox for gentoo-commits@lists.gentoo.org
 help / color / mirror / Atom feed
* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2015-09-20  3:04 Matthias Maier
  0 siblings, 0 replies; 10+ messages in thread
From: Matthias Maier @ 2015-09-20  3:04 UTC (permalink / raw
  To: gentoo-commits

commit:     a49857b0651a056274c2aab7f887dc7829bb64e3
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 20 03:00:46 2015 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Sep 20 03:04:08 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a49857b0

sci-visualization/paraview: Fix compile for "development -python", bug #560670

Thanks to Dion Moult for tracking this down.

Gentoo-Bug: 560670

Package-Manager: portage-2.2.20.1

 .../files/paraview-4.3.1-fix-development-install.patch   | 16 ++++++++++++++++
 sci-visualization/paraview/paraview-4.3.1.ebuild         |  7 ++++---
 2 files changed, 20 insertions(+), 3 deletions(-)

diff --git a/sci-visualization/paraview/files/paraview-4.3.1-fix-development-install.patch b/sci-visualization/paraview/files/paraview-4.3.1-fix-development-install.patch
new file mode 100644
index 0000000..4bc5e54
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.3.1-fix-development-install.patch
@@ -0,0 +1,16 @@
+https://bugs.gentoo.org/show_bug.cgi?id=560670
+http://www.paraview.org/Bug/view.php?id=15655
+
+diff --git a/Qt/Components/CMakeLists.txt b/Qt/Components/CMakeLists.txt
+index c45b4bf..8616a90 100644
+--- a/Qt/Components/CMakeLists.txt
++++ b/Qt/Components/CMakeLists.txt
+@@ -650,7 +650,7 @@ vtk_module_library(${vtk-module}
+ #the pqSGExportStateWizard has subclasses that directly access
+ #the UI file, and currently we don't have a clean way to break this hard
+ #dependency, so for no we install this ui file.
+-if(PARAVIEW_INSTALL_DEVELOPMENT_FILES)
++if(PARAVIEW_INSTALL_DEVELOPMENT_FILES AND PARAVIEW_ENABLE_PYTHON)
+   install(FILES "${CMAKE_CURRENT_BINARY_DIR}/ui_pqExportStateWizard.h"
+           DESTINATION "${VTK_INSTALL_INCLUDE_DIR}")
+ endif()

diff --git a/sci-visualization/paraview/paraview-4.3.1.ebuild b/sci-visualization/paraview/paraview-4.3.1.ebuild
index 7d7b44f..c978762 100644
--- a/sci-visualization/paraview/paraview-4.3.1.ebuild
+++ b/sci-visualization/paraview/paraview-4.3.1.ebuild
@@ -90,12 +90,13 @@ pkg_setup() {
 src_prepare() {
 	# see patch headers for description
 	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.2.0-removesqlite.patch \
 		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
+		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
 		"${FILESDIR}"/${PN}-4.2.0-protobuf.patch \
+		"${FILESDIR}"/${PN}-4.2.0-removesqlite.patch \
+		"${FILESDIR}"/${PN}-4.2.0-vtk-freetype.patch \
 		"${FILESDIR}"/${P}-protobuf-2.6.patch \
-		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
-		"${FILESDIR}"/${PN}-4.2.0-vtk-freetype.patch
+		"${FILESDIR}"/${P}-fix-development-install.patch
 
 	# lib64 fixes
 	sed -i \


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2015-09-20  3:04 Matthias Maier
  0 siblings, 0 replies; 10+ messages in thread
From: Matthias Maier @ 2015-09-20  3:04 UTC (permalink / raw
  To: gentoo-commits

commit:     1b6729b01b86fe46347b9547efd931fe1e999192
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 20 02:53:17 2015 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Sep 20 03:04:08 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1b6729b0

sci-visualization/paraview: Fix compilation with protobuf-2.6 (bug #537988)

Gentoo-Bug: 537988

Package-Manager: portage-2.2.20.1

 ...buf-2.patch => paraview-4.3.1-protobuf-2.6.patch} | 20 ++++++++++++++++++--
 sci-visualization/paraview/paraview-4.2.0-r1.ebuild  |  1 -
 sci-visualization/paraview/paraview-4.3.1.ebuild     |  4 ++--
 3 files changed, 20 insertions(+), 5 deletions(-)

diff --git a/sci-visualization/paraview/files/paraview-4.2.0-protobuf-2.patch b/sci-visualization/paraview/files/paraview-4.3.1-protobuf-2.6.patch
similarity index 84%
rename from sci-visualization/paraview/files/paraview-4.2.0-protobuf-2.patch
rename to sci-visualization/paraview/files/paraview-4.3.1-protobuf-2.6.patch
index f1ea7b5..5a7871f 100644
--- a/sci-visualization/paraview/files/paraview-4.2.0-protobuf-2.patch
+++ b/sci-visualization/paraview/files/paraview-4.3.1-protobuf-2.6.patch
@@ -1,5 +1,11 @@
-diff --git a/ParaViewCore/ServerImplementation/Core/vtkPVMessage.proto b/ParaViewCore/ServerImplementation/Core/vtkPVMessage.proto
-index 60e084c..aed5832 100644
+https://gitlab.kitware.com/ben.boeckel/paraview/commit/40a62e0bd20ceb73d7a545dab73e975fa07cddbb
+http://www.vtk.org/Bug/view.php?id=15442#c34997
+
+https://bugs.gentoo.org/show_bug.cgi?id=537988
+
+This updates the *.proto files to be compatible with version 2.6 and fixes
+a bug that prevented successful compilation with protobuf 2.6.
+
 --- a/ParaViewCore/ServerImplementation/Core/vtkPVMessage.proto
 +++ b/ParaViewCore/ServerImplementation/Core/vtkPVMessage.proto
 @@ -21,7 +21,7 @@ message Variant {
@@ -159,3 +165,13 @@ index 60e084c..aed5832 100644
    }
  }
  
+--- a/ParaViewCore/ServerManager/Rendering/vtkSMCameraLink.cxx
++++ b/ParaViewCore/ServerManager/Rendering/vtkSMCameraLink.cxx
+@@ -363,6 +363,6 @@ void vtkSMCameraLink::LoadState(const vtkSMMessage *msg, vtkSMProxyLocator *loca
+ void vtkSMCameraLink::UpdateState()
+ {
+   this->Superclass::UpdateState();
+-  this->State->GetExtension(LinkState::sync_interactive_renders,
++  this->State->SetExtension(LinkState::sync_interactive_renders,
+     this->GetSynchronizeInteractiveRenders());
+ }

diff --git a/sci-visualization/paraview/paraview-4.2.0-r1.ebuild b/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
index 62bbc1f..7777925 100644
--- a/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
+++ b/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
@@ -92,7 +92,6 @@ src_prepare() {
 		"${FILESDIR}"/${P}-removesqlite.patch \
 		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
 		"${FILESDIR}"/${P}-protobuf.patch \
-		"${FILESDIR}"/${P}-protobuf-2.patch \
 		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
 		"${FILESDIR}"/${P}-vtk-freetype.patch
 

diff --git a/sci-visualization/paraview/paraview-4.3.1.ebuild b/sci-visualization/paraview/paraview-4.3.1.ebuild
index bba2091..7d7b44f 100644
--- a/sci-visualization/paraview/paraview-4.3.1.ebuild
+++ b/sci-visualization/paraview/paraview-4.3.1.ebuild
@@ -29,7 +29,7 @@ RDEPEND="
 	dev-libs/expat
 	>=dev-libs/jsoncpp-0.10.1
 	dev-libs/libxml2:2
-	<dev-libs/protobuf-2.6
+	dev-libs/protobuf
 	media-libs/freetype
 	media-libs/libpng:0
 	media-libs/libtheora
@@ -93,7 +93,7 @@ src_prepare() {
 		"${FILESDIR}"/${PN}-4.2.0-removesqlite.patch \
 		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
 		"${FILESDIR}"/${PN}-4.2.0-protobuf.patch \
-		"${FILESDIR}"/${PN}-4.2.0-protobuf-2.patch \
+		"${FILESDIR}"/${P}-protobuf-2.6.patch \
 		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
 		"${FILESDIR}"/${PN}-4.2.0-vtk-freetype.patch
 


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2016-07-09 20:04 Matthias Maier
  0 siblings, 0 replies; 10+ messages in thread
From: Matthias Maier @ 2016-07-09 20:04 UTC (permalink / raw
  To: gentoo-commits

commit:     90bf5122ad89011806338beb9817d5f3ed2574e8
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sat Jul  9 20:02:20 2016 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sat Jul  9 20:03:53 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=90bf5122

sci-visualization/paraview: reinstantiate 4.1.0 to resolve openfoam dep

Package-Manager: portage-2.2.28

 sci-visualization/paraview/Manifest                |   1 +
 .../paraview/files/paraview-4.0.1-Protobuf.patch   |  72 +++
 .../files/paraview-4.0.1-removesqlite.patch        | 517 +++++++++++++++++++++
 .../files/paraview-4.0.1-vtk-cg-path.patch         |  36 ++
 .../files/paraview-4.1.0-glxext-legacy.patch       |   9 +
 .../files/paraview-4.1.0-no-fatal-warnings.patch   |  19 +
 .../files/paraview-4.1.0-vtk-freetype.patch        |  22 +
 .../paraview/paraview-4.1.0-r2.ebuild              | 302 ++++++++++++
 8 files changed, 978 insertions(+)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 8699b23..1e11e68 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,2 +1,3 @@
+DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
 DIST ParaView-v4.4.0-source.tar.gz 58397252 SHA256 c2dc334a89df24ce5233b81b74740fc9f10bc181cd604109fd13f6ad2381fc73 SHA512 092dee4ca75b9f4e3b4a53c85ebc89f406a91f6dd9ac9a3deb65de776189c2582d15c2b1f8f0393ff4d7a438333f8801de22d2cf916b314d8b85d93cc5f4671e WHIRLPOOL 722be36c45563066a2e91e7ea3e382d6928056a38c01920089f6e16a721259e1e8f99b26c982f136f9cfac8f1cb1d9f54ee0267cea79360ace4c00e81a47e61b
 DIST ParaView-v5.1.0.tar.gz 51613148 SHA256 1ce345e9c5533c2854ad7e89cf4f90992bafee23707ae9f85d12b38405169f2a SHA512 c9af27d8be03783c7353735718a41ee03732db0f2e4f6e2db5e1e72d3df01801bb77294713c2b96eaf17e75d1fd6a30e340b3c33f496f7e705d07badfa196e69 WHIRLPOOL 08cd669f02fd54b7fc4054f23f04a3dc274e4ba8ebdf54fb14caaa95bc0c9fb2e2e5551a9e74d88062f2230eb511b7e18d6cb75bb43f4291e19dbaa2ed53cd1f

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
new file mode 100644
index 0000000..6a09a1a
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
@@ -0,0 +1,72 @@
+http://paraview.org/Bug/view.php?id=13656
+
+diff -up ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
+--- ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
++++ ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt	2012-11-13 15:17:53.980027098 -0700
+@@ -81,16 +81,24 @@
+ #------------------------------------------------------------------------------
+ # Generate the protbuf message file.
+ #------------------------------------------------------------------------------
+-get_target_property(PROTOC_LOCATION protoc_compiler LOCATION)
++if (VTK_USE_SYSTEM_PROTOBUF)
++	set (_PROTOC_COMPILER protoc)
++	set (_PROTOC_DEPEND "")
++else()
++	set (_PROTOC_COMPILER protoc_compiler)
++	set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
++endif()
++
++get_target_property(PROTOC_LOCATION ${_PROTOC_COMPILER} LOCATION)
+ add_custom_command(
+     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
+            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
+     
+-    COMMAND protoc_compiler
++    COMMAND ${_PROTOC_COMPILER}
+            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
+            --proto_path "@CMAKE_CURRENT_SOURCE_DIR@"
+            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
+-    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
++    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
+     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ )
+ 
+@@ -109,5 +117,9 @@
+ vtk_module_library(vtkPVServerImplementationCore
+   ${Module_SRCS})
+ 
++if (VTK_USE_SYSTEM_PROTOBUF)
++	target_link_libraries(vtkPVServerImplementationCore ${CMAKE_THREAD_LIBS_INIT})
++endif()
++
+ add_dependencies(vtkPVServerImplementationCore
+   protobuf_code_generation)
+diff -up ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf ParaView/ThirdParty/protobuf/CMakeLists.txt
+--- ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
++++ ParaView/ThirdParty/protobuf/CMakeLists.txt	2012-11-13 15:09:31.526673020 -0700
+@@ -34,7 +34,7 @@
+ set (PROTOBUF_INSTALL_LIB_DIR ${VTK_INSTALL_LIBRARY_DIR})
+ set (PROTOBUF_INSTALL_EXPORT_NAME ${VTK_INSTALL_EXPORT_NAME})
+ 
+-vtk_module_third_party(protobuf
++vtk_module_third_party(Protobuf
+   INCLUDE_DIRS ${CMAKE_CURRENT_SOURCE_DIR}/vtkprotobuf/src
+   LIBRARIES protobuf
+ )
+@@ -42,10 +42,12 @@
+ # protobuf exports it's build-dir targets to a custom file
+ # (PROTOBUF_EXPORTS.cmake). We don't care much about that. We export
+ # build-dir targets ourselves.
+-vtk_target_export(protobuf)
+-vtk_target_export(protobuf-lite)
+-if (NOT CMAKE_CROSSCOMPILING)
+-  vtk_compile_tools_target_export(protoc_compiler)
++if (NOT VTK_USE_SYSTEM_PROTOBUF)
++  vtk_target_export(protobuf)
++  vtk_target_export(protobuf-lite)
++  if (NOT CMAKE_CROSSCOMPILING)
++    vtk_compile_tools_target_export(protoc_compiler)
++  endif()
+ endif()
+ 
+ # All these exports don't add any install rules. However we make protobuf itself

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
new file mode 100644
index 0000000..be495b4
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
@@ -0,0 +1,517 @@
+Description: Import patch from VTK to remove sqlite
+Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
+Last-Update: Mon Feb 11 14:58:03 UTC 2013
+
+remove the internal copy of sqlite (vtksqlite)
+http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
+
+--- VTK/IO/SQL/vtkSQLiteDatabase.cxx
++++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
+@@ -29,7 +29,7 @@
+ #include <vtksys/ios/fstream>
+ #include <vtksys/ios/sstream>
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ vtkStandardNewMacro(vtkSQLiteDatabase);
+ 
+@@ -307,15 +307,15 @@
+       }
+     }
+ 
+-  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
++  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
+ 
+-  if (result != VTK_SQLITE_OK)
++  if (result != SQLITE_OK)
+     {
+     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
+                   << result << " and message is "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+ 
+-    vtk_sqlite3_close(this->SQLiteInstance);
++    sqlite3_close(this->SQLiteInstance);
+     return false;
+     }
+   else
+@@ -334,8 +334,8 @@
+     }
+   else
+     {
+-    int result = vtk_sqlite3_close(this->SQLiteInstance);
+-    if (result != VTK_SQLITE_OK)
++    int result = sqlite3_close(this->SQLiteInstance);
++    if (result != SQLITE_OK)
+       {
+       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
+       }
+@@ -374,7 +374,7 @@
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetTables(): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return this->Tables;
+     }
+@@ -403,7 +403,7 @@
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return NULL;
+     }
+@@ -467,10 +467,10 @@
+ // ----------------------------------------------------------------------
+ bool vtkSQLiteDatabase::HasError()
+ {
+-  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
++  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
+ }
+ 
+ const char* vtkSQLiteDatabase::GetLastErrorText()
+ {
+-  return vtk_sqlite3_errmsg(this->SQLiteInstance);
++  return sqlite3_errmsg(this->SQLiteInstance);
+ }
+--- VTK/IO/SQL/vtkSQLiteQuery.cxx
++++ VTK/IO/SQL/vtkSQLiteQuery.cxx
+@@ -25,7 +25,7 @@
+ #include "vtkVariant.h"
+ #include "vtkVariantArray.h"
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ #include <assert.h>
+ 
+@@ -43,7 +43,7 @@
+ {
+   this->Statement = NULL;
+   this->InitialFetch = true;
+-  this->InitialFetchResult=VTK_SQLITE_DONE;
++  this->InitialFetchResult=SQLITE_DONE;
+   this->LastErrorText = NULL;
+   this->TransactionInProgress = false;
+ }
+@@ -61,7 +61,7 @@
+     {
+     if (this->Database != NULL)
+       {
+-      vtk_sqlite3_finalize(this->Statement);
++      sqlite3_finalize(this->Statement);
+       this->Statement = NULL;
+       }
+     }
+@@ -131,8 +131,8 @@
+   if (this->Statement)
+     {
+     vtkDebugMacro(<<"Finalizing old statement");
+-    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
+-    if (finalizeStatus != VTK_SQLITE_OK)
++    int finalizeStatus = sqlite3_finalize(this->Statement);
++    if (finalizeStatus != SQLITE_OK)
+       {
+       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
+                       << finalizeStatus);
+@@ -151,19 +151,19 @@
+       return false;
+       }
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+     const char *unused_statement;
+ 
+-    int prepareStatus = vtk_sqlite3_prepare_v2(db,
++    int prepareStatus = sqlite3_prepare_v2(db,
+                                                this->Query,
+                                                static_cast<int>(strlen(this->Query)),
+                                                &this->Statement,
+                                                &unused_statement);
+ 
+-    if (prepareStatus != VTK_SQLITE_OK)
++    if (prepareStatus != SQLITE_OK)
+       {
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
++      this->SetLastErrorText(sqlite3_errmsg(db));
++      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
+                     << this->GetLastErrorText()
+                     << " on statement: '"
+                     << this->Query << "'");
+@@ -194,31 +194,31 @@
+     }
+   else
+     {
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   vtkDebugMacro(<<"Execute(): Query ready to execute.");
+ 
+   this->InitialFetch = true;
+-  int result = vtk_sqlite3_step(this->Statement);
++  int result = sqlite3_step(this->Statement);
+   this->InitialFetchResult = result;
+ 
+-  if (result == VTK_SQLITE_DONE)
++  if (result == SQLITE_DONE)
+     {
+     this->SetLastErrorText(NULL);
+     this->Active = true;
+     return true;
+     }
+-  else if (result != VTK_SQLITE_ROW)
++  else if (result != SQLITE_ROW)
+     {
+     vtkSQLiteDatabase *dbContainer =
+       vtkSQLiteDatabase::SafeDownCast(this->Database);
+     assert(dbContainer != NULL);
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+ 
+-    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
++    this->SetLastErrorText(sqlite3_errmsg(db));
++    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
+                   << this->GetLastErrorText());
+     this->Active = false;
+     return false;
+@@ -239,7 +239,7 @@
+     }
+   else
+     {
+-    return vtk_sqlite3_column_count(this->Statement);
++    return sqlite3_column_count(this->Statement);
+     }
+ }
+ 
+@@ -259,7 +259,7 @@
+     }
+   else
+     {
+-    return vtk_sqlite3_column_name(this->Statement, column);
++    return sqlite3_column_name(this->Statement, column);
+     }
+ }
+ 
+@@ -279,22 +279,22 @@
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
++      case SQLITE_INTEGER:
+         return VTK_INT;
+-      case VTK_SQLITE_FLOAT:
++      case SQLITE_FLOAT:
+         return VTK_FLOAT;
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+         return VTK_STRING;
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+         return VTK_STRING; // until we have a BLOB type of our own
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+         return VTK_VOID; // ??? what makes sense here?
+       default:
+       {
+       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
+-                    << vtk_sqlite3_column_type(this->Statement, column)
++                    << sqlite3_column_type(this->Statement, column)
+                     <<" from SQLite.");
+       return VTK_VOID;
+       }
+@@ -315,7 +315,7 @@
+     {
+     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
+     this->InitialFetch = false;
+-    if (this->InitialFetchResult == VTK_SQLITE_DONE)
++    if (this->InitialFetchResult == SQLITE_DONE)
+       {
+       return false;
+       }
+@@ -326,12 +326,12 @@
+     }
+   else
+     {
+-    int result = vtk_sqlite3_step(this->Statement);
+-    if (result == VTK_SQLITE_DONE)
++    int result = sqlite3_step(this->Statement);
++    if (result == SQLITE_DONE)
+       {
+       return false;
+       }
+-    else if (result == VTK_SQLITE_ROW)
++    else if (result == SQLITE_ROW)
+       {
+       return true;
+       }
+@@ -339,8 +339,8 @@
+       {
+       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+       assert(dbContainer != NULL);
+-      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
++      sqlite3 *db = dbContainer->SQLiteInstance;
++      this->SetLastErrorText(sqlite3_errmsg(db));
+       vtkErrorMacro(<<"NextRow(): Database returned error code "
+                     << result << " with the following message: "
+                     << this->GetLastErrorText());
+@@ -366,33 +366,33 @@
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
+-        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
++      case SQLITE_INTEGER:
++        return vtkVariant(sqlite3_column_int(this->Statement, column));
+ 
+-      case VTK_SQLITE_FLOAT:
+-        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
++      case SQLITE_FLOAT:
++        return vtkVariant(sqlite3_column_double(this->Statement, column));
+ 
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+       {
+       vtksys_ios::ostringstream str;
+-      str << vtk_sqlite3_column_text(this->Statement, column);
++      str << sqlite3_column_text(this->Statement, column);
+       return vtkVariant(vtkStdString(str.str()));
+       }
+ 
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+       {
+       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
+       // byte count, we ensure that the string will store all of the BLOB's bytes,
+       // even if there are NULL values.
+ 
+       return vtkVariant(vtkStdString(
+-        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
+-        vtk_sqlite3_column_bytes(this->Statement, column)));
++        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
++        sqlite3_column_bytes(this->Statement, column)));
+       }
+ 
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+       default:
+         return vtkVariant();
+       }
+@@ -423,11 +423,11 @@
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+ 
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = true;
+     this->SetLastErrorText(NULL);
+@@ -451,7 +451,7 @@
+ {
+   if (this->Statement)
+     {
+-    vtk_sqlite3_finalize(this->Statement);
++    sqlite3_finalize(this->Statement);
+     this->Statement = NULL;
+     }
+ 
+@@ -463,11 +463,11 @@
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -499,11 +499,11 @@
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -647,11 +647,11 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
++  int status = sqlite3_bind_int(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_int returned error: " << status;
+@@ -676,11 +676,11 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
++  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_int64 returned error: " << status;
+@@ -705,12 +705,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
++  int status = sqlite3_bind_double(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_double returned error: " << status;
+@@ -734,12 +734,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
++  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_text returned error: " << status;
+@@ -763,17 +763,17 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   int status =
+-    vtk_sqlite3_bind_blob(this->Statement,
++    sqlite3_bind_blob(this->Statement,
+                           index+1,
+                           data,
+                           length,
+-                          VTK_SQLITE_TRANSIENT);
++                          SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_blob returned error: " << status;
+@@ -797,12 +797,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_clear_bindings(this->Statement);
++  int status = sqlite3_clear_bindings(this->Statement);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_clear_bindings returned error: " << status;
+--- VTK/IO/SQL/vtkSQLiteDatabase.h
++++ VTK/IO/SQL/vtkSQLiteDatabase.h
+@@ -49,7 +49,7 @@
+ class vtkSQLQuery;
+ class vtkSQLiteQuery;
+ class vtkStringArray;
+-struct vtk_sqlite3;
++struct sqlite3;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
+ {
+@@ -147,7 +147,7 @@
+   virtual bool ParseURL(const char* url);
+ 
+ private:
+-  vtk_sqlite3 *SQLiteInstance;
++  sqlite3 *SQLiteInstance;
+ 
+   // We want this to be private, a user of this class
+   // should not be setting this for any reason
+--- VTK/IO/SQL/vtkSQLiteQuery.h
++++ VTK/IO/SQL/vtkSQLiteQuery.h
+@@ -47,7 +47,7 @@
+ class vtkSQLiteDatabase;
+ class vtkVariant;
+ class vtkVariantArray;
+-struct vtk_sqlite3_stmt;
++struct sqlite3_stmt;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
+ {
+@@ -155,7 +155,7 @@
+   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
+   void operator=(const vtkSQLiteQuery &); // Not implemented.
+ 
+-  vtk_sqlite3_stmt *Statement;
++  sqlite3_stmt *Statement;
+   bool InitialFetch;
+   int InitialFetchResult;
+   char *LastErrorText;
+--- VTK/ThirdParty/sqlite/CMakeLists.txt
++++ VTK/ThirdParty/sqlite/CMakeLists.txt
+@@ -1,4 +1,4 @@
+-set(vtksqlite_THIRD_PARTY 1)
+-set(vtksqlite_LIBRARIES vtksqlite)
++#set(vtksqlite_THIRD_PARTY 1)
++set(vtksqlite_LIBRARIES sqlite3)
+ vtk_module_export_info()
+-add_subdirectory(vtksqlite)
++#add_subdirectory(vtksqlite)

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
new file mode 100644
index 0000000..58ddde9
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
@@ -0,0 +1,36 @@
+--- ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
++++ ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
+@@ -82,6 +82,7 @@
+     FIND_PROGRAM( CG_COMPILER cgc
+       /usr/bin
+       /usr/local/bin
++      /opt/nvidia-cg-toolkit/bin
+       DOC "The Cg Compiler"
+       )
+     GET_FILENAME_COMPONENT(CG_COMPILER_DIR "${CG_COMPILER}" PATH)
+@@ -89,6 +90,7 @@
+     FIND_PATH( CG_INCLUDE_PATH Cg/cg.h
+       /usr/include
+       /usr/local/include
++      /opt/nvidia-cg-toolkit/include
+       ${CG_COMPILER_SUPER_DIR}/include
+       DOC "The directory where Cg/cg.h resides"
+       )
+@@ -98,6 +100,8 @@
+       /usr/lib
+       /usr/local/lib64
+       /usr/local/lib
++      /opt/nvidia-cg-toolkit/lib64
++      /opt/nvidia-cg-toolkit/lib
+       ${CG_COMPILER_SUPER_DIR}/lib64
+       ${CG_COMPILER_SUPER_DIR}/lib
+       DOC "The Cg runtime library"
+@@ -108,6 +112,8 @@
+       /usr/lib
+       /usr/local/lib64
+       /usr/local/lib
++      /opt/nvidia-cg-toolkit/lib64
++      /opt/nvidia-cg-toolkit/lib
+       ${CG_COMPILER_SUPER_DIR}/lib64
+       ${CG_COMPILER_SUPER_DIR}/lib
+       DOC "The Cg runtime library"

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
new file mode 100644
index 0000000..65a5b20
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
@@ -0,0 +1,9 @@
+--- a/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx_orig	2014-01-11 15:02:10.000000000 +0100
++++ b/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx	2014-11-11 13:12:25.000000000 +0100
+@@ -28,5 +28,5 @@
+ // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
+ // the system
+-//#define GLX_GLXEXT_LEGACY
++#define GLX_GLXEXT_LEGACY
+ #include "GL/glx.h"
+ 

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch b/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
new file mode 100644
index 0000000..531be2f
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
@@ -0,0 +1,19 @@
+diff --git a/VTK/CMake/vtkCompilerExtras.cmake b/VTK/CMake/vtkCompilerExtras.cmake
+index 05b2db9..48d9395 100644
+--- a/VTK/CMake/vtkCompilerExtras.cmake
++++ b/VTK/CMake/vtkCompilerExtras.cmake
+@@ -15,11 +15,11 @@ if(CMAKE_COMPILER_IS_GNUCXX)
+   # If we are compiling on Linux then set some extra linker flags too
+   if(CMAKE_SYSTEM_NAME MATCHES Linux)
+     set(CMAKE_SHARED_LINKER_FLAGS
+-      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
++      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
+     set(CMAKE_MODULE_LINKER_FLAGS
+-      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
++      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
+     set (CMAKE_EXE_LINKER_FLAGS
+-      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
++      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
+   endif()
+ 
+   # Now check if we can use visibility to selectively export symbols

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
new file mode 100644
index 0000000..b7d3e40
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
@@ -0,0 +1,22 @@
+--- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
++++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
+@@ -1185,7 +1185,7 @@
+     if (bitmap)
+       {
+       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
+-      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
++      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
+                                   metaData.descent);
+       }
+     ++heightString;
+@@ -1952,8 +1952,8 @@
+     if (bitmap)
+       {
+       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
+-      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
+-      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
++      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
++      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
+       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
+       }
+     else

diff --git a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
new file mode 100644
index 0000000..5745716
--- /dev/null
+++ b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
@@ -0,0 +1,302 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils multilib versionator python-single-r1 cmake-utils
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}-source"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org"
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+
+RDEPEND="
+	dev-libs/expat
+	dev-libs/jsoncpp
+	dev-libs/libxml2:2
+	<dev-libs/protobuf-2.6
+	media-libs/freetype
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/hdf5[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sys-libs/zlib
+	virtual/jpeg:0
+	virtual/opengl
+	>=x11-libs/gl2ps-1.3.8
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt4
+			dev-qt/qtgui:4
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( virtual/mysql )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/twisted-core[${PYTHON_USEDEP}]
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
+		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt4? (
+		dev-qt/designer:4
+		dev-qt/qtgui:4
+		dev-qt/qtopengl:4
+		dev-qt/qthelp:4[compat]
+		dev-qt/qtsql:4
+		dev-qt/qtwebkit:4
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	doc? ( app-doc/doxygen )"
+
+S=${WORKDIR}/${MY_P%-source}
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+	# see patch headers for description
+	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
+		"${FILESDIR}"/${PN}-4.0.1-removesqlite.patch \
+		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
+		"${FILESDIR}"/${PN}-4.0.1-vtk-cg-path.patch \
+		"${FILESDIR}"/${PN}-4.0.1-Protobuf.patch \
+		"${FILESDIR}"/${P}-glxext-legacy.patch \
+		"${FILESDIR}"/${P}-no-fatal-warnings.patch \
+		"${FILESDIR}"/${P}-vtk-freetype.patch
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
+	sed -i \
+		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		CMakeLists.txt \
+		Plugins/SciberQuestToolKit/CMakeLists.txt \
+		ParaViewConfig.cmake.in \
+		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
+		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
+		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
+		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
+		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
+
+	# no proper switch
+	use nvcontrol || {
+		sed -i \
+			-e '/VTK_USE_NVCONTROL/s#1#0#' \
+			VTK/Rendering/OpenGL/CMakeLists.txt || die
+	}
+}
+
+src_configure() {
+	local mysql_lib mysql_includedir
+
+	if use mysql ; then
+		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
+			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
+			mysql_includedir="/usr/include/mysql"
+		else
+			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
+			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
+		fi
+	fi
+
+	# TODO: use system jsoncpp
+	# VTK_USE_SYSTEM_QTTESTING
+	# PARAVIEW_USE_SYSTEM_AUTOBAHN
+	local mycmakeargs=(
+		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+		-DBUILD_SHARED_LIBS=ON
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=ON
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_OGGTHEORA=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF
+		-DVTK_USE_SYSTEM_ZLIB=ON
+		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
+		-DVTK_USE_SYSTEM_ZOPE=ON
+		-DVTK_USE_SYSTEM_TWISTED=ON
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+		-DCMAKE_COLOR_MAKEFILE=TRUE
+		-DVTK_USE_OFFSCREEN=TRUE
+		-DCMAKE_USE_PTHREADS=ON
+		-DVTK_USE_FFMPEG_ENCODER=OFF
+		-DPROTOC_LOCATION=$(type -P protoc)
+		-DVTK_Group_StandAlone=ON
+		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
+		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
+		# force this module due to incorrect build system deps
+		# wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+		)
+
+	# TODO: XDMF_USE_MYSQL?
+	# VTK_WRAP_JAVA
+	mycmakeargs+=(
+		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
+		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
+		$(cmake-utils_use qt4 Module_vtkRenderingQt)
+		$(cmake-utils_use qt4 Module_vtkViewsQt)
+		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
+		$(cmake-utils_use qt4 VTK_Group_Qt)
+		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
+		$(cmake-utils_use boost Module_vtkInfovisBoost)
+		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
+		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
+		$(cmake-utils_use mpi VTK_Group_MPI)
+		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
+		$(cmake-utils_use mpi XDMF_BUILD_MPI)
+		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
+		$(cmake-utils_use python VTK_Group_ParaViewPython)
+		$(cmake-utils_use python XDMF_WRAP_PYTHON)
+		$(cmake-utils_use python Module_vtkPython)
+		$(cmake-utils_use python Module_pqPython)
+		$(cmake-utils_use python Module_vtkWrappingPythonCore)
+		$(cmake-utils_use python Module_vtkPVPythonSupport)
+		$(cmake-utils_use python Module_AutobahnPython)
+		$(cmake-utils_use python Module_Twisted)
+		$(cmake-utils_use python Module_ZopeInterface)
+		$(cmake-utils_use python Module_vtkmpi4py)
+		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
+		$(cmake-utils_use doc BUILD_DOCUMENTATION)
+		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
+		$(cmake-utils_use examples BUILD_EXAMPLES)
+		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
+		$(cmake-utils_use mysql Module_vtkIOMySQL)
+		$(cmake-utils_use sqlite Module_vtksqlite)
+		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
+		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
+		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
+		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
+		$(cmake-utils_use tk VTK_Group_Tk)
+		$(cmake-utils_use tk VTK_USE_TK)
+		$(cmake-utils_use tk Module_vtkRenderingTk)
+		$(cmake-utils_use tcl Module_vtkTclTk)
+		$(cmake-utils_use tcl Module_vtkWrappingTcl)
+		$(cmake-utils_use test BUILD_TESTING)
+		)
+
+	if use qt4 ; then
+		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
+		if use python ; then
+			# paraview cannot guess sip directory properly
+			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
+		fi
+	fi
+
+	# TODO: MantaView VaporPlugin VRPlugin
+	mycmakeargs+=(
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
+		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
+		# these are always needed for plugins
+		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
+		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
+		)
+
+	cmake-utils_src_configure
+}
+
+src_compile() {
+	cmake-utils_src_compile
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# set up the environment
+	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
+
+	newicon "${S}"/Applications/ParaView/pvIcon.png paraview.png
+	make_desktop_entry paraview "Paraview" paraview
+
+	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+pkg_postinst() {
+	# with Qt4.5 there seem to be issues reading data files
+	# under certain locales. Setting LC_ALL=C should fix these.
+	elog ""
+	elog "If you experience data corruption during parsing of"
+	elog "data files with paraview please try setting your"
+	elog "locale to LC_ALL=C."
+	elog "If you plan to use paraview component from an existing shell"
+	elog "you should run env-update and . /etc/profile first"
+	elog ""
+	elog "paraview no longer exports bundled python modules in PYTHONPATH"
+	elog "globally due to clashes of bundled packages with system-wide"
+	elog "site-packages. If you want to use paraview's python modules"
+	elog "export"
+	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
+	elog "as needed."
+}


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2016-07-11 10:37 Matthias Maier
  0 siblings, 0 replies; 10+ messages in thread
From: Matthias Maier @ 2016-07-11 10:37 UTC (permalink / raw
  To: gentoo-commits

commit:     54d87e88e7adda88600515f73c46f4a5e15862a9
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Mon Jul 11 10:02:11 2016 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Mon Jul 11 10:36:42 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=54d87e88

sci-visualization/paraview: add DEPEND on >=cmake-3.3, bug #588516

 * Require >=dev-util/cmake-3.3
 * Apply upstream patch to lower the version requirement for cmake to 3.3

Thanks to Markus Kaindl.

Package-Manager: portage-2.2.28

 .../files/paraview-5.1.0-only-require-cmake-3.3.patch       | 13 +++++++++++++
 sci-visualization/paraview/paraview-5.1.0.ebuild            |  4 +++-
 2 files changed, 16 insertions(+), 1 deletion(-)

diff --git a/sci-visualization/paraview/files/paraview-5.1.0-only-require-cmake-3.3.patch b/sci-visualization/paraview/files/paraview-5.1.0-only-require-cmake-3.3.patch
new file mode 100644
index 0000000..103c28a
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.1.0-only-require-cmake-3.3.patch
@@ -0,0 +1,13 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index d476bb2..bc814f9 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -28,7 +28,7 @@
+ #  SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #
+ #==========================================================================
+-cmake_minimum_required(VERSION 3.5)
++cmake_minimum_required(VERSION 3.3)
+ 
+ project(ParaView)
+ 

diff --git a/sci-visualization/paraview/paraview-5.1.0.ebuild b/sci-visualization/paraview/paraview-5.1.0.ebuild
index 695baea..055d1c3 100644
--- a/sci-visualization/paraview/paraview-5.1.0.ebuild
+++ b/sci-visualization/paraview/paraview-5.1.0.ebuild
@@ -77,6 +77,7 @@ RDEPEND="
 	tk? ( dev-lang/tk:0= )"
 DEPEND="${RDEPEND}
 	${PYTHON_DEPS}
+	>=dev-util/cmake-3.3.1
 	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
 	doc? ( app-doc/doxygen )"
 
@@ -91,7 +92,8 @@ src_prepare() {
 	# see patch headers for description
 	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
 		"${FILESDIR}"/${PN}-4.3.1-fix-development-install.patch \
-		"${FILESDIR}"/${PN}-4.4.0-removesqlite.patch
+		"${FILESDIR}"/${PN}-4.4.0-removesqlite.patch \
+		"${FILESDIR}"/${P}-only-require-cmake-3.3.patch
 
 	# lib64 fixes
 	sed -i \


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2016-09-22 12:59 Matthias Maier
  0 siblings, 0 replies; 10+ messages in thread
From: Matthias Maier @ 2016-09-22 12:59 UTC (permalink / raw
  To: gentoo-commits

commit:     fb0617ee1bb9c0f0de401d430fcf707dc04a0ee8
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Thu Sep 22 12:58:44 2016 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Thu Sep 22 12:59:22 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=fb0617ee

sci-visualization/paraview: put back version 4.1.0

Well, it would be nice if bug #561084 could have been resolved.

Package-Manager: portage-2.2.28

 sci-visualization/paraview/Manifest                |   1 +
 .../paraview/files/paraview-4.0.1-Protobuf.patch   |  72 +++
 .../files/paraview-4.0.1-removesqlite.patch        | 517 +++++++++++++++++++++
 .../files/paraview-4.0.1-vtk-cg-path.patch         |  36 ++
 .../files/paraview-4.1.0-glxext-legacy.patch       |   9 +
 .../files/paraview-4.1.0-vtk-freetype.patch        |  22 +
 .../paraview/paraview-4.1.0-r2.ebuild              | 302 ++++++++++++
 7 files changed, 959 insertions(+)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 7e51626..e5892bf 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1 +1,2 @@
+DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
 DIST ParaView-v5.1.2.tar.gz 51635420 SHA256 ff02b7307a256b7c6e8ad900dee5796297494df7f9a0804fe801eb2f66e6a187 SHA512 9204732ecbe5048c96536a2d63f37ec51f331416bab11c982797d07cd0233e1424193d1c8cac6dfe7e91696997f8aaf92c3a32d7b05674c0b176d93444672e40 WHIRLPOOL 1bbb95672279317304dde1f3123a51f3ca787f0f0b1a28ce09e53f0fbfdf685da89efeb2b13c0409982cbc5566e3984542eeeb519aa757bdd849186135c57a64

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
new file mode 100644
index 00000000..6a09a1a
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
@@ -0,0 +1,72 @@
+http://paraview.org/Bug/view.php?id=13656
+
+diff -up ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
+--- ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
++++ ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt	2012-11-13 15:17:53.980027098 -0700
+@@ -81,16 +81,24 @@
+ #------------------------------------------------------------------------------
+ # Generate the protbuf message file.
+ #------------------------------------------------------------------------------
+-get_target_property(PROTOC_LOCATION protoc_compiler LOCATION)
++if (VTK_USE_SYSTEM_PROTOBUF)
++	set (_PROTOC_COMPILER protoc)
++	set (_PROTOC_DEPEND "")
++else()
++	set (_PROTOC_COMPILER protoc_compiler)
++	set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
++endif()
++
++get_target_property(PROTOC_LOCATION ${_PROTOC_COMPILER} LOCATION)
+ add_custom_command(
+     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
+            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
+     
+-    COMMAND protoc_compiler
++    COMMAND ${_PROTOC_COMPILER}
+            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
+            --proto_path "@CMAKE_CURRENT_SOURCE_DIR@"
+            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
+-    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
++    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
+     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ )
+ 
+@@ -109,5 +117,9 @@
+ vtk_module_library(vtkPVServerImplementationCore
+   ${Module_SRCS})
+ 
++if (VTK_USE_SYSTEM_PROTOBUF)
++	target_link_libraries(vtkPVServerImplementationCore ${CMAKE_THREAD_LIBS_INIT})
++endif()
++
+ add_dependencies(vtkPVServerImplementationCore
+   protobuf_code_generation)
+diff -up ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf ParaView/ThirdParty/protobuf/CMakeLists.txt
+--- ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
++++ ParaView/ThirdParty/protobuf/CMakeLists.txt	2012-11-13 15:09:31.526673020 -0700
+@@ -34,7 +34,7 @@
+ set (PROTOBUF_INSTALL_LIB_DIR ${VTK_INSTALL_LIBRARY_DIR})
+ set (PROTOBUF_INSTALL_EXPORT_NAME ${VTK_INSTALL_EXPORT_NAME})
+ 
+-vtk_module_third_party(protobuf
++vtk_module_third_party(Protobuf
+   INCLUDE_DIRS ${CMAKE_CURRENT_SOURCE_DIR}/vtkprotobuf/src
+   LIBRARIES protobuf
+ )
+@@ -42,10 +42,12 @@
+ # protobuf exports it's build-dir targets to a custom file
+ # (PROTOBUF_EXPORTS.cmake). We don't care much about that. We export
+ # build-dir targets ourselves.
+-vtk_target_export(protobuf)
+-vtk_target_export(protobuf-lite)
+-if (NOT CMAKE_CROSSCOMPILING)
+-  vtk_compile_tools_target_export(protoc_compiler)
++if (NOT VTK_USE_SYSTEM_PROTOBUF)
++  vtk_target_export(protobuf)
++  vtk_target_export(protobuf-lite)
++  if (NOT CMAKE_CROSSCOMPILING)
++    vtk_compile_tools_target_export(protoc_compiler)
++  endif()
+ endif()
+ 
+ # All these exports don't add any install rules. However we make protobuf itself

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
new file mode 100644
index 00000000..be495b4
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
@@ -0,0 +1,517 @@
+Description: Import patch from VTK to remove sqlite
+Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
+Last-Update: Mon Feb 11 14:58:03 UTC 2013
+
+remove the internal copy of sqlite (vtksqlite)
+http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
+
+--- VTK/IO/SQL/vtkSQLiteDatabase.cxx
++++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
+@@ -29,7 +29,7 @@
+ #include <vtksys/ios/fstream>
+ #include <vtksys/ios/sstream>
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ vtkStandardNewMacro(vtkSQLiteDatabase);
+ 
+@@ -307,15 +307,15 @@
+       }
+     }
+ 
+-  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
++  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
+ 
+-  if (result != VTK_SQLITE_OK)
++  if (result != SQLITE_OK)
+     {
+     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
+                   << result << " and message is "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+ 
+-    vtk_sqlite3_close(this->SQLiteInstance);
++    sqlite3_close(this->SQLiteInstance);
+     return false;
+     }
+   else
+@@ -334,8 +334,8 @@
+     }
+   else
+     {
+-    int result = vtk_sqlite3_close(this->SQLiteInstance);
+-    if (result != VTK_SQLITE_OK)
++    int result = sqlite3_close(this->SQLiteInstance);
++    if (result != SQLITE_OK)
+       {
+       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
+       }
+@@ -374,7 +374,7 @@
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetTables(): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return this->Tables;
+     }
+@@ -403,7 +403,7 @@
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return NULL;
+     }
+@@ -467,10 +467,10 @@
+ // ----------------------------------------------------------------------
+ bool vtkSQLiteDatabase::HasError()
+ {
+-  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
++  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
+ }
+ 
+ const char* vtkSQLiteDatabase::GetLastErrorText()
+ {
+-  return vtk_sqlite3_errmsg(this->SQLiteInstance);
++  return sqlite3_errmsg(this->SQLiteInstance);
+ }
+--- VTK/IO/SQL/vtkSQLiteQuery.cxx
++++ VTK/IO/SQL/vtkSQLiteQuery.cxx
+@@ -25,7 +25,7 @@
+ #include "vtkVariant.h"
+ #include "vtkVariantArray.h"
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ #include <assert.h>
+ 
+@@ -43,7 +43,7 @@
+ {
+   this->Statement = NULL;
+   this->InitialFetch = true;
+-  this->InitialFetchResult=VTK_SQLITE_DONE;
++  this->InitialFetchResult=SQLITE_DONE;
+   this->LastErrorText = NULL;
+   this->TransactionInProgress = false;
+ }
+@@ -61,7 +61,7 @@
+     {
+     if (this->Database != NULL)
+       {
+-      vtk_sqlite3_finalize(this->Statement);
++      sqlite3_finalize(this->Statement);
+       this->Statement = NULL;
+       }
+     }
+@@ -131,8 +131,8 @@
+   if (this->Statement)
+     {
+     vtkDebugMacro(<<"Finalizing old statement");
+-    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
+-    if (finalizeStatus != VTK_SQLITE_OK)
++    int finalizeStatus = sqlite3_finalize(this->Statement);
++    if (finalizeStatus != SQLITE_OK)
+       {
+       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
+                       << finalizeStatus);
+@@ -151,19 +151,19 @@
+       return false;
+       }
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+     const char *unused_statement;
+ 
+-    int prepareStatus = vtk_sqlite3_prepare_v2(db,
++    int prepareStatus = sqlite3_prepare_v2(db,
+                                                this->Query,
+                                                static_cast<int>(strlen(this->Query)),
+                                                &this->Statement,
+                                                &unused_statement);
+ 
+-    if (prepareStatus != VTK_SQLITE_OK)
++    if (prepareStatus != SQLITE_OK)
+       {
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
++      this->SetLastErrorText(sqlite3_errmsg(db));
++      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
+                     << this->GetLastErrorText()
+                     << " on statement: '"
+                     << this->Query << "'");
+@@ -194,31 +194,31 @@
+     }
+   else
+     {
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   vtkDebugMacro(<<"Execute(): Query ready to execute.");
+ 
+   this->InitialFetch = true;
+-  int result = vtk_sqlite3_step(this->Statement);
++  int result = sqlite3_step(this->Statement);
+   this->InitialFetchResult = result;
+ 
+-  if (result == VTK_SQLITE_DONE)
++  if (result == SQLITE_DONE)
+     {
+     this->SetLastErrorText(NULL);
+     this->Active = true;
+     return true;
+     }
+-  else if (result != VTK_SQLITE_ROW)
++  else if (result != SQLITE_ROW)
+     {
+     vtkSQLiteDatabase *dbContainer =
+       vtkSQLiteDatabase::SafeDownCast(this->Database);
+     assert(dbContainer != NULL);
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+ 
+-    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
++    this->SetLastErrorText(sqlite3_errmsg(db));
++    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
+                   << this->GetLastErrorText());
+     this->Active = false;
+     return false;
+@@ -239,7 +239,7 @@
+     }
+   else
+     {
+-    return vtk_sqlite3_column_count(this->Statement);
++    return sqlite3_column_count(this->Statement);
+     }
+ }
+ 
+@@ -259,7 +259,7 @@
+     }
+   else
+     {
+-    return vtk_sqlite3_column_name(this->Statement, column);
++    return sqlite3_column_name(this->Statement, column);
+     }
+ }
+ 
+@@ -279,22 +279,22 @@
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
++      case SQLITE_INTEGER:
+         return VTK_INT;
+-      case VTK_SQLITE_FLOAT:
++      case SQLITE_FLOAT:
+         return VTK_FLOAT;
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+         return VTK_STRING;
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+         return VTK_STRING; // until we have a BLOB type of our own
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+         return VTK_VOID; // ??? what makes sense here?
+       default:
+       {
+       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
+-                    << vtk_sqlite3_column_type(this->Statement, column)
++                    << sqlite3_column_type(this->Statement, column)
+                     <<" from SQLite.");
+       return VTK_VOID;
+       }
+@@ -315,7 +315,7 @@
+     {
+     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
+     this->InitialFetch = false;
+-    if (this->InitialFetchResult == VTK_SQLITE_DONE)
++    if (this->InitialFetchResult == SQLITE_DONE)
+       {
+       return false;
+       }
+@@ -326,12 +326,12 @@
+     }
+   else
+     {
+-    int result = vtk_sqlite3_step(this->Statement);
+-    if (result == VTK_SQLITE_DONE)
++    int result = sqlite3_step(this->Statement);
++    if (result == SQLITE_DONE)
+       {
+       return false;
+       }
+-    else if (result == VTK_SQLITE_ROW)
++    else if (result == SQLITE_ROW)
+       {
+       return true;
+       }
+@@ -339,8 +339,8 @@
+       {
+       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+       assert(dbContainer != NULL);
+-      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
++      sqlite3 *db = dbContainer->SQLiteInstance;
++      this->SetLastErrorText(sqlite3_errmsg(db));
+       vtkErrorMacro(<<"NextRow(): Database returned error code "
+                     << result << " with the following message: "
+                     << this->GetLastErrorText());
+@@ -366,33 +366,33 @@
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
+-        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
++      case SQLITE_INTEGER:
++        return vtkVariant(sqlite3_column_int(this->Statement, column));
+ 
+-      case VTK_SQLITE_FLOAT:
+-        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
++      case SQLITE_FLOAT:
++        return vtkVariant(sqlite3_column_double(this->Statement, column));
+ 
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+       {
+       vtksys_ios::ostringstream str;
+-      str << vtk_sqlite3_column_text(this->Statement, column);
++      str << sqlite3_column_text(this->Statement, column);
+       return vtkVariant(vtkStdString(str.str()));
+       }
+ 
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+       {
+       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
+       // byte count, we ensure that the string will store all of the BLOB's bytes,
+       // even if there are NULL values.
+ 
+       return vtkVariant(vtkStdString(
+-        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
+-        vtk_sqlite3_column_bytes(this->Statement, column)));
++        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
++        sqlite3_column_bytes(this->Statement, column)));
+       }
+ 
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+       default:
+         return vtkVariant();
+       }
+@@ -423,11 +423,11 @@
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+ 
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = true;
+     this->SetLastErrorText(NULL);
+@@ -451,7 +451,7 @@
+ {
+   if (this->Statement)
+     {
+-    vtk_sqlite3_finalize(this->Statement);
++    sqlite3_finalize(this->Statement);
+     this->Statement = NULL;
+     }
+ 
+@@ -463,11 +463,11 @@
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -499,11 +499,11 @@
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -647,11 +647,11 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
++  int status = sqlite3_bind_int(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_int returned error: " << status;
+@@ -676,11 +676,11 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
++  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_int64 returned error: " << status;
+@@ -705,12 +705,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
++  int status = sqlite3_bind_double(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_double returned error: " << status;
+@@ -734,12 +734,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
++  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_text returned error: " << status;
+@@ -763,17 +763,17 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   int status =
+-    vtk_sqlite3_bind_blob(this->Statement,
++    sqlite3_bind_blob(this->Statement,
+                           index+1,
+                           data,
+                           length,
+-                          VTK_SQLITE_TRANSIENT);
++                          SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_blob returned error: " << status;
+@@ -797,12 +797,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_clear_bindings(this->Statement);
++  int status = sqlite3_clear_bindings(this->Statement);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_clear_bindings returned error: " << status;
+--- VTK/IO/SQL/vtkSQLiteDatabase.h
++++ VTK/IO/SQL/vtkSQLiteDatabase.h
+@@ -49,7 +49,7 @@
+ class vtkSQLQuery;
+ class vtkSQLiteQuery;
+ class vtkStringArray;
+-struct vtk_sqlite3;
++struct sqlite3;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
+ {
+@@ -147,7 +147,7 @@
+   virtual bool ParseURL(const char* url);
+ 
+ private:
+-  vtk_sqlite3 *SQLiteInstance;
++  sqlite3 *SQLiteInstance;
+ 
+   // We want this to be private, a user of this class
+   // should not be setting this for any reason
+--- VTK/IO/SQL/vtkSQLiteQuery.h
++++ VTK/IO/SQL/vtkSQLiteQuery.h
+@@ -47,7 +47,7 @@
+ class vtkSQLiteDatabase;
+ class vtkVariant;
+ class vtkVariantArray;
+-struct vtk_sqlite3_stmt;
++struct sqlite3_stmt;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
+ {
+@@ -155,7 +155,7 @@
+   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
+   void operator=(const vtkSQLiteQuery &); // Not implemented.
+ 
+-  vtk_sqlite3_stmt *Statement;
++  sqlite3_stmt *Statement;
+   bool InitialFetch;
+   int InitialFetchResult;
+   char *LastErrorText;
+--- VTK/ThirdParty/sqlite/CMakeLists.txt
++++ VTK/ThirdParty/sqlite/CMakeLists.txt
+@@ -1,4 +1,4 @@
+-set(vtksqlite_THIRD_PARTY 1)
+-set(vtksqlite_LIBRARIES vtksqlite)
++#set(vtksqlite_THIRD_PARTY 1)
++set(vtksqlite_LIBRARIES sqlite3)
+ vtk_module_export_info()
+-add_subdirectory(vtksqlite)
++#add_subdirectory(vtksqlite)

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
new file mode 100644
index 00000000..58ddde9
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
@@ -0,0 +1,36 @@
+--- ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
++++ ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
+@@ -82,6 +82,7 @@
+     FIND_PROGRAM( CG_COMPILER cgc
+       /usr/bin
+       /usr/local/bin
++      /opt/nvidia-cg-toolkit/bin
+       DOC "The Cg Compiler"
+       )
+     GET_FILENAME_COMPONENT(CG_COMPILER_DIR "${CG_COMPILER}" PATH)
+@@ -89,6 +90,7 @@
+     FIND_PATH( CG_INCLUDE_PATH Cg/cg.h
+       /usr/include
+       /usr/local/include
++      /opt/nvidia-cg-toolkit/include
+       ${CG_COMPILER_SUPER_DIR}/include
+       DOC "The directory where Cg/cg.h resides"
+       )
+@@ -98,6 +100,8 @@
+       /usr/lib
+       /usr/local/lib64
+       /usr/local/lib
++      /opt/nvidia-cg-toolkit/lib64
++      /opt/nvidia-cg-toolkit/lib
+       ${CG_COMPILER_SUPER_DIR}/lib64
+       ${CG_COMPILER_SUPER_DIR}/lib
+       DOC "The Cg runtime library"
+@@ -108,6 +112,8 @@
+       /usr/lib
+       /usr/local/lib64
+       /usr/local/lib
++      /opt/nvidia-cg-toolkit/lib64
++      /opt/nvidia-cg-toolkit/lib
+       ${CG_COMPILER_SUPER_DIR}/lib64
+       ${CG_COMPILER_SUPER_DIR}/lib
+       DOC "The Cg runtime library"

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
new file mode 100644
index 00000000..65a5b20
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
@@ -0,0 +1,9 @@
+--- a/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx_orig	2014-01-11 15:02:10.000000000 +0100
++++ b/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx	2014-11-11 13:12:25.000000000 +0100
+@@ -28,5 +28,5 @@
+ // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
+ // the system
+-//#define GLX_GLXEXT_LEGACY
++#define GLX_GLXEXT_LEGACY
+ #include "GL/glx.h"
+ 

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
new file mode 100644
index 00000000..b7d3e40
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
@@ -0,0 +1,22 @@
+--- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
++++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
+@@ -1185,7 +1185,7 @@
+     if (bitmap)
+       {
+       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
+-      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
++      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
+                                   metaData.descent);
+       }
+     ++heightString;
+@@ -1952,8 +1952,8 @@
+     if (bitmap)
+       {
+       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
+-      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
+-      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
++      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
++      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
+       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
+       }
+     else

diff --git a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
new file mode 100644
index 00000000..5745716
--- /dev/null
+++ b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
@@ -0,0 +1,302 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils multilib versionator python-single-r1 cmake-utils
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}-source"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org"
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+
+RDEPEND="
+	dev-libs/expat
+	dev-libs/jsoncpp
+	dev-libs/libxml2:2
+	<dev-libs/protobuf-2.6
+	media-libs/freetype
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/hdf5[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sys-libs/zlib
+	virtual/jpeg:0
+	virtual/opengl
+	>=x11-libs/gl2ps-1.3.8
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt4
+			dev-qt/qtgui:4
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( virtual/mysql )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/twisted-core[${PYTHON_USEDEP}]
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
+		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt4? (
+		dev-qt/designer:4
+		dev-qt/qtgui:4
+		dev-qt/qtopengl:4
+		dev-qt/qthelp:4[compat]
+		dev-qt/qtsql:4
+		dev-qt/qtwebkit:4
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	doc? ( app-doc/doxygen )"
+
+S=${WORKDIR}/${MY_P%-source}
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+	# see patch headers for description
+	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
+		"${FILESDIR}"/${PN}-4.0.1-removesqlite.patch \
+		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
+		"${FILESDIR}"/${PN}-4.0.1-vtk-cg-path.patch \
+		"${FILESDIR}"/${PN}-4.0.1-Protobuf.patch \
+		"${FILESDIR}"/${P}-glxext-legacy.patch \
+		"${FILESDIR}"/${P}-no-fatal-warnings.patch \
+		"${FILESDIR}"/${P}-vtk-freetype.patch
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
+	sed -i \
+		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		CMakeLists.txt \
+		Plugins/SciberQuestToolKit/CMakeLists.txt \
+		ParaViewConfig.cmake.in \
+		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
+		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
+		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
+		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
+		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
+
+	# no proper switch
+	use nvcontrol || {
+		sed -i \
+			-e '/VTK_USE_NVCONTROL/s#1#0#' \
+			VTK/Rendering/OpenGL/CMakeLists.txt || die
+	}
+}
+
+src_configure() {
+	local mysql_lib mysql_includedir
+
+	if use mysql ; then
+		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
+			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
+			mysql_includedir="/usr/include/mysql"
+		else
+			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
+			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
+		fi
+	fi
+
+	# TODO: use system jsoncpp
+	# VTK_USE_SYSTEM_QTTESTING
+	# PARAVIEW_USE_SYSTEM_AUTOBAHN
+	local mycmakeargs=(
+		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+		-DBUILD_SHARED_LIBS=ON
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=ON
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_OGGTHEORA=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF
+		-DVTK_USE_SYSTEM_ZLIB=ON
+		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
+		-DVTK_USE_SYSTEM_ZOPE=ON
+		-DVTK_USE_SYSTEM_TWISTED=ON
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+		-DCMAKE_COLOR_MAKEFILE=TRUE
+		-DVTK_USE_OFFSCREEN=TRUE
+		-DCMAKE_USE_PTHREADS=ON
+		-DVTK_USE_FFMPEG_ENCODER=OFF
+		-DPROTOC_LOCATION=$(type -P protoc)
+		-DVTK_Group_StandAlone=ON
+		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
+		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
+		# force this module due to incorrect build system deps
+		# wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+		)
+
+	# TODO: XDMF_USE_MYSQL?
+	# VTK_WRAP_JAVA
+	mycmakeargs+=(
+		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
+		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
+		$(cmake-utils_use qt4 Module_vtkRenderingQt)
+		$(cmake-utils_use qt4 Module_vtkViewsQt)
+		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
+		$(cmake-utils_use qt4 VTK_Group_Qt)
+		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
+		$(cmake-utils_use boost Module_vtkInfovisBoost)
+		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
+		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
+		$(cmake-utils_use mpi VTK_Group_MPI)
+		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
+		$(cmake-utils_use mpi XDMF_BUILD_MPI)
+		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
+		$(cmake-utils_use python VTK_Group_ParaViewPython)
+		$(cmake-utils_use python XDMF_WRAP_PYTHON)
+		$(cmake-utils_use python Module_vtkPython)
+		$(cmake-utils_use python Module_pqPython)
+		$(cmake-utils_use python Module_vtkWrappingPythonCore)
+		$(cmake-utils_use python Module_vtkPVPythonSupport)
+		$(cmake-utils_use python Module_AutobahnPython)
+		$(cmake-utils_use python Module_Twisted)
+		$(cmake-utils_use python Module_ZopeInterface)
+		$(cmake-utils_use python Module_vtkmpi4py)
+		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
+		$(cmake-utils_use doc BUILD_DOCUMENTATION)
+		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
+		$(cmake-utils_use examples BUILD_EXAMPLES)
+		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
+		$(cmake-utils_use mysql Module_vtkIOMySQL)
+		$(cmake-utils_use sqlite Module_vtksqlite)
+		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
+		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
+		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
+		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
+		$(cmake-utils_use tk VTK_Group_Tk)
+		$(cmake-utils_use tk VTK_USE_TK)
+		$(cmake-utils_use tk Module_vtkRenderingTk)
+		$(cmake-utils_use tcl Module_vtkTclTk)
+		$(cmake-utils_use tcl Module_vtkWrappingTcl)
+		$(cmake-utils_use test BUILD_TESTING)
+		)
+
+	if use qt4 ; then
+		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
+		if use python ; then
+			# paraview cannot guess sip directory properly
+			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
+		fi
+	fi
+
+	# TODO: MantaView VaporPlugin VRPlugin
+	mycmakeargs+=(
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
+		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
+		# these are always needed for plugins
+		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
+		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
+		)
+
+	cmake-utils_src_configure
+}
+
+src_compile() {
+	cmake-utils_src_compile
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# set up the environment
+	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
+
+	newicon "${S}"/Applications/ParaView/pvIcon.png paraview.png
+	make_desktop_entry paraview "Paraview" paraview
+
+	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+pkg_postinst() {
+	# with Qt4.5 there seem to be issues reading data files
+	# under certain locales. Setting LC_ALL=C should fix these.
+	elog ""
+	elog "If you experience data corruption during parsing of"
+	elog "data files with paraview please try setting your"
+	elog "locale to LC_ALL=C."
+	elog "If you plan to use paraview component from an existing shell"
+	elog "you should run env-update and . /etc/profile first"
+	elog ""
+	elog "paraview no longer exports bundled python modules in PYTHONPATH"
+	elog "globally due to clashes of bundled packages with system-wide"
+	elog "site-packages. If you want to use paraview's python modules"
+	elog "export"
+	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
+	elog "as needed."
+}


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2017-05-31 21:14 Matthias Maier
  0 siblings, 0 replies; 10+ messages in thread
From: Matthias Maier @ 2017-05-31 21:14 UTC (permalink / raw
  To: gentoo-commits

commit:     cf6756245d694a3a9d2d3fc3816556b7ae886ea4
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Wed May 31 21:06:31 2017 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Wed May 31 21:14:12 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=cf675624

sci-visualization/paraview: drop old versions

Package-Manager: Portage-2.3.5, Repoman-2.3.2

 sci-visualization/paraview/Manifest                |   2 -
 .../paraview/files/paraview-4.0.1-Protobuf.patch   |  72 ---
 .../paraview/files/paraview-4.0.1-gcc-4.7.patch    |  28 --
 .../files/paraview-4.0.1-removesqlite.patch        | 517 -------------------
 .../files/paraview-4.0.1-vtk-cg-path.patch         |  36 --
 .../files/paraview-4.1.0-glxext-legacy.patch       |   9 -
 .../files/paraview-4.1.0-no-fatal-warnings.patch   |  19 -
 .../files/paraview-4.1.0-vtk-freetype.patch        |  22 -
 .../paraview-4.3.1-fix-development-install.patch   |  16 -
 .../files/paraview-4.4.0-removesqlite.patch        | 550 ---------------------
 .../paraview/paraview-4.1.0-r2.ebuild              | 301 -----------
 .../paraview/paraview-5.1.2-r1.ebuild              | 285 -----------
 12 files changed, 1857 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 59e0714fd48..3e38d76c5b2 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,3 +1 @@
-DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
-DIST ParaView-v5.1.2.tar.gz 51635420 SHA256 ff02b7307a256b7c6e8ad900dee5796297494df7f9a0804fe801eb2f66e6a187 SHA512 9204732ecbe5048c96536a2d63f37ec51f331416bab11c982797d07cd0233e1424193d1c8cac6dfe7e91696997f8aaf92c3a32d7b05674c0b176d93444672e40 WHIRLPOOL 1bbb95672279317304dde1f3123a51f3ca787f0f0b1a28ce09e53f0fbfdf685da89efeb2b13c0409982cbc5566e3984542eeeb519aa757bdd849186135c57a64
 DIST ParaView-v5.2.0.tar.gz 47087129 SHA256 894e42ef8475bb49e4e7e64f4ee2c37c714facd18bfbb1d6de7f69676b062c96 SHA512 d46b71a03717bde164fe2b6cdcc1c478384ad0d379e203e75e69e1532f8703b4ce12f8992d39e61d09e2ad7bbf1e249fc1f00c4cdd65aabef831e0dca83485f1 WHIRLPOOL bfc63e95d899e9d7be5432f5e6b6e7a68731726b199a7dd897a4bcbe242537fa5cf2210d20ef4c725ab8af92609b0fb875078ec537577a074672776771f4fd2f

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
deleted file mode 100644
index 6a09a1ac9a7..00000000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
+++ /dev/null
@@ -1,72 +0,0 @@
-http://paraview.org/Bug/view.php?id=13656
-
-diff -up ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
---- ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt	2012-11-13 15:17:53.980027098 -0700
-@@ -81,16 +81,24 @@
- #------------------------------------------------------------------------------
- # Generate the protbuf message file.
- #------------------------------------------------------------------------------
--get_target_property(PROTOC_LOCATION protoc_compiler LOCATION)
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	set (_PROTOC_COMPILER protoc)
-+	set (_PROTOC_DEPEND "")
-+else()
-+	set (_PROTOC_COMPILER protoc_compiler)
-+	set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
-+endif()
-+
-+get_target_property(PROTOC_LOCATION ${_PROTOC_COMPILER} LOCATION)
- add_custom_command(
-     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
-            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
-     
--    COMMAND protoc_compiler
-+    COMMAND ${_PROTOC_COMPILER}
-            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
-            --proto_path "@CMAKE_CURRENT_SOURCE_DIR@"
-            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
--    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
-+    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
-     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- )
- 
-@@ -109,5 +117,9 @@
- vtk_module_library(vtkPVServerImplementationCore
-   ${Module_SRCS})
- 
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	target_link_libraries(vtkPVServerImplementationCore ${CMAKE_THREAD_LIBS_INIT})
-+endif()
-+
- add_dependencies(vtkPVServerImplementationCore
-   protobuf_code_generation)
-diff -up ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf ParaView/ThirdParty/protobuf/CMakeLists.txt
---- ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ThirdParty/protobuf/CMakeLists.txt	2012-11-13 15:09:31.526673020 -0700
-@@ -34,7 +34,7 @@
- set (PROTOBUF_INSTALL_LIB_DIR ${VTK_INSTALL_LIBRARY_DIR})
- set (PROTOBUF_INSTALL_EXPORT_NAME ${VTK_INSTALL_EXPORT_NAME})
- 
--vtk_module_third_party(protobuf
-+vtk_module_third_party(Protobuf
-   INCLUDE_DIRS ${CMAKE_CURRENT_SOURCE_DIR}/vtkprotobuf/src
-   LIBRARIES protobuf
- )
-@@ -42,10 +42,12 @@
- # protobuf exports it's build-dir targets to a custom file
- # (PROTOBUF_EXPORTS.cmake). We don't care much about that. We export
- # build-dir targets ourselves.
--vtk_target_export(protobuf)
--vtk_target_export(protobuf-lite)
--if (NOT CMAKE_CROSSCOMPILING)
--  vtk_compile_tools_target_export(protoc_compiler)
-+if (NOT VTK_USE_SYSTEM_PROTOBUF)
-+  vtk_target_export(protobuf)
-+  vtk_target_export(protobuf-lite)
-+  if (NOT CMAKE_CROSSCOMPILING)
-+    vtk_compile_tools_target_export(protoc_compiler)
-+  endif()
- endif()
- 
- # All these exports don't add any install rules. However we make protobuf itself

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-gcc-4.7.patch b/sci-visualization/paraview/files/paraview-4.0.1-gcc-4.7.patch
deleted file mode 100644
index 1b941cfa943..00000000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-gcc-4.7.patch
+++ /dev/null
@@ -1,28 +0,0 @@
-Description: fix FTBFS with gcc-4.7
-Author: Mathieu Malaterre <malat@debian.org>
-Origin: http://anonscm.debian.org/gitweb/?p=collab-maint/vtk.git;a=commitdiff;h=428e763c995bb303805e07da70c1a34fc103d208
-Reviewed-by: Anton Gladky <gladky.anton@gmail.com>
-Last-Update: 2012-05-08
-
---- a/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx
-+++ b/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx
-@@ -35,6 +35,8 @@
- using namespace ftgl;
- #endif
- 
-+#include <stdint.h>
-+
- // Print debug info
- #define VTK_FTFC_DEBUG 0
- #define VTK_FTFC_DEBUG_CD 0
---- a/VTK/Rendering/FreeType/vtkFreeTypeUtilities.cxx
-+++ b/VTK/Rendering/FreeType/vtkFreeTypeUtilities.cxx
-@@ -36,6 +36,8 @@
- using namespace ftgl;
- #endif
- 
-+#include <stdint.h>
-+
- // Print debug info
- 
- #define VTK_FTFC_DEBUG 0

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
deleted file mode 100644
index be495b4fbb3..00000000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
+++ /dev/null
@@ -1,517 +0,0 @@
-Description: Import patch from VTK to remove sqlite
-Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
-Last-Update: Mon Feb 11 14:58:03 UTC 2013
-
-remove the internal copy of sqlite (vtksqlite)
-http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
-
---- VTK/IO/SQL/vtkSQLiteDatabase.cxx
-+++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
-@@ -29,7 +29,7 @@
- #include <vtksys/ios/fstream>
- #include <vtksys/ios/sstream>
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- vtkStandardNewMacro(vtkSQLiteDatabase);
- 
-@@ -307,15 +307,15 @@
-       }
-     }
- 
--  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
-+  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
- 
--  if (result != VTK_SQLITE_OK)
-+  if (result != SQLITE_OK)
-     {
-     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
-                   << result << " and message is "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
- 
--    vtk_sqlite3_close(this->SQLiteInstance);
-+    sqlite3_close(this->SQLiteInstance);
-     return false;
-     }
-   else
-@@ -334,8 +334,8 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_close(this->SQLiteInstance);
--    if (result != VTK_SQLITE_OK)
-+    int result = sqlite3_close(this->SQLiteInstance);
-+    if (result != SQLITE_OK)
-       {
-       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
-       }
-@@ -374,7 +374,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetTables(): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return this->Tables;
-     }
-@@ -403,7 +403,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return NULL;
-     }
-@@ -467,10 +467,10 @@
- // ----------------------------------------------------------------------
- bool vtkSQLiteDatabase::HasError()
- {
--  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
-+  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
- }
- 
- const char* vtkSQLiteDatabase::GetLastErrorText()
- {
--  return vtk_sqlite3_errmsg(this->SQLiteInstance);
-+  return sqlite3_errmsg(this->SQLiteInstance);
- }
---- VTK/IO/SQL/vtkSQLiteQuery.cxx
-+++ VTK/IO/SQL/vtkSQLiteQuery.cxx
-@@ -25,7 +25,7 @@
- #include "vtkVariant.h"
- #include "vtkVariantArray.h"
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- #include <assert.h>
- 
-@@ -43,7 +43,7 @@
- {
-   this->Statement = NULL;
-   this->InitialFetch = true;
--  this->InitialFetchResult=VTK_SQLITE_DONE;
-+  this->InitialFetchResult=SQLITE_DONE;
-   this->LastErrorText = NULL;
-   this->TransactionInProgress = false;
- }
-@@ -61,7 +61,7 @@
-     {
-     if (this->Database != NULL)
-       {
--      vtk_sqlite3_finalize(this->Statement);
-+      sqlite3_finalize(this->Statement);
-       this->Statement = NULL;
-       }
-     }
-@@ -131,8 +131,8 @@
-   if (this->Statement)
-     {
-     vtkDebugMacro(<<"Finalizing old statement");
--    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
--    if (finalizeStatus != VTK_SQLITE_OK)
-+    int finalizeStatus = sqlite3_finalize(this->Statement);
-+    if (finalizeStatus != SQLITE_OK)
-       {
-       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
-                       << finalizeStatus);
-@@ -151,19 +151,19 @@
-       return false;
-       }
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
-     const char *unused_statement;
- 
--    int prepareStatus = vtk_sqlite3_prepare_v2(db,
-+    int prepareStatus = sqlite3_prepare_v2(db,
-                                                this->Query,
-                                                static_cast<int>(strlen(this->Query)),
-                                                &this->Statement,
-                                                &unused_statement);
- 
--    if (prepareStatus != VTK_SQLITE_OK)
-+    if (prepareStatus != SQLITE_OK)
-       {
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-+      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
-                     << this->GetLastErrorText()
-                     << " on statement: '"
-                     << this->Query << "'");
-@@ -194,31 +194,31 @@
-     }
-   else
-     {
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   vtkDebugMacro(<<"Execute(): Query ready to execute.");
- 
-   this->InitialFetch = true;
--  int result = vtk_sqlite3_step(this->Statement);
-+  int result = sqlite3_step(this->Statement);
-   this->InitialFetchResult = result;
- 
--  if (result == VTK_SQLITE_DONE)
-+  if (result == SQLITE_DONE)
-     {
-     this->SetLastErrorText(NULL);
-     this->Active = true;
-     return true;
-     }
--  else if (result != VTK_SQLITE_ROW)
-+  else if (result != SQLITE_ROW)
-     {
-     vtkSQLiteDatabase *dbContainer =
-       vtkSQLiteDatabase::SafeDownCast(this->Database);
-     assert(dbContainer != NULL);
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
- 
--    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
-+    this->SetLastErrorText(sqlite3_errmsg(db));
-+    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
-                   << this->GetLastErrorText());
-     this->Active = false;
-     return false;
-@@ -239,7 +239,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_count(this->Statement);
-+    return sqlite3_column_count(this->Statement);
-     }
- }
- 
-@@ -259,7 +259,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_name(this->Statement, column);
-+    return sqlite3_column_name(this->Statement, column);
-     }
- }
- 
-@@ -279,22 +279,22 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
-+      case SQLITE_INTEGER:
-         return VTK_INT;
--      case VTK_SQLITE_FLOAT:
-+      case SQLITE_FLOAT:
-         return VTK_FLOAT;
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-         return VTK_STRING;
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-         return VTK_STRING; // until we have a BLOB type of our own
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-         return VTK_VOID; // ??? what makes sense here?
-       default:
-       {
-       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
--                    << vtk_sqlite3_column_type(this->Statement, column)
-+                    << sqlite3_column_type(this->Statement, column)
-                     <<" from SQLite.");
-       return VTK_VOID;
-       }
-@@ -315,7 +315,7 @@
-     {
-     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
-     this->InitialFetch = false;
--    if (this->InitialFetchResult == VTK_SQLITE_DONE)
-+    if (this->InitialFetchResult == SQLITE_DONE)
-       {
-       return false;
-       }
-@@ -326,12 +326,12 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_step(this->Statement);
--    if (result == VTK_SQLITE_DONE)
-+    int result = sqlite3_step(this->Statement);
-+    if (result == SQLITE_DONE)
-       {
-       return false;
-       }
--    else if (result == VTK_SQLITE_ROW)
-+    else if (result == SQLITE_ROW)
-       {
-       return true;
-       }
-@@ -339,8 +339,8 @@
-       {
-       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-       assert(dbContainer != NULL);
--      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
-+      sqlite3 *db = dbContainer->SQLiteInstance;
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-       vtkErrorMacro(<<"NextRow(): Database returned error code "
-                     << result << " with the following message: "
-                     << this->GetLastErrorText());
-@@ -366,33 +366,33 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
--        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
-+      case SQLITE_INTEGER:
-+        return vtkVariant(sqlite3_column_int(this->Statement, column));
- 
--      case VTK_SQLITE_FLOAT:
--        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
-+      case SQLITE_FLOAT:
-+        return vtkVariant(sqlite3_column_double(this->Statement, column));
- 
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-       {
-       vtksys_ios::ostringstream str;
--      str << vtk_sqlite3_column_text(this->Statement, column);
-+      str << sqlite3_column_text(this->Statement, column);
-       return vtkVariant(vtkStdString(str.str()));
-       }
- 
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-       {
-       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
-       // byte count, we ensure that the string will store all of the BLOB's bytes,
-       // even if there are NULL values.
- 
-       return vtkVariant(vtkStdString(
--        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
--        vtk_sqlite3_column_bytes(this->Statement, column)));
-+        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
-+        sqlite3_column_bytes(this->Statement, column)));
-       }
- 
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-       default:
-         return vtkVariant();
-       }
-@@ -423,11 +423,11 @@
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
- 
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = true;
-     this->SetLastErrorText(NULL);
-@@ -451,7 +451,7 @@
- {
-   if (this->Statement)
-     {
--    vtk_sqlite3_finalize(this->Statement);
-+    sqlite3_finalize(this->Statement);
-     this->Statement = NULL;
-     }
- 
-@@ -463,11 +463,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -499,11 +499,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -647,11 +647,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
-+  int status = sqlite3_bind_int(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int returned error: " << status;
-@@ -676,11 +676,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
-+  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int64 returned error: " << status;
-@@ -705,12 +705,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
-+  int status = sqlite3_bind_double(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_double returned error: " << status;
-@@ -734,12 +734,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
-+  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_text returned error: " << status;
-@@ -763,17 +763,17 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   int status =
--    vtk_sqlite3_bind_blob(this->Statement,
-+    sqlite3_bind_blob(this->Statement,
-                           index+1,
-                           data,
-                           length,
--                          VTK_SQLITE_TRANSIENT);
-+                          SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_blob returned error: " << status;
-@@ -797,12 +797,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_clear_bindings(this->Statement);
-+  int status = sqlite3_clear_bindings(this->Statement);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_clear_bindings returned error: " << status;
---- VTK/IO/SQL/vtkSQLiteDatabase.h
-+++ VTK/IO/SQL/vtkSQLiteDatabase.h
-@@ -49,7 +49,7 @@
- class vtkSQLQuery;
- class vtkSQLiteQuery;
- class vtkStringArray;
--struct vtk_sqlite3;
-+struct sqlite3;
- 
- class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
- {
-@@ -147,7 +147,7 @@
-   virtual bool ParseURL(const char* url);
- 
- private:
--  vtk_sqlite3 *SQLiteInstance;
-+  sqlite3 *SQLiteInstance;
- 
-   // We want this to be private, a user of this class
-   // should not be setting this for any reason
---- VTK/IO/SQL/vtkSQLiteQuery.h
-+++ VTK/IO/SQL/vtkSQLiteQuery.h
-@@ -47,7 +47,7 @@
- class vtkSQLiteDatabase;
- class vtkVariant;
- class vtkVariantArray;
--struct vtk_sqlite3_stmt;
-+struct sqlite3_stmt;
- 
- class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
- {
-@@ -155,7 +155,7 @@
-   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
-   void operator=(const vtkSQLiteQuery &); // Not implemented.
- 
--  vtk_sqlite3_stmt *Statement;
-+  sqlite3_stmt *Statement;
-   bool InitialFetch;
-   int InitialFetchResult;
-   char *LastErrorText;
---- VTK/ThirdParty/sqlite/CMakeLists.txt
-+++ VTK/ThirdParty/sqlite/CMakeLists.txt
-@@ -1,4 +1,4 @@
--set(vtksqlite_THIRD_PARTY 1)
--set(vtksqlite_LIBRARIES vtksqlite)
-+#set(vtksqlite_THIRD_PARTY 1)
-+set(vtksqlite_LIBRARIES sqlite3)
- vtk_module_export_info()
--add_subdirectory(vtksqlite)
-+#add_subdirectory(vtksqlite)

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
deleted file mode 100644
index 58ddde97d4f..00000000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
+++ /dev/null
@@ -1,36 +0,0 @@
---- ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-+++ ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-@@ -82,6 +82,7 @@
-     FIND_PROGRAM( CG_COMPILER cgc
-       /usr/bin
-       /usr/local/bin
-+      /opt/nvidia-cg-toolkit/bin
-       DOC "The Cg Compiler"
-       )
-     GET_FILENAME_COMPONENT(CG_COMPILER_DIR "${CG_COMPILER}" PATH)
-@@ -89,6 +90,7 @@
-     FIND_PATH( CG_INCLUDE_PATH Cg/cg.h
-       /usr/include
-       /usr/local/include
-+      /opt/nvidia-cg-toolkit/include
-       ${CG_COMPILER_SUPER_DIR}/include
-       DOC "The directory where Cg/cg.h resides"
-       )
-@@ -98,6 +100,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"
-@@ -108,6 +112,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
deleted file mode 100644
index 65a5b20d60f..00000000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
+++ /dev/null
@@ -1,9 +0,0 @@
---- a/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx_orig	2014-01-11 15:02:10.000000000 +0100
-+++ b/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx	2014-11-11 13:12:25.000000000 +0100
-@@ -28,5 +28,5 @@
- // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
- // the system
--//#define GLX_GLXEXT_LEGACY
-+#define GLX_GLXEXT_LEGACY
- #include "GL/glx.h"
- 

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch b/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
deleted file mode 100644
index 531be2f614f..00000000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
+++ /dev/null
@@ -1,19 +0,0 @@
-diff --git a/VTK/CMake/vtkCompilerExtras.cmake b/VTK/CMake/vtkCompilerExtras.cmake
-index 05b2db9..48d9395 100644
---- a/VTK/CMake/vtkCompilerExtras.cmake
-+++ b/VTK/CMake/vtkCompilerExtras.cmake
-@@ -15,11 +15,11 @@ if(CMAKE_COMPILER_IS_GNUCXX)
-   # If we are compiling on Linux then set some extra linker flags too
-   if(CMAKE_SYSTEM_NAME MATCHES Linux)
-     set(CMAKE_SHARED_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-     set(CMAKE_MODULE_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-     set (CMAKE_EXE_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-   endif()
- 
-   # Now check if we can use visibility to selectively export symbols

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
deleted file mode 100644
index b7d3e409cde..00000000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
-+++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
-@@ -1185,7 +1185,7 @@
-     if (bitmap)
-       {
-       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
--      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
-+      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
-                                   metaData.descent);
-       }
-     ++heightString;
-@@ -1952,8 +1952,8 @@
-     if (bitmap)
-       {
-       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
--      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
--      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
-+      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
-+      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
-       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
-       }
-     else

diff --git a/sci-visualization/paraview/files/paraview-4.3.1-fix-development-install.patch b/sci-visualization/paraview/files/paraview-4.3.1-fix-development-install.patch
deleted file mode 100644
index 4bc5e546fc9..00000000000
--- a/sci-visualization/paraview/files/paraview-4.3.1-fix-development-install.patch
+++ /dev/null
@@ -1,16 +0,0 @@
-https://bugs.gentoo.org/show_bug.cgi?id=560670
-http://www.paraview.org/Bug/view.php?id=15655
-
-diff --git a/Qt/Components/CMakeLists.txt b/Qt/Components/CMakeLists.txt
-index c45b4bf..8616a90 100644
---- a/Qt/Components/CMakeLists.txt
-+++ b/Qt/Components/CMakeLists.txt
-@@ -650,7 +650,7 @@ vtk_module_library(${vtk-module}
- #the pqSGExportStateWizard has subclasses that directly access
- #the UI file, and currently we don't have a clean way to break this hard
- #dependency, so for no we install this ui file.
--if(PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-+if(PARAVIEW_INSTALL_DEVELOPMENT_FILES AND PARAVIEW_ENABLE_PYTHON)
-   install(FILES "${CMAKE_CURRENT_BINARY_DIR}/ui_pqExportStateWizard.h"
-           DESTINATION "${VTK_INSTALL_INCLUDE_DIR}")
- endif()

diff --git a/sci-visualization/paraview/files/paraview-4.4.0-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.4.0-removesqlite.patch
deleted file mode 100644
index 6016b8d7337..00000000000
--- a/sci-visualization/paraview/files/paraview-4.4.0-removesqlite.patch
+++ /dev/null
@@ -1,550 +0,0 @@
-diff --git a/VTK/IO/SQL/CMakeLists.txt b/VTK/IO/SQL/CMakeLists.txt
-index a62a0b3..25089d9 100644
---- a/VTK/IO/SQL/CMakeLists.txt
-+++ b/VTK/IO/SQL/CMakeLists.txt
-@@ -28,3 +28,4 @@ set_source_files_properties(
-   )
- 
- vtk_module_library(vtkIOSQL ${Module_SRCS} ${SQLite_SRCS})
-+target_link_libraries(vtkIOSQL -lsqlite3)
-diff --git a/VTK/IO/SQL/module.cmake b/VTK/IO/SQL/module.cmake
-index f00bfd0..db7792f 100644
---- a/VTK/IO/SQL/module.cmake
-+++ b/VTK/IO/SQL/module.cmake
-@@ -5,7 +5,7 @@ vtk_module(vtkIOSQL
-     vtkIOCore
-   PRIVATE_DEPENDS
-     vtksys
--    vtksqlite # We should consider splitting this into a module.
-+#   vtksqlite # We should consider splitting this into a module.
-   TEST_DEPENDS
-     vtkIOLegacy
-     vtkTestingIOSQL
-diff --git a/VTK/IO/SQL/vtkSQLiteDatabase.cxx b/VTK/IO/SQL/vtkSQLiteDatabase.cxx
-index 8651670..07acfc2 100644
---- a/VTK/IO/SQL/vtkSQLiteDatabase.cxx
-+++ b/VTK/IO/SQL/vtkSQLiteDatabase.cxx
-@@ -29,7 +29,7 @@
- #include <fstream>
- #include <sstream>
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- vtkStandardNewMacro(vtkSQLiteDatabase);
- 
-@@ -307,15 +307,15 @@ bool vtkSQLiteDatabase::Open(const char* password, int mode)
-       }
-     }
- 
--  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
-+  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
- 
--  if (result != VTK_SQLITE_OK)
-+  if (result != SQLITE_OK)
-     {
-     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
-                   << result << " and message is "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
- 
--    vtk_sqlite3_close(this->SQLiteInstance);
-+    sqlite3_close(this->SQLiteInstance);
-     return false;
-     }
-   else
-@@ -334,8 +334,8 @@ void vtkSQLiteDatabase::Close()
-     }
-   else
-     {
--    int result = vtk_sqlite3_close(this->SQLiteInstance);
--    if (result != VTK_SQLITE_OK)
-+    int result = sqlite3_close(this->SQLiteInstance);
-+    if (result != SQLITE_OK)
-       {
-       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
-       }
-@@ -374,7 +374,7 @@ vtkStringArray * vtkSQLiteDatabase::GetTables()
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetTables(): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return this->Tables;
-     }
-@@ -403,7 +403,7 @@ vtkStringArray * vtkSQLiteDatabase::GetRecord(const char *table)
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return NULL;
-     }
-@@ -467,10 +467,10 @@ bool vtkSQLiteDatabase::ParseURL(const char* URL)
- // ----------------------------------------------------------------------
- bool vtkSQLiteDatabase::HasError()
- {
--  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
-+  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
- }
- 
- const char* vtkSQLiteDatabase::GetLastErrorText()
- {
--  return vtk_sqlite3_errmsg(this->SQLiteInstance);
-+  return sqlite3_errmsg(this->SQLiteInstance);
- }
-diff --git a/VTK/IO/SQL/vtkSQLiteDatabase.h b/VTK/IO/SQL/vtkSQLiteDatabase.h
-index 640355a..3e8cd57 100644
---- a/VTK/IO/SQL/vtkSQLiteDatabase.h
-+++ b/VTK/IO/SQL/vtkSQLiteDatabase.h
-@@ -49,7 +49,7 @@
- class vtkSQLQuery;
- class vtkSQLiteQuery;
- class vtkStringArray;
--struct vtk_sqlite3;
-+struct sqlite3;
- 
- class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
- {
-@@ -147,7 +147,7 @@ protected:
-   virtual bool ParseURL(const char* url);
- 
- private:
--  vtk_sqlite3 *SQLiteInstance;
-+  sqlite3 *SQLiteInstance;
- 
-   // We want this to be private, a user of this class
-   // should not be setting this for any reason
-diff --git a/VTK/IO/SQL/vtkSQLiteQuery.cxx b/VTK/IO/SQL/vtkSQLiteQuery.cxx
-index 31a15f1..ea12405 100644
---- a/VTK/IO/SQL/vtkSQLiteQuery.cxx
-+++ b/VTK/IO/SQL/vtkSQLiteQuery.cxx
-@@ -25,7 +25,7 @@
- #include "vtkVariant.h"
- #include "vtkVariantArray.h"
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- #include <cassert>
- 
-@@ -43,7 +43,7 @@ vtkSQLiteQuery::vtkSQLiteQuery()
- {
-   this->Statement = NULL;
-   this->InitialFetch = true;
--  this->InitialFetchResult=VTK_SQLITE_DONE;
-+  this->InitialFetchResult=SQLITE_DONE;
-   this->LastErrorText = NULL;
-   this->TransactionInProgress = false;
- }
-@@ -61,7 +61,7 @@ vtkSQLiteQuery::~vtkSQLiteQuery()
-     {
-     if (this->Database != NULL)
-       {
--      vtk_sqlite3_finalize(this->Statement);
-+      sqlite3_finalize(this->Statement);
-       this->Statement = NULL;
-       }
-     }
-@@ -128,8 +128,8 @@ bool vtkSQLiteQuery::SetQuery(const char *newQuery)
-   if (this->Statement)
-     {
-     vtkDebugMacro(<<"Finalizing old statement");
--    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
--    if (finalizeStatus != VTK_SQLITE_OK)
-+    int finalizeStatus = sqlite3_finalize(this->Statement);
-+    if (finalizeStatus != SQLITE_OK)
-       {
-       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
-                       << finalizeStatus);
-@@ -148,19 +148,19 @@ bool vtkSQLiteQuery::SetQuery(const char *newQuery)
-       return false;
-       }
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
-     const char *unused_statement;
- 
--    int prepareStatus = vtk_sqlite3_prepare_v2(db,
-+    int prepareStatus = sqlite3_prepare_v2(db,
-                                                this->Query,
-                                                static_cast<int>(strlen(this->Query)),
-                                                &this->Statement,
-                                                &unused_statement);
- 
--    if (prepareStatus != VTK_SQLITE_OK)
-+    if (prepareStatus != SQLITE_OK)
-       {
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-+      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
-                     << this->GetLastErrorText()
-                     << " on statement: '"
-                     << this->Query << "'");
-@@ -191,31 +191,31 @@ bool vtkSQLiteQuery::Execute()
-     }
-   else
-     {
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   vtkDebugMacro(<<"Execute(): Query ready to execute.");
- 
-   this->InitialFetch = true;
--  int result = vtk_sqlite3_step(this->Statement);
-+  int result = sqlite3_step(this->Statement);
-   this->InitialFetchResult = result;
- 
--  if (result == VTK_SQLITE_DONE)
-+  if (result == SQLITE_DONE)
-     {
-     this->SetLastErrorText(NULL);
-     this->Active = true;
-     return true;
-     }
--  else if (result != VTK_SQLITE_ROW)
-+  else if (result != SQLITE_ROW)
-     {
-     vtkSQLiteDatabase *dbContainer =
-       vtkSQLiteDatabase::SafeDownCast(this->Database);
-     assert(dbContainer != NULL);
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
- 
--    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
-+    this->SetLastErrorText(sqlite3_errmsg(db));
-+    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
-                   << this->GetLastErrorText());
-     this->Active = false;
-     return false;
-@@ -236,7 +236,7 @@ int vtkSQLiteQuery::GetNumberOfFields()
-     }
-   else
-     {
--    return vtk_sqlite3_column_count(this->Statement);
-+    return sqlite3_column_count(this->Statement);
-     }
- }
- 
-@@ -256,7 +256,7 @@ const char * vtkSQLiteQuery::GetFieldName(int column)
-     }
-   else
-     {
--    return vtk_sqlite3_column_name(this->Statement, column);
-+    return sqlite3_column_name(this->Statement, column);
-     }
- }
- 
-@@ -276,22 +276,22 @@ int vtkSQLiteQuery::GetFieldType(int column)
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
-+      case SQLITE_INTEGER:
-         return VTK_INT;
--      case VTK_SQLITE_FLOAT:
-+      case SQLITE_FLOAT:
-         return VTK_FLOAT;
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-         return VTK_STRING;
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-         return VTK_STRING; // until we have a BLOB type of our own
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-         return VTK_VOID; // ??? what makes sense here?
-       default:
-       {
-       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
--                    << vtk_sqlite3_column_type(this->Statement, column)
-+                    << sqlite3_column_type(this->Statement, column)
-                     <<" from SQLite.");
-       return VTK_VOID;
-       }
-@@ -312,7 +312,7 @@ bool vtkSQLiteQuery::NextRow()
-     {
-     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
-     this->InitialFetch = false;
--    if (this->InitialFetchResult == VTK_SQLITE_DONE)
-+    if (this->InitialFetchResult == SQLITE_DONE)
-       {
-       return false;
-       }
-@@ -323,12 +323,12 @@ bool vtkSQLiteQuery::NextRow()
-     }
-   else
-     {
--    int result = vtk_sqlite3_step(this->Statement);
--    if (result == VTK_SQLITE_DONE)
-+    int result = sqlite3_step(this->Statement);
-+    if (result == SQLITE_DONE)
-       {
-       return false;
-       }
--    else if (result == VTK_SQLITE_ROW)
-+    else if (result == SQLITE_ROW)
-       {
-       return true;
-       }
-@@ -336,8 +336,8 @@ bool vtkSQLiteQuery::NextRow()
-       {
-       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-       assert(dbContainer != NULL);
--      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
-+      sqlite3 *db = dbContainer->SQLiteInstance;
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-       vtkErrorMacro(<<"NextRow(): Database returned error code "
-                     << result << " with the following message: "
-                     << this->GetLastErrorText());
-@@ -363,33 +363,33 @@ vtkVariant vtkSQLiteQuery::DataValue(vtkIdType column)
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
--        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
-+      case SQLITE_INTEGER:
-+        return vtkVariant(sqlite3_column_int(this->Statement, column));
- 
--      case VTK_SQLITE_FLOAT:
--        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
-+      case SQLITE_FLOAT:
-+        return vtkVariant(sqlite3_column_double(this->Statement, column));
- 
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-       {
-       std::ostringstream str;
--      str << vtk_sqlite3_column_text(this->Statement, column);
-+      str << sqlite3_column_text(this->Statement, column);
-       return vtkVariant(vtkStdString(str.str()));
-       }
- 
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-       {
-       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
-       // byte count, we ensure that the string will store all of the BLOB's bytes,
-       // even if there are NULL values.
- 
-       return vtkVariant(vtkStdString(
--        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
--        vtk_sqlite3_column_bytes(this->Statement, column)));
-+        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
-+        sqlite3_column_bytes(this->Statement, column)));
-       }
- 
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-       default:
-         return vtkVariant();
-       }
-@@ -420,11 +420,11 @@ bool vtkSQLiteQuery::BeginTransaction()
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
- 
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = true;
-     this->SetLastErrorText(NULL);
-@@ -448,7 +448,7 @@ bool vtkSQLiteQuery::CommitTransaction()
- {
-   if (this->Statement)
-     {
--    vtk_sqlite3_finalize(this->Statement);
-+    sqlite3_finalize(this->Statement);
-     this->Statement = NULL;
-     }
- 
-@@ -460,11 +460,11 @@ bool vtkSQLiteQuery::CommitTransaction()
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -496,11 +496,11 @@ bool vtkSQLiteQuery::RollbackTransaction()
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -644,11 +644,11 @@ bool vtkSQLiteQuery::BindIntegerParameter(int index, int value)
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
-+  int status = sqlite3_bind_int(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     std::ostringstream errormessage;
-     errormessage << "sqlite_bind_int returned error: " << status;
-@@ -673,11 +673,11 @@ bool vtkSQLiteQuery::BindInt64Parameter(int index, vtkTypeInt64 value)
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
-+  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     std::ostringstream errormessage;
-     errormessage << "sqlite_bind_int64 returned error: " << status;
-@@ -702,12 +702,12 @@ bool vtkSQLiteQuery::BindDoubleParameter(int index, double value)
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
-+  int status = sqlite3_bind_double(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     std::ostringstream errormessage;
-     errormessage << "sqlite_bind_double returned error: " << status;
-@@ -731,12 +731,12 @@ bool vtkSQLiteQuery::BindStringParameter(int index, const char *value, int lengt
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
-+  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     std::ostringstream errormessage;
-     errormessage << "sqlite_bind_text returned error: " << status;
-@@ -760,17 +760,17 @@ bool vtkSQLiteQuery::BindBlobParameter(int index, const void *data, int length)
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   int status =
--    vtk_sqlite3_bind_blob(this->Statement,
-+    sqlite3_bind_blob(this->Statement,
-                           index+1,
-                           data,
-                           length,
--                          VTK_SQLITE_TRANSIENT);
-+                          SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     std::ostringstream errormessage;
-     errormessage << "sqlite_bind_blob returned error: " << status;
-@@ -794,12 +794,12 @@ bool vtkSQLiteQuery::ClearParameterBindings()
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_clear_bindings(this->Statement);
-+  int status = sqlite3_clear_bindings(this->Statement);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     std::ostringstream errormessage;
-     errormessage << "sqlite_clear_bindings returned error: " << status;
-diff --git a/VTK/IO/SQL/vtkSQLiteQuery.h b/VTK/IO/SQL/vtkSQLiteQuery.h
-index bfab39a..db4deb4 100644
---- a/VTK/IO/SQL/vtkSQLiteQuery.h
-+++ b/VTK/IO/SQL/vtkSQLiteQuery.h
-@@ -47,7 +47,7 @@
- class vtkSQLiteDatabase;
- class vtkVariant;
- class vtkVariantArray;
--struct vtk_sqlite3_stmt;
-+struct sqlite3_stmt;
- 
- class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
- {
-@@ -155,7 +155,7 @@ private:
-   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
-   void operator=(const vtkSQLiteQuery &); // Not implemented.
- 
--  vtk_sqlite3_stmt *Statement;
-+  sqlite3_stmt *Statement;
-   bool InitialFetch;
-   int InitialFetchResult;
-   char *LastErrorText;
-diff --git a/VTK/ThirdParty/sqlite/CMakeLists.txt b/VTK/ThirdParty/sqlite/CMakeLists.txt
-index 9e1c067..a55764b 100644
---- a/VTK/ThirdParty/sqlite/CMakeLists.txt
-+++ b/VTK/ThirdParty/sqlite/CMakeLists.txt
-@@ -1,4 +1,4 @@
--set(vtksqlite_THIRD_PARTY 1)
--set(vtksqlite_LIBRARIES vtksqlite)
--vtk_module_export_info()
--add_subdirectory(vtksqlite)
-+#set(vtksqlite_THIRD_PARTY 1)
-+#set(vtksqlite_LIBRARIES sqlite3)
-+#vtk_module_export_info()
-+#add_subdirectory(vtksqlite)
-diff --git a/VTK/ThirdParty/sqlite/module.cmake b/VTK/ThirdParty/sqlite/module.cmake
-index 8dbb3a7..db837c5 100644
---- a/VTK/ThirdParty/sqlite/module.cmake
-+++ b/VTK/ThirdParty/sqlite/module.cmake
-@@ -1 +1 @@
--vtk_module(vtksqlite EXCLUDE_FROM_WRAPPING)
-+#vtk_module(vtksqlite EXCLUDE_FROM_WRAPPING)

diff --git a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
deleted file mode 100644
index 2478621dbd2..00000000000
--- a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
+++ /dev/null
@@ -1,301 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	<dev-libs/protobuf-2.6
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core[${PYTHON_USEDEP}]
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	doc? ( app-doc/doxygen )"
-
-S=${WORKDIR}/${MY_P%-source}
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.0.1-removesqlite.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${PN}-4.0.1-vtk-cg-path.patch \
-		"${FILESDIR}"/${PN}-4.0.1-Protobuf.patch \
-		"${FILESDIR}"/${P}-glxext-legacy.patch \
-		"${FILESDIR}"/${P}-no-fatal-warnings.patch \
-		"${FILESDIR}"/${P}-vtk-freetype.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	local mysql_lib mysql_includedir
-
-	if use mysql ; then
-		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
-			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
-			mysql_includedir="/usr/include/mysql"
-		else
-			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
-			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
-		fi
-	fi
-
-	# TODO: use system jsoncpp
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
-		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}

diff --git a/sci-visualization/paraview/paraview-5.1.2-r1.ebuild b/sci-visualization/paraview/paraview-5.1.2-r1.ebuild
deleted file mode 100644
index cecb858d41a..00000000000
--- a/sci-visualization/paraview/paraview-5.1.2-r1.ebuild
+++ /dev/null
@@ -1,285 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils cmake-utils multilib python-single-r1 toolchain-funcs versionator
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp plugins python +qt5 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	<dev-libs/jsoncpp-1.7.5
-	dev-libs/libxml2:2
-	dev-libs/protobuf
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	virtual/glu
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt5
-			dev-qt/qtgui:5[-gles2]
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py )
-		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5[-gles2]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2]
-		dev-qt/qtsql:5
-		dev-qt/qttest:5
-		dev-qt/qtwebkit:5
-		dev-qt/qtx11extras:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	>=dev-util/cmake-3.4
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_pretend() {
-	if [[ ${MERGE_TYPE} != "binary" ]] && use openmp && [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp; then
-		eerror "For USE=openmp a gcc with openmp support is required"
-		eerror
-		return 1
-	fi
-}
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.3.1-fix-development-install.patch \
-		"${FILESDIR}"/${PN}-4.4.0-removesqlite.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	if use qt5; then
-		export QT_SELECT=qt5
-	fi
-
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		-DVTK_RENDERING_BACKEND=OpenGL2
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=OFF
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt5 PARAVIEW_BUILD_QT_GUI)
-		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt5 Module_vtkRenderingQt)
-		$(cmake-utils_use qt5 Module_vtkViewsQt)
-		$(cmake-utils_use qt5 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt5 VTK_Group_Qt)
-		$(cmake-utils_use !qt5 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt5 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use qt5 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2018-04-01 20:42 Matthias Maier
  0 siblings, 0 replies; 10+ messages in thread
From: Matthias Maier @ 2018-04-01 20:42 UTC (permalink / raw
  To: gentoo-commits

commit:     6b900193b7504f5b0c9eab4a56e3584136f7e426
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Apr  1 18:54:03 2018 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Apr  1 20:40:32 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6b900193

sci-visualization/paraview: version bump to 5.4.1

 * add external CGNS dependency
 * version bump to 5.4.1
 * fix compilation with dev-libs/jsoncpp-1.8.4
 * drop 5.2.0

Closes: https://bugs.gentoo.org/636112
Closes: https://bugs.gentoo.org/644716
Closes: https://bugs.gentoo.org/643748

Package-Manager: Portage-2.3.27, Repoman-2.3.9

 sci-visualization/paraview/Manifest                |   2 +-
 .../files/paraview-5.4.1-jsoncpp_1.8.4.patch       |  17 ++
 ...paraview-5.2.0.ebuild => paraview-5.4.1.ebuild} | 186 +++++++++++----------
 3 files changed, 112 insertions(+), 93 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 56c57c407de..de7bfe7a43c 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,2 +1,2 @@
-DIST ParaView-v5.2.0.tar.gz 47087129 BLAKE2B 4792569c28c8c800882389810cb3a73087ee64a26971b59ed76d3e5b3c0e121b2dad3736f610cfef8cdc99b61098cee82379bd08e06f750c0eb2e0728ec3535d SHA512 d46b71a03717bde164fe2b6cdcc1c478384ad0d379e203e75e69e1532f8703b4ce12f8992d39e61d09e2ad7bbf1e249fc1f00c4cdd65aabef831e0dca83485f1
 DIST ParaView-v5.3.0.tar.gz 45173528 BLAKE2B 878e8dae0b5de4bee5d72a4a272a5048fa587fac8e949d39c8e040b9fe3553b787e53f183ae98d20f24755db7e355280b85a9f572037764c53740de2eb4a9e30 SHA512 3dc3c2a1c27a0f0dc82fc04ce84477a26aacb329d6ea42c276c4204e39d11bc78adbc1807e1e7168aade31aa48b6d628775841b8b94b5122084eac46e358a23f
+DIST ParaView-v5.4.1.tar.gz 43783720 BLAKE2B 2197d7f390b7192eb58ad67b88c84119da35fc4229547a42ef12a600874304addb410d0a53684a785855f617011762bf6a819231821f0bff8ee226111df8e577 SHA512 6a720f9ed9e03b7b97f0e84bb6d67b2a28c4ffc5079427d544e9522ce313264eed273c9b7ae13b11e34ab4de903132a22bacc337452d1e9da9876416449520f5

diff --git a/sci-visualization/paraview/files/paraview-5.4.1-jsoncpp_1.8.4.patch b/sci-visualization/paraview/files/paraview-5.4.1-jsoncpp_1.8.4.patch
new file mode 100644
index 00000000000..b4b64e94eef
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.4.1-jsoncpp_1.8.4.patch
@@ -0,0 +1,17 @@
+diff --git a/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx b/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx
+index b6e2b55..d27ad9d 100644
+--- a/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx
++++ b/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx
+@@ -788,7 +788,10 @@ public:
+           this->GetSettingBelowPriority(propertySettingCString, highestPriority);
+         if (lowerPriorityValue.isNull())
+         {
+-          if (!proxyValue.removeMember(property->GetXMLName()).isNull())
++          // Allocated as done in Json::Value removeMember(const char* key).
++          Json::Value removedValue;
++          if (proxyValue.removeMember(property->GetXMLName(), &removedValue) &&
++            !removedValue.isNull())
+           {
+             this->Modified();
+           }
+

diff --git a/sci-visualization/paraview/paraview-5.2.0.ebuild b/sci-visualization/paraview/paraview-5.4.1.ebuild
similarity index 53%
rename from sci-visualization/paraview/paraview-5.2.0.ebuild
rename to sci-visualization/paraview/paraview-5.4.1.ebuild
index 5abd820a733..ebd30586b09 100644
--- a/sci-visualization/paraview/paraview-5.2.0.ebuild
+++ b/sci-visualization/paraview/paraview-5.4.1.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
+EAPI=6
 
 PYTHON_COMPAT=( python2_7 )
 inherit eutils cmake-utils multilib python-single-r1 toolchain-funcs versionator
@@ -25,21 +25,26 @@ REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
 	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
 
 RDEPEND="
+	app-arch/lz4
 	dev-libs/expat
 	dev-libs/jsoncpp
 	dev-libs/libxml2:2
 	dev-libs/protobuf
+	dev-libs/pugixml
 	media-libs/freetype
+	media-libs/glew:0
 	media-libs/libpng:0
 	media-libs/libtheora
 	media-libs/tiff:0=
+	sci-libs/cgnslib
 	sci-libs/hdf5[mpi=]
 	>=sci-libs/netcdf-4.2[hdf5]
 	>=sci-libs/netcdf-cxx-4.2:3
+	sci-libs/xdmf2
 	sys-libs/zlib
+	virtual/glu
 	virtual/jpeg:0
 	virtual/opengl
-	virtual/glu
 	x11-libs/libX11
 	x11-libs/libXext
 	x11-libs/libXmu
@@ -55,10 +60,14 @@ RDEPEND="
 	mysql? ( virtual/mysql )
 	python? (
 		${PYTHON_DEPS}
+		dev-python/constantly[${PYTHON_USEDEP}]
+		dev-python/incremental[${PYTHON_USEDEP}]
 		dev-python/matplotlib[${PYTHON_USEDEP}]
 		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/pygments[${PYTHON_USEDEP}]
 		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core
+		dev-python/six[${PYTHON_USEDEP}]
+		dev-python/twisted-core[${PYTHON_USEDEP}]
 		dev-python/zope-interface[${PYTHON_USEDEP}]
 		mpi? ( dev-python/mpi4py )
 		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
@@ -86,6 +95,8 @@ S="${WORKDIR}/${MY_P}"
 
 PATCHES=(
 	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
+	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
+	"${FILESDIR}"/${P}-jsoncpp_1.8.4.patch
 )
 
 pkg_pretend() {
@@ -102,7 +113,7 @@ pkg_setup() {
 }
 
 src_prepare() {
-	cmake-utils_src_prepare
+	default
 
 	# lib64 fixes
 	sed -i \
@@ -114,13 +125,10 @@ src_prepare() {
 	sed -i \
 		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
 		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
 		ParaViewConfig.cmake.in \
 		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
 		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
+		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx || die
 
 	# no proper switch
 	if ! use nvcontrol; then
@@ -135,8 +143,6 @@ src_configure() {
 		export QT_SELECT=qt5
 	fi
 
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
 	local mycmakeargs=(
 		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
 		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
@@ -148,24 +154,33 @@ src_configure() {
 		-DCMAKE_COLOR_MAKEFILE=TRUE
 		-DCMAKE_USE_PTHREADS=ON
 		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DPROTOC_LOCATION=$(type -P protoc)
 		-DVTK_Group_StandAlone=ON
 		-DVTK_RENDERING_BACKEND=OpenGL2
 		-DVTK_USE_FFMPEG_ENCODER=OFF
 		-DVTK_USE_OFFSCREEN=TRUE
+		# -DVTK_USE_SYSTEM_AUTOBAHN once we transitioned to Python 3...
+		-DVTK_USE_SYSTEM_CGNS=ON
+		-DVTK_USE_SYSTEM_PUGIXML=ON
+		-DVTK_USE_SYSTEM_PYGMENTS=ON
 		-DVTK_USE_SYSTEM_EXPAT=ON
 		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=OFF
+		-DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified sources
+		-DVTK_USE_SYSTEM_GLEW=ON
 		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_INCREMENTAL=ON
 		-DVTK_USE_SYSTEM_JPEG=ON
 		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBHARU=OFF # doesn't compile, requires modified sources
 		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_LZ4=ON
+		-DVTK_USE_SYSTEM_MPI4PY=ON
 		-DVTK_USE_SYSTEM_NETCDF=ON
 		-DVTK_USE_SYSTEM_OGGTHEORA=ON
 		-DVTK_USE_SYSTEM_PNG=ON
 		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_SIX=ON
 		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=ON
 		-DVTK_USE_SYSTEM_TWISTED=ON
 		-DVTK_USE_SYSTEM_XDMF2=OFF
 		-DVTK_USE_SYSTEM_ZLIB=ON
@@ -175,95 +190,82 @@ src_configure() {
 		-DModule_vtkUtilitiesProcessXML=ON
 		)
 
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
 	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt5 PARAVIEW_BUILD_QT_GUI)
+		-DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
+
+		-DModule_vtkGUISupportQtOpenGL="$(usex qt5)"
+		-DModule_vtkGUISupportQtSQL="$(usex qt5)"
+		-DModule_vtkGUISupportQtWebkit="$(usex qt5)"
+		-DModule_vtkRenderingQt="$(usex qt5)"
+		-DModule_vtkViewsQt="$(usex qt5)"
+		-DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
+		-DVTK_Group_ParaViewQt="$(usex qt5)"
+		-DVTK_Group_Qt="$(usex qt5)"
+		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
 		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt5 Module_vtkRenderingQt)
-		$(cmake-utils_use qt5 Module_vtkViewsQt)
-		$(cmake-utils_use qt5 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt5 VTK_Group_Qt)
-		$(cmake-utils_use !qt5 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt5 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
+
+		-DModule_vtkInfovisBoost="$(usex boost)"
+
+		-DPARAVIEW_USE_ICE_T="$(usex mpi)"
+		-DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
+		-DPARAVIEW_USE_MPI="$(usex mpi)"
+		-DVTK_Group_MPI="$(usex mpi)"
+		-DVTK_XDMF_USE_MPI="$(usex mpi)"
+		-DXDMF_BUILD_MPI="$(usex mpi)"
+
+		-DModule_AutobahnPython="$(usex python)"
+		-DModule_pqPython="$(usex python)"
+		-DModule_Twisted="$(usex python)"
+		-DModule_vtkmpi4py="$(usex python)"
+		-DModule_vtkPython="$(usex python)"
+		-DModule_vtkWrappingPythonCore="$(usex python)"
+		-DModule_ZopeInterface="$(usex python)"
+		-DPARAVIEW_ENABLE_PYTHON="$(usex python)"
+		-DXDMF_WRAP_PYTHON="$(usex python)"
+
+		-DBUILD_DOCUMENTATION="$(usex doc)"
+
+		-DBUILD_EXAMPLES="$(usex examples)"
+
+		-DModule_vtkIOMySQL="$(usex mysql)"
+
+		-DModule_vtksqlite="$(usex sqlite)"
+
+		-DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
+
+		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
+		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
+		-DModule_vtkIOFFMPEG="$(usex ffmpeg)"
+
+		-DVTK_Group_Tk="$(usex tk)"
+		-DVTK_USE_TK="$(usex tk)"
+		-DModule_vtkRenderingTk="$(usex tk)"
+		-DModule_vtkTclTk="$(usex tcl)"
+		-DModule_vtkWrappingTcl="$(usex tcl)"
+		-DBUILD_TESTING="$(usex test)"
 		)
 
 	if use openmp; then
 		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
 	fi
 
-	if use qt5 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
 	# TODO: MantaView VaporPlugin VRPlugin
 	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
+		-DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
 		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
+		-DModule_vtkFiltersFlowPaths="$(usex plugins)"
+		-DModule_vtkPVServerManagerApplication="$(usex plugins)"
 		)
 
 	cmake-utils_src_configure


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2020-07-02  0:03 Andreas Sturmlechner
  0 siblings, 0 replies; 10+ messages in thread
From: Andreas Sturmlechner @ 2020-07-02  0:03 UTC (permalink / raw
  To: gentoo-commits

commit:     27516179bd0c405eaea4c5d3c6df21414f183c5f
Author:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Wed Jul  1 23:37:15 2020 +0000
Commit:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Thu Jul  2 00:03:09 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=27516179

sci-visualization/paraview: Fix build with Qt 5.15

Closes: https://bugs.gentoo.org/729348
Package-Manager: Portage-2.3.103, Repoman-2.3.23
Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>

 .../files/paraview-5.8.0-w-vtk-8.2.0-qt-5.15.patch | 37 ++++++++++++++++++++++
 .../paraview/paraview-5.8.0-r3.ebuild              |  1 +
 2 files changed, 38 insertions(+)

diff --git a/sci-visualization/paraview/files/paraview-5.8.0-w-vtk-8.2.0-qt-5.15.patch b/sci-visualization/paraview/files/paraview-5.8.0-w-vtk-8.2.0-qt-5.15.patch
new file mode 100644
index 00000000000..1f76b84ac2d
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.8.0-w-vtk-8.2.0-qt-5.15.patch
@@ -0,0 +1,37 @@
+From 797f28697d5ba50c1fa2bc5596af626a3c277826 Mon Sep 17 00:00:00 2001
+From: "Andrew J. P. Maclean" <andrew.amaclean@gmail.com>
+Date: Wed, 27 May 2020 15:27:15 +1000
+Subject: [PATCH] Qt 5.15 needs the include file QPainterPath
+
+---
+ Rendering/Qt/vtkQtLabelRenderStrategy.cxx | 1 +
+ Rendering/Qt/vtkQtStringToImage.cxx       | 1 +
+ 2 files changed, 2 insertions(+)
+
+diff --git a/VTK/Rendering/Qt/vtkQtLabelRenderStrategy.cxx b/VTK/Rendering/Qt/vtkQtLabelRenderStrategy.cxx
+index afda585cca..eca65c64cd 100644
+--- a/VTK/Rendering/Qt/vtkQtLabelRenderStrategy.cxx
++++ b/VTK/Rendering/Qt/vtkQtLabelRenderStrategy.cxx
+@@ -41,6 +41,7 @@
+ #include <QImage>
+ #include <QMap>
+ #include <QPainter>
++#include <QPainterPath>
+ #include <QPair>
+ #include <QPixmap>
+ #include <QTextDocument>
+diff --git a/VTK/Rendering/Qt/vtkQtStringToImage.cxx b/VTK/Rendering/Qt/vtkQtStringToImage.cxx
+index 659c71570e..fbb9b78f05 100644
+--- a/VTK/Rendering/Qt/vtkQtStringToImage.cxx
++++ b/VTK/Rendering/Qt/vtkQtStringToImage.cxx
+@@ -30,6 +30,7 @@
+ #include <QFontMetrics>
+ #include <QImage>
+ #include <QPainter>
++#include <QPainterPath>
+ #include <QPixmap>
+ #include <QString>
+ #include <QTextDocument>
+-- 
+2.26.2
+

diff --git a/sci-visualization/paraview/paraview-5.8.0-r3.ebuild b/sci-visualization/paraview/paraview-5.8.0-r3.ebuild
index fad68f534bd..ed78dca4764 100644
--- a/sci-visualization/paraview/paraview-5.8.0-r3.ebuild
+++ b/sci-visualization/paraview/paraview-5.8.0-r3.ebuild
@@ -105,6 +105,7 @@ PATCHES=(
 	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
 	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
 	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
+	"${FILESDIR}"/${P}-w-vtk-8.2.0-qt-5.15.patch
 )
 
 CMAKE_MAKEFILE_GENERATOR="emake" #579474


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2021-05-11 18:26 Sam James
  0 siblings, 0 replies; 10+ messages in thread
From: Sam James @ 2021-05-11 18:26 UTC (permalink / raw
  To: gentoo-commits

commit:     2195a932afe65a512ecc627598d3a345d48ec348
Author:     Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Tue May 11 18:26:26 2021 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Tue May 11 18:26:42 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2195a932

sci-visualization/paraview: fix build with gcc 11

Closes: https://bugs.gentoo.org/788055
Signed-off-by: Sam James <sam <AT> gentoo.org>

 .../paraview/files/paraview-5.9.0-gcc11-include.patch        | 12 ++++++++++++
 sci-visualization/paraview/paraview-5.9.0.ebuild             |  1 +
 2 files changed, 13 insertions(+)

diff --git a/sci-visualization/paraview/files/paraview-5.9.0-gcc11-include.patch b/sci-visualization/paraview/files/paraview-5.9.0-gcc11-include.patch
new file mode 100644
index 00000000000..900439a7ce6
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.9.0-gcc11-include.patch
@@ -0,0 +1,12 @@
+diff --git a/VTK/Common/Core/vtkGenericDataArrayLookupHelper.h b/VTK/Common/Core/vtkGenericDataArrayLookupHelper.h
+index ab9d5724..202aaa27 100644
+--- a/VTK/Common/Core/vtkGenericDataArrayLookupHelper.h
++++ b/VTK/Common/Core/vtkGenericDataArrayLookupHelper.h
+@@ -25,6 +25,7 @@
+ #include "vtkIdList.h"
+ #include <algorithm>
+ #include <cmath>
++#include <limits>
+ #include <unordered_map>
+ #include <vector>
+ 

diff --git a/sci-visualization/paraview/paraview-5.9.0.ebuild b/sci-visualization/paraview/paraview-5.9.0.ebuild
index 826f9ea31de..f91083500a2 100644
--- a/sci-visualization/paraview/paraview-5.9.0.ebuild
+++ b/sci-visualization/paraview/paraview-5.9.0.ebuild
@@ -105,6 +105,7 @@ S="${WORKDIR}/${MY_P}"
 PATCHES=(
 	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
 	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
+	"${FILESDIR}"/${PN}-5.9.0-gcc11-include.patch
 )
 
 pkg_setup() {


^ permalink raw reply related	[flat|nested] 10+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/
@ 2024-11-25 15:32 Andreas Sturmlechner
  0 siblings, 0 replies; 10+ messages in thread
From: Andreas Sturmlechner @ 2024-11-25 15:32 UTC (permalink / raw
  To: gentoo-commits

commit:     123583002cc10c00a78b02a91842383551932353
Author:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Sat Nov 23 14:03:21 2024 +0000
Commit:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Mon Nov 25 15:29:59 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=12358300

sci-visualization/paraview: drop 5.11.1-r1, 5.12.0_rc1-r1, 5.12.0

Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>

 sci-visualization/paraview/Manifest                |   3 -
 .../files/paraview-5.11.1-missing-include.patch    |  11 -
 .../paraview/paraview-5.11.1-r1.ebuild             | 244 --------------------
 sci-visualization/paraview/paraview-5.12.0.ebuild  | 245 ---------------------
 .../paraview/paraview-5.12.0_rc1-r1.ebuild         | 245 ---------------------
 5 files changed, 748 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 686959491eb6..66c6e2c1c909 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,4 +1 @@
-DIST ParaView-v5.11.1.tar.xz 79847556 BLAKE2B efef5e519a82ef1c0a7d532578778f6a95f07ebd72ebefd0cbdcff0bfc3af1773601cd102ff81f45f302fcaa4bb6ec7ee68f7dec77f5d4e137c2842fbbb54e11 SHA512 d0e666b49f49e41dba23e23d454a9462f018bd6d832628b0029e8d54760f0439ca97841a26da3126c5144780fc01dc25234a6624fb35346a98d35cbe0e0c98ca
-DIST ParaView-v5.12.0-RC1.tar.xz 128908020 BLAKE2B 3222ac21f733559b9f5c7e8c1009a19c0e462e2622805db7d61b683f25d70fc40cf096d699afde6dab9e23c102e3df9251a718d3ecbaac7a56db01c898270cd9 SHA512 1c6a052081e274a120563c5ffc73dadf4e02be237cc0c213a22d0b93a9865713c83992a3fc0cc1c52742b0753546b5b983a3f650989e8a472ac2f7e90383de92
-DIST ParaView-v5.12.0.tar.xz 129439820 BLAKE2B b9a59c22d15ee1582704c7e6c70a259d8b8df5d0f59fb87902ade07bce3ef7b52b055d75bb0876b7a0a9b493a7ef8df377f0ac281c370c72d9b89418efec9657 SHA512 d7ad95105f43672c5f0001f673977b7742cca113b78b0d953f4c55f60a6cf72b8a216515136251f63b8294becb0ea717b5118bf48b78ca8db85949a1b59892c1
 DIST ParaView-v5.13.0.tar.xz 133195632 BLAKE2B f4e639d01667dfb7ad02fa51133b1e2d29429aefa89e7f77772d0080aa537d910f9b6f7868e4a31d52b392762c38d94ec228b2a754936409077eb2f8ffcf7f1c SHA512 ba0051902efb2a9c599e500f85f9b20bc46eead1e1f68daa0fea0295ee606844fb72fb8eee04f67f7cced3a35be2b2b442c6f1160fc4f2c2eedfbe9c440b5b1f

diff --git a/sci-visualization/paraview/files/paraview-5.11.1-missing-include.patch b/sci-visualization/paraview/files/paraview-5.11.1-missing-include.patch
deleted file mode 100644
index d59d78412750..000000000000
--- a/sci-visualization/paraview/files/paraview-5.11.1-missing-include.patch
+++ /dev/null
@@ -1,11 +0,0 @@
-diff -urNp ParaView-v5.11.1-orig/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp ParaView-v5.11.1-dwok/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp
---- ParaView-v5.11.1-orig/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp	2023-03-30 16:08:08.000000000 +0200
-+++ ParaView-v5.11.1-dwok/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp	2023-08-26 14:53:20.211944383 +0200
-@@ -33,6 +33,7 @@
- 
- #include <vector>
- #include <string>
-+#include <cstdint>
- 
- #define CPL_DLL
- 

diff --git a/sci-visualization/paraview/paraview-5.11.1-r1.ebuild b/sci-visualization/paraview/paraview-5.11.1-r1.ebuild
deleted file mode 100644
index 111639407469..000000000000
--- a/sci-visualization/paraview/paraview-5.11.1-r1.ebuild
+++ /dev/null
@@ -1,244 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..11} )
-DOCS_BUILDER="doxygen"
-inherit cmake flag-o-matic desktop docs python-single-r1 qmake-utils toolchain-funcs xdg
-
-MAJOR_PV="$(ver_cut 1-2)"
-MINOR_PV="$(ver_cut 3)"
-RC_PV="$(ver_cut 4-5)"
-RC_PV="${RC_PV:+-${RC_PV^^}}"
-MY_P="ParaView-v${MAJOR_PV}.${MINOR_PV}${RC_PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.xz"
-S="${WORKDIR}/${MY_P}"
-
-# TODO: check licenses of plugins (USE=plugins)
-LICENSE="BSD MIT PSF-2 VTK"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="boost cg examples ffmpeg mpi nvcontrol openmp offscreen plugins python +qt5 +sqlite test tk +webengine"
-
-RESTRICT="mirror test"
-
-REQUIRED_USE="
-	python? ( mpi ${PYTHON_REQUIRED_USE} )
-	webengine? ( qt5 )
-	qt5? ( sqlite )
-	?? ( offscreen qt5 )"
-
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp:=
-	dev-libs/libxml2:2
-	dev-libs/protobuf:=
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:=
-	sci-libs/cgnslib
-	sci-libs/hdf5:=[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	media-libs/libjpeg-turbo:=
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	ffmpeg? ( media-video/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
-	!offscreen? ( virtual/opengl )
-	python? (
-		${PYTHON_DEPS}
-		$(python_gen_cond_dep '
-			dev-python/constantly[${PYTHON_USEDEP}]
-			dev-python/incremental[${PYTHON_USEDEP}]
-			dev-python/matplotlib[${PYTHON_USEDEP}]
-			dev-python/numpy[${PYTHON_USEDEP}]
-			dev-python/pygments[${PYTHON_USEDEP}]
-			dev-python/sip:5[${PYTHON_USEDEP}]
-			dev-python/six[${PYTHON_USEDEP}]
-			dev-python/twisted[${PYTHON_USEDEP}]
-			dev-python/zope-interface[${PYTHON_USEDEP}]
-			mpi? ( dev-python/mpi4py )
-			qt5? ( dev-python/pyqt5[opengl,${PYTHON_USEDEP}] )
-		')
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtdeclarative:5
-		dev-qt/qtgui:5[-gles2-only]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2-only]
-		dev-qt/qtsql:5
-		dev-qt/qtsvg:5
-		dev-qt/qttest:5
-		dev-qt/qtx11extras:5
-		dev-qt/qtxmlpatterns:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tk? ( dev-lang/tk:0= )
-	webengine? ( dev-qt/qtwebengine:5[widgets] )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? (
-		$(python_gen_cond_dep '
-			dev-libs/boost[mpi?,python,${PYTHON_USEDEP}]
-		')
-	)
-"
-
-BDEPEND="
-	openmp? ( virtual/fortran )
-"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-	"${FILESDIR}"/${P}-missing-include.patch
-)
-
-# false positive when checking for available HDF5 interface, bug #904731
-QA_CONFIG_IMPL_DECL_SKIP=(
-	H5Pset_coll_metadata_write
-	H5Pset_all_coll_metadata_ops
-)
-
-pkg_pretend() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-	use python && python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		Remoting/Application/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	# Needed to compile bundled VTK in ParaView 5.11.1 with gcc 12
-	# see also, bug #863299
-	filter-lto
-	append-cflags $(test-flags-CC -fno-strict-aliasing \
-		-Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion)
-	append-cxxflags $(test-flags-CXX -fno-strict-aliasing \
-		-Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion)
-
-	# Make sure qmlplugindump is in path:
-	export PATH="$(qt5_get_bindir):${PATH}"
-
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-UBUILD_SHARED_LIBS
-		-DPARAVIEW_BUILD_SHARED_LIBS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-
-		# boost
-		-DVTK_MODULE_ENABLE_VTK_IOInfovis="$(usex boost YES NO)"
-
-		# doc
-		-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION="$(usex doc)"
-
-		# examples
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		# ffmpeg
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-
-		# mpi
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-		-DVTK_GROUP_ENABLE_MPI="$(usex mpi YES NO)"
-
-		# offscreen
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-
-		# plugins
-		-DPARAVIEW_PLUGINS_DEFAULT="$(usex plugins)"
-
-		# python
-		-DModule_pqPython="$(usex python)"
-		-DPARAVIEW_USE_PYTHON="$(usex python)"
-
-		# qt5
-		-DPARAVIEW_USE_QT="$(usex qt5)"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-		-DVTK_GROUP_ENABLE_Qt="$(usex qt5 YES NO)"
-		-DCMAKE_INSTALL_QMLDIR="${EPREFIX}/usr/$(get_libdir)/qt5/qml"
-
-		# sqlite
-		-DVTK_MODULE_ENABLE_VTK_sqlite="$(usex sqlite YES NO)"
-
-		# test
-		-DBUILD_TESTING="$(usex test)"
-
-		# tk
-		-DVTK_USE_TK="$(usex tk)"
-		-DVTK_GROUP_ENABLE_Tk="$(usex tk YES NO)"
-
-		# webengine
-		-DPARAVIEW_USE_QTWEBENGINE="$(usex webengine)"
-		-DVTK_GROUP_ENABLE_Web="$(usex webengine YES NO)"
-	)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use qt5; then
-		mycmakeargs+=(
-			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
-			-Dqt_xmlpatterns_executable="$(qt5_get_bindir)/xmlpatterns"
-		)
-	fi
-
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# remove wrapper binaries and put the actual executable in place
-	for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-		if [ -f "${ED}"/usr/lib/"$i" ]; then
-			mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-		fi
-	done
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-	doenvd "${T}"/40${PN}
-
-	newicon "${S}"/Clients/ParaView/pvIcon-96x96.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${ED}/usr/$(get_libdir)/${PN}-${MAJOR_PV}"
-}

diff --git a/sci-visualization/paraview/paraview-5.12.0.ebuild b/sci-visualization/paraview/paraview-5.12.0.ebuild
deleted file mode 100644
index 08dae57f667a..000000000000
--- a/sci-visualization/paraview/paraview-5.12.0.ebuild
+++ /dev/null
@@ -1,245 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..12} )
-DOCS_BUILDER="doxygen"
-inherit cmake flag-o-matic desktop docs python-single-r1 qmake-utils toolchain-funcs xdg
-
-MAJOR_PV="$(ver_cut 1-2)"
-MINOR_PV="$(ver_cut 3)"
-RC_PV="$(ver_cut 4-5)"
-RC_PV="${RC_PV:+-${RC_PV^^}}"
-MY_P="ParaView-v${MAJOR_PV}.${MINOR_PV}${RC_PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.xz"
-S="${WORKDIR}/${MY_P}"
-
-# TODO: check licenses of plugins (USE=plugins)
-LICENSE="BSD MIT PSF-2 VTK"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="boost cg examples ffmpeg mpi nvcontrol openmp offscreen plugins python +qt5 +sqlite test tk +webengine"
-
-RESTRICT="mirror test"
-
-REQUIRED_USE="
-	python? ( mpi ${PYTHON_REQUIRED_USE} )
-	webengine? ( qt5 )
-	qt5? ( sqlite )
-	?? ( offscreen qt5 )"
-
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp:=
-	dev-libs/libxml2:2
-	dev-libs/protobuf:=
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:=
-	sci-libs/cgnslib
-	sci-libs/hdf5:=[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	media-libs/libjpeg-turbo:=
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	ffmpeg? ( media-video/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
-	!offscreen? ( virtual/opengl )
-	python? (
-		${PYTHON_DEPS}
-		$(python_gen_cond_dep '
-			dev-python/constantly[${PYTHON_USEDEP}]
-			dev-python/incremental[${PYTHON_USEDEP}]
-			dev-python/matplotlib[${PYTHON_USEDEP}]
-			dev-python/numpy[${PYTHON_USEDEP}]
-			dev-python/pygments[${PYTHON_USEDEP}]
-			dev-python/sip:5[${PYTHON_USEDEP}]
-			dev-python/six[${PYTHON_USEDEP}]
-			dev-python/twisted[${PYTHON_USEDEP}]
-			dev-python/zope-interface[${PYTHON_USEDEP}]
-			mpi? ( dev-python/mpi4py )
-			qt5? ( dev-python/pyqt5[opengl,${PYTHON_USEDEP}] )
-		')
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtdeclarative:5
-		dev-qt/qtgui:5[-gles2-only]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2-only]
-		dev-qt/qtsql:5
-		dev-qt/qtsvg:5
-		dev-qt/qttest:5
-		dev-qt/qtx11extras:5
-		dev-qt/qtxmlpatterns:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tk? ( dev-lang/tk:0= )
-	webengine? ( dev-qt/qtwebengine:5[widgets] )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? (
-		$(python_gen_cond_dep '
-			dev-libs/boost[mpi?,python,${PYTHON_USEDEP}]
-		')
-	)
-"
-
-BDEPEND="
-	openmp? ( virtual/fortran )
-"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-)
-
-# false positive when checking for available HDF5 interface, bug #904731
-QA_CONFIG_IMPL_DECL_SKIP=(
-	H5Pset_coll_metadata_write
-	H5Pset_all_coll_metadata_ops
-)
-
-pkg_pretend() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-	use python && python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		Remoting/Application/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	# Needed to compile bundled VTK in ParaView 5.11.1 with gcc 12
-	# see also, bug #863299
-	filter-lto
-	append-cflags $(test-flags-CC -fno-strict-aliasing \
-		-Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion)
-	append-cxxflags $(test-flags-CXX -fno-strict-aliasing \
-		-Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion)
-
-	# Make sure qmlplugindump is in path:
-	export PATH="$(qt5_get_bindir):${PATH}"
-
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-UBUILD_SHARED_LIBS
-		-DPARAVIEW_BUILD_SHARED_LIBS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-
-		# boost
-		-DVTK_MODULE_ENABLE_VTK_IOInfovis="$(usex boost YES NO)"
-
-		# doc
-		-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION="$(usex doc)"
-
-		# examples
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		# ffmpeg
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-
-		# mpi
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-		-DVTK_GROUP_ENABLE_MPI="$(usex mpi YES NO)"
-
-		# offscreen
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-
-		# plugins
-		-DPARAVIEW_PLUGINS_DEFAULT="$(usex plugins)"
-
-		# python
-		-DModule_pqPython="$(usex python)"
-		-DPARAVIEW_USE_PYTHON="$(usex python)"
-
-		# qt5
-		-DPARAVIEW_USE_QT="$(usex qt5)"
-		-DPARAVIEW_QT_VERSION="5"
-		-DVTK_QT_VERSION="5"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-		-DVTK_GROUP_ENABLE_Qt="$(usex qt5 YES NO)"
-		-DCMAKE_INSTALL_QMLDIR="${EPREFIX}/usr/$(get_libdir)/qt5/qml"
-
-		# sqlite
-		-DVTK_MODULE_ENABLE_VTK_sqlite="$(usex sqlite YES NO)"
-
-		# test
-		-DBUILD_TESTING="$(usex test)"
-
-		# tk
-		-DVTK_USE_TK="$(usex tk)"
-		-DVTK_GROUP_ENABLE_Tk="$(usex tk YES NO)"
-
-		# webengine
-		-DPARAVIEW_USE_QTWEBENGINE="$(usex webengine)"
-		-DVTK_GROUP_ENABLE_Web="$(usex webengine YES NO)"
-	)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use qt5; then
-		mycmakeargs+=(
-			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
-			-Dqt_xmlpatterns_executable="$(qt5_get_bindir)/xmlpatterns"
-		)
-	fi
-
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# remove wrapper binaries and put the actual executable in place
-	for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-		if [ -f "${ED}"/usr/lib/"$i" ]; then
-			mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-		fi
-	done
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-	doenvd "${T}"/40${PN}
-
-	newicon "${S}"/Clients/ParaView/pvIcon-96x96.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${ED}/usr/$(get_libdir)/${PN}-${MAJOR_PV}"
-}

diff --git a/sci-visualization/paraview/paraview-5.12.0_rc1-r1.ebuild b/sci-visualization/paraview/paraview-5.12.0_rc1-r1.ebuild
deleted file mode 100644
index 11313384200a..000000000000
--- a/sci-visualization/paraview/paraview-5.12.0_rc1-r1.ebuild
+++ /dev/null
@@ -1,245 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..11} )
-DOCS_BUILDER="doxygen"
-inherit cmake flag-o-matic desktop docs python-single-r1 qmake-utils toolchain-funcs xdg
-
-MAJOR_PV="$(ver_cut 1-2)"
-MINOR_PV="$(ver_cut 3)"
-RC_PV="$(ver_cut 4-5)"
-RC_PV="${RC_PV:+-${RC_PV^^}}"
-MY_P="ParaView-v${MAJOR_PV}.${MINOR_PV}${RC_PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.xz"
-S="${WORKDIR}/${MY_P}"
-
-# TODO: check licenses of plugins (USE=plugins)
-LICENSE="BSD MIT PSF-2 VTK"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="boost cg examples ffmpeg mpi nvcontrol openmp offscreen plugins python +qt5 +sqlite test tk +webengine"
-
-RESTRICT="mirror test"
-
-REQUIRED_USE="
-	python? ( mpi ${PYTHON_REQUIRED_USE} )
-	webengine? ( qt5 )
-	qt5? ( sqlite )
-	?? ( offscreen qt5 )"
-
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp:=
-	dev-libs/libxml2:2
-	dev-libs/protobuf:=
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:=
-	sci-libs/cgnslib
-	sci-libs/hdf5:=[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	media-libs/libjpeg-turbo:=
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	ffmpeg? ( media-video/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
-	!offscreen? ( virtual/opengl )
-	python? (
-		${PYTHON_DEPS}
-		$(python_gen_cond_dep '
-			dev-python/constantly[${PYTHON_USEDEP}]
-			dev-python/incremental[${PYTHON_USEDEP}]
-			dev-python/matplotlib[${PYTHON_USEDEP}]
-			dev-python/numpy[${PYTHON_USEDEP}]
-			dev-python/pygments[${PYTHON_USEDEP}]
-			dev-python/sip:5[${PYTHON_USEDEP}]
-			dev-python/six[${PYTHON_USEDEP}]
-			dev-python/twisted[${PYTHON_USEDEP}]
-			dev-python/zope-interface[${PYTHON_USEDEP}]
-			mpi? ( dev-python/mpi4py )
-			qt5? ( dev-python/pyqt5[opengl,${PYTHON_USEDEP}] )
-		')
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtdeclarative:5
-		dev-qt/qtgui:5[-gles2-only]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2-only]
-		dev-qt/qtsql:5
-		dev-qt/qtsvg:5
-		dev-qt/qttest:5
-		dev-qt/qtx11extras:5
-		dev-qt/qtxmlpatterns:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tk? ( dev-lang/tk:0= )
-	webengine? ( dev-qt/qtwebengine:5[widgets] )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? (
-		$(python_gen_cond_dep '
-			dev-libs/boost[mpi?,python,${PYTHON_USEDEP}]
-		')
-	)
-"
-
-BDEPEND="
-	openmp? ( virtual/fortran )
-"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-)
-
-# false positive when checking for available HDF5 interface, bug #904731
-QA_CONFIG_IMPL_DECL_SKIP=(
-	H5Pset_coll_metadata_write
-	H5Pset_all_coll_metadata_ops
-)
-
-pkg_pretend() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-	use python && python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		Remoting/Application/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	# Needed to compile bundled VTK in ParaView 5.11.1 with gcc 12
-	# see also, bug #863299
-	filter-lto
-	append-cflags $(test-flags-CC -fno-strict-aliasing \
-		-Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion)
-	append-cxxflags $(test-flags-CXX -fno-strict-aliasing \
-		-Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion)
-
-	# Make sure qmlplugindump is in path:
-	export PATH="$(qt5_get_bindir):${PATH}"
-
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-UBUILD_SHARED_LIBS
-		-DPARAVIEW_BUILD_SHARED_LIBS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-
-		# boost
-		-DVTK_MODULE_ENABLE_VTK_IOInfovis="$(usex boost YES NO)"
-
-		# doc
-		-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION="$(usex doc)"
-
-		# examples
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		# ffmpeg
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-
-		# mpi
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-		-DVTK_GROUP_ENABLE_MPI="$(usex mpi YES NO)"
-
-		# offscreen
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-
-		# plugins
-		-DPARAVIEW_PLUGINS_DEFAULT="$(usex plugins)"
-
-		# python
-		-DModule_pqPython="$(usex python)"
-		-DPARAVIEW_USE_PYTHON="$(usex python)"
-
-		# qt5
-		-DPARAVIEW_USE_QT="$(usex qt5)"
-		-DPARAVIEW_QT_VERSION="5"
-		-DVTK_QT_VERSION="5"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-		-DVTK_GROUP_ENABLE_Qt="$(usex qt5 YES NO)"
-		-DCMAKE_INSTALL_QMLDIR="${EPREFIX}/usr/$(get_libdir)/qt5/qml"
-
-		# sqlite
-		-DVTK_MODULE_ENABLE_VTK_sqlite="$(usex sqlite YES NO)"
-
-		# test
-		-DBUILD_TESTING="$(usex test)"
-
-		# tk
-		-DVTK_USE_TK="$(usex tk)"
-		-DVTK_GROUP_ENABLE_Tk="$(usex tk YES NO)"
-
-		# webengine
-		-DPARAVIEW_USE_QTWEBENGINE="$(usex webengine)"
-		-DVTK_GROUP_ENABLE_Web="$(usex webengine YES NO)"
-	)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use qt5; then
-		mycmakeargs+=(
-			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
-			-Dqt_xmlpatterns_executable="$(qt5_get_bindir)/xmlpatterns"
-		)
-	fi
-
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# remove wrapper binaries and put the actual executable in place
-	for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-		if [ -f "${ED}"/usr/lib/"$i" ]; then
-			mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-		fi
-	done
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-	doenvd "${T}"/40${PN}
-
-	newicon "${S}"/Clients/ParaView/pvIcon-96x96.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${ED}/usr/$(get_libdir)/${PN}-${MAJOR_PV}"
-}


^ permalink raw reply related	[flat|nested] 10+ messages in thread

end of thread, other threads:[~2024-11-25 15:32 UTC | newest]

Thread overview: 10+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2015-09-20  3:04 [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/, sci-visualization/paraview/files/ Matthias Maier
  -- strict thread matches above, loose matches on Subject: below --
2024-11-25 15:32 Andreas Sturmlechner
2021-05-11 18:26 Sam James
2020-07-02  0:03 Andreas Sturmlechner
2018-04-01 20:42 Matthias Maier
2017-05-31 21:14 Matthias Maier
2016-09-22 12:59 Matthias Maier
2016-07-11 10:37 Matthias Maier
2016-07-09 20:04 Matthias Maier
2015-09-20  3:04 Matthias Maier

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox