* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2015-09-13 18:34 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-09-13 18:34 UTC (permalink / raw
To: gentoo-commits
commit: dbdead3cd3bf90ddada5b8e50d0b58596763d298
Author: layman <layman <AT> localhost>
AuthorDate: Sat Sep 12 22:49:54 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Sep 12 22:57:31 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=dbdead3c
sci-libs/rdkit: initial commit
Package-Manager: portage-2.2.20-prefix
sci-libs/rdkit/ChangeLog | 10 ++++++++
sci-libs/rdkit/metadata.xml | 12 +++++++++
sci-libs/rdkit/rdkit-2015.03.1.ebuild | 47 +++++++++++++++++++++++++++++++++++
sci-libs/rdkit/rdkit-9999.ebuild | 46 ++++++++++++++++++++++++++++++++++
4 files changed, 115 insertions(+)
diff --git a/sci-libs/rdkit/ChangeLog b/sci-libs/rdkit/ChangeLog
new file mode 100644
index 0000000..8a83ba7
--- /dev/null
+++ b/sci-libs/rdkit/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-libs/rdkit
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Id$
+
+*rdkit-2015.03.1 (12 Sep 2015)
+*rdkit-9999 (12 Sep 2015)
+
+ 12 Sep 2015; Michael Schubert <mschu.dev@gmail.com> +metadata.xml,
+ +rdkit-2015.03.1.ebuild, +rdkit-9999.ebuild:
+ sci-libs/rdkit: initial commit
diff --git a/sci-libs/rdkit/metadata.xml b/sci-libs/rdkit/metadata.xml
new file mode 100644
index 0000000..cfa0f50
--- /dev/null
+++ b/sci-libs/rdkit/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-chemistry</herd>
+ <maintainer>
+ <email>mschu.dev@gmail.com</email>
+ <name>Michael Schubert</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">rdkit/rdkit</remote-id>
+ </upstream>
+</pkgmetadata>
diff --git a/sci-libs/rdkit/rdkit-2015.03.1.ebuild b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
new file mode 100644
index 0000000..e98b017
--- /dev/null
+++ b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
@@ -0,0 +1,47 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python{2_7,3_3,3_4} )
+
+inherit cmake-utils python-r1
+
+DESCRIPTION="Cheminformatics and machine-learning software written in C++ and Python"
+HOMEPAGE="http://www.rdkit.org/"
+SRC_URI="https://github.com/rdkit/rdkit/archive/Release_${PV//./_}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="+python -static-libs"
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
+
+RDEPEND="dev-libs/boost
+ python? (
+ dev-libs/boost[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ )
+ >=dev-db/sqlite-3"
+DEPEND="${RDEPEND}"
+
+S="${WORKDIR}"/rdkit-Release_${PV//./_}
+
+src_configure() {
+ local mycmakeargs=(
+ -DCMAKE_INSTALL_PREFIX:PATH="${EPREFIX}"/usr
+ -DRDK_INSTALL_INTREE=0
+ -DRDK_BUILD_CPP_TESTS=OFF
+ )
+
+ if ! use static-libs; then
+ mycmakeargs+=( -DRDK_INSTALL_STATIC_LIBS=OFF )
+ fi
+
+ if ! use python; then
+ mycmakeargs+=( RDK_BUILD_PYTHON_WRAPPERS= )
+ fi
+
+ cmake-utils_src_configure
+}
diff --git a/sci-libs/rdkit/rdkit-9999.ebuild b/sci-libs/rdkit/rdkit-9999.ebuild
new file mode 100644
index 0000000..dfa196f
--- /dev/null
+++ b/sci-libs/rdkit/rdkit-9999.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python{2_7,3_3,3_4} )
+
+inherit cmake-utils python-r1 git-r3
+
+DESCRIPTION="Cheminformatics and machine-learning software written in C++ and Python"
+HOMEPAGE="http://www.rdkit.org/"
+SRC_URI=""
+EGIT_REPO_URI="https://github.com/rdkit/rdkit.git"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="+python -static-libs"
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
+
+RDEPEND="dev-libs/boost
+ python? (
+ dev-libs/boost[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ )
+ >=dev-db/sqlite-3"
+DEPEND="${RDEPEND}"
+
+src_configure() {
+ local mycmakeargs=(
+ -DCMAKE_INSTALL_PREFIX:PATH="${EPREFIX}"/usr
+ -DRDK_INSTALL_INTREE=0
+ -DRDK_BUILD_CPP_TESTS=OFF
+ )
+
+ if ! use static-libs; then
+ mycmakeargs+=( -DRDK_INSTALL_STATIC_LIBS=OFF )
+ fi
+
+ if ! use python; then
+ mycmakeargs+=( RDK_BUILD_PYTHON_WRAPPERS= )
+ fi
+
+ cmake-utils_src_configure
+}
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2015-09-13 18:34 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-09-13 18:34 UTC (permalink / raw
To: gentoo-commits
commit: ed8fb25203c90f2049a41a421c54713641f7cd66
Author: Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
AuthorDate: Sun Sep 13 08:40:13 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Sep 13 08:40:13 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ed8fb252
sci-libs/rdkit: Fix cmake args
Package-Manager: portage-2.2.20.1
sci-libs/rdkit/ChangeLog | 4 ++++
sci-libs/rdkit/rdkit-2015.03.1.ebuild | 2 +-
sci-libs/rdkit/rdkit-9999.ebuild | 2 +-
3 files changed, 6 insertions(+), 2 deletions(-)
diff --git a/sci-libs/rdkit/ChangeLog b/sci-libs/rdkit/ChangeLog
index 8a83ba7..2c1da33 100644
--- a/sci-libs/rdkit/ChangeLog
+++ b/sci-libs/rdkit/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Id$
+ 13 Sep 2015; Marius Brehler <marbre@linux.sungazer.de> rdkit-2015.03.1.ebuild,
+ rdkit-9999.ebuild:
+ sci-libs/rdkit: Fix cmake args
+
*rdkit-2015.03.1 (12 Sep 2015)
*rdkit-9999 (12 Sep 2015)
diff --git a/sci-libs/rdkit/rdkit-2015.03.1.ebuild b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
index e98b017..fed972a 100644
--- a/sci-libs/rdkit/rdkit-2015.03.1.ebuild
+++ b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
@@ -40,7 +40,7 @@ src_configure() {
fi
if ! use python; then
- mycmakeargs+=( RDK_BUILD_PYTHON_WRAPPERS= )
+ mycmakeargs+=( -DRDK_BUILD_PYTHON_WRAPPERS=OFF )
fi
cmake-utils_src_configure
diff --git a/sci-libs/rdkit/rdkit-9999.ebuild b/sci-libs/rdkit/rdkit-9999.ebuild
index dfa196f..d61982e 100644
--- a/sci-libs/rdkit/rdkit-9999.ebuild
+++ b/sci-libs/rdkit/rdkit-9999.ebuild
@@ -39,7 +39,7 @@ src_configure() {
fi
if ! use python; then
- mycmakeargs+=( RDK_BUILD_PYTHON_WRAPPERS= )
+ mycmakeargs+=( -DRDK_BUILD_PYTHON_WRAPPERS=OFF )
fi
cmake-utils_src_configure
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2015-09-13 18:34 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-09-13 18:34 UTC (permalink / raw
To: gentoo-commits
commit: 313b01351deeddc59f17cdfd2f95fd0572b99348
Author: mschubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Sun Sep 13 14:27:10 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Sep 13 14:27:10 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=313b0135
sci-libs/rdkit: simplify USE checks
Package-Manager: portage-2.2.20-prefix
sci-libs/rdkit/ChangeLog | 4 ++++
sci-libs/rdkit/rdkit-2015.03.1.ebuild | 10 ++--------
sci-libs/rdkit/rdkit-9999.ebuild | 10 ++--------
3 files changed, 8 insertions(+), 16 deletions(-)
diff --git a/sci-libs/rdkit/ChangeLog b/sci-libs/rdkit/ChangeLog
index 2c1da33..e5b9ddb 100644
--- a/sci-libs/rdkit/ChangeLog
+++ b/sci-libs/rdkit/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Id$
+ 13 Sep 2015; Michael Schubert <mschu.dev@gmail.com> rdkit-2015.03.1.ebuild,
+ rdkit-9999.ebuild:
+ sci-libs/rdkit: simplify USE checks
+
13 Sep 2015; Marius Brehler <marbre@linux.sungazer.de> rdkit-2015.03.1.ebuild,
rdkit-9999.ebuild:
sci-libs/rdkit: Fix cmake args
diff --git a/sci-libs/rdkit/rdkit-2015.03.1.ebuild b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
index fed972a..68ee45f 100644
--- a/sci-libs/rdkit/rdkit-2015.03.1.ebuild
+++ b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
@@ -33,15 +33,9 @@ src_configure() {
-DCMAKE_INSTALL_PREFIX:PATH="${EPREFIX}"/usr
-DRDK_INSTALL_INTREE=0
-DRDK_BUILD_CPP_TESTS=OFF
+ $(cmake-utils_use static-libs RDK_INSTALL_STATIC_LIBS)
+ $(cmake-utils_use python RDK_BUILD_PYTHON_WRAPPERS)
)
- if ! use static-libs; then
- mycmakeargs+=( -DRDK_INSTALL_STATIC_LIBS=OFF )
- fi
-
- if ! use python; then
- mycmakeargs+=( -DRDK_BUILD_PYTHON_WRAPPERS=OFF )
- fi
-
cmake-utils_src_configure
}
diff --git a/sci-libs/rdkit/rdkit-9999.ebuild b/sci-libs/rdkit/rdkit-9999.ebuild
index d61982e..0b4f40a 100644
--- a/sci-libs/rdkit/rdkit-9999.ebuild
+++ b/sci-libs/rdkit/rdkit-9999.ebuild
@@ -32,15 +32,9 @@ src_configure() {
-DCMAKE_INSTALL_PREFIX:PATH="${EPREFIX}"/usr
-DRDK_INSTALL_INTREE=0
-DRDK_BUILD_CPP_TESTS=OFF
+ $(cmake-utils_use static-libs RDK_INSTALL_STATIC_LIBS)
+ $(cmake-utils_use python RDK_BUILD_PYTHON_WRAPPERS)
)
- if ! use static-libs; then
- mycmakeargs+=( -DRDK_INSTALL_STATIC_LIBS=OFF )
- fi
-
- if ! use python; then
- mycmakeargs+=( -DRDK_BUILD_PYTHON_WRAPPERS=OFF )
- fi
-
cmake-utils_src_configure
}
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2015-11-20 11:39 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-11-20 11:39 UTC (permalink / raw
To: gentoo-commits
commit: 4f6c87e3500f9750f66edd527a2fbf8fe7ac612b
Author: Gao, Xiang <qasdfgtyuiop <AT> gmail <DOT> com>
AuthorDate: Tue Nov 17 22:18:35 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Nov 17 22:18:35 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4f6c87e3
fix dependency on python
sci-libs/rdkit/rdkit-9999.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-libs/rdkit/rdkit-9999.ebuild b/sci-libs/rdkit/rdkit-9999.ebuild
index 0b4f40a..be37c58 100644
--- a/sci-libs/rdkit/rdkit-9999.ebuild
+++ b/sci-libs/rdkit/rdkit-9999.ebuild
@@ -21,7 +21,7 @@ REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
RDEPEND="dev-libs/boost
python? (
- dev-libs/boost[${PYTHON_USEDEP}]
+ dev-libs/boost[python,${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
)
>=dev-db/sqlite-3"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2015-11-20 11:39 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-11-20 11:39 UTC (permalink / raw
To: gentoo-commits
commit: d74e903a793e3340ba471d976e135d580936ba77
Author: Gao, Xiang <qasdfgtyuiop <AT> gmail <DOT> com>
AuthorDate: Mon Nov 16 19:40:36 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Nov 16 19:40:36 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=d74e903a
fix dependency on boost[python]
rdkit should requires that boost is installed with python support.
sci-libs/rdkit/rdkit-2015.03.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-libs/rdkit/rdkit-2015.03.1.ebuild b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
index 68ee45f..21b444b 100644
--- a/sci-libs/rdkit/rdkit-2015.03.1.ebuild
+++ b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
@@ -18,7 +18,7 @@ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="+python -static-libs"
REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
-RDEPEND="dev-libs/boost
+RDEPEND="dev-libs/boost[python]
python? (
dev-libs/boost[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2015-11-20 11:39 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-11-20 11:39 UTC (permalink / raw
To: gentoo-commits
commit: d3e18a1c5c48d14f6505981961d573c4a66c6e2e
Author: Gao, Xiang <qasdfgtyuiop <AT> gmail <DOT> com>
AuthorDate: Tue Nov 17 22:17:54 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Nov 17 22:17:54 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=d3e18a1c
if rdkit don't uses python,boost won't need use
if rdkit don't uses python,boost won't need use
sci-libs/rdkit/rdkit-2015.03.1.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-libs/rdkit/rdkit-2015.03.1.ebuild b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
index 21b444b..38e30e9 100644
--- a/sci-libs/rdkit/rdkit-2015.03.1.ebuild
+++ b/sci-libs/rdkit/rdkit-2015.03.1.ebuild
@@ -18,9 +18,9 @@ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="+python -static-libs"
REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
-RDEPEND="dev-libs/boost[python]
+RDEPEND="dev-libs/boost
python? (
- dev-libs/boost[${PYTHON_USEDEP}]
+ dev-libs/boost[python,${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
)
>=dev-db/sqlite-3"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2021-01-19 16:56 Andrew Ammerlaan
0 siblings, 0 replies; 8+ messages in thread
From: Andrew Ammerlaan @ 2021-01-19 16:56 UTC (permalink / raw
To: gentoo-commits
commit: b119d7b5886177b78b9cb720aee6634196926c08
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Tue Jan 19 16:48:15 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Tue Jan 19 16:48:15 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=b119d7b5
sci-libs/rdkit: add ${PYTHON_DEPS}
Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-libs/rdkit/rdkit-2020.03.6.ebuild | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/sci-libs/rdkit/rdkit-2020.03.6.ebuild b/sci-libs/rdkit/rdkit-2020.03.6.ebuild
index 2c8ef5817..0c715da7d 100644
--- a/sci-libs/rdkit/rdkit-2020.03.6.ebuild
+++ b/sci-libs/rdkit/rdkit-2020.03.6.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -29,6 +29,7 @@ RDEPEND="dev-libs/boost
python? (
dev-libs/boost[python,${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
+ ${PYTHON_DEPS}
)
>=dev-db/sqlite-3"
DEPEND="${RDEPEND}"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-libs/rdkit/
@ 2021-08-31 9:45 Andrew Ammerlaan
0 siblings, 0 replies; 8+ messages in thread
From: Andrew Ammerlaan @ 2021-08-31 9:45 UTC (permalink / raw
To: gentoo-commits
commit: 5e23a0b948d3023eb7fa15dc8859502939ca108f
Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Tue Aug 31 09:43:21 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Tue Aug 31 09:43:21 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=5e23a0b9
sci-libs/rdkit: fix BadDefaultUseFlags
Package-Manager: Portage-3.0.22, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
sci-libs/rdkit/rdkit-2020.03.6.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-libs/rdkit/rdkit-2020.03.6.ebuild b/sci-libs/rdkit/rdkit-2020.03.6.ebuild
index c38bac753..b73817270 100644
--- a/sci-libs/rdkit/rdkit-2020.03.6.ebuild
+++ b/sci-libs/rdkit/rdkit-2020.03.6.ebuild
@@ -22,7 +22,7 @@ LICENSE="BSD"
SLOT="0"
KEYWORDS=""
# build configuration issues https://github.com/rdkit/rdkit/issues/3444
-IUSE="+python -static-libs"
+IUSE="+python static-libs"
REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
RDEPEND="dev-libs/boost
^ permalink raw reply related [flat|nested] 8+ messages in thread
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