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* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/mdanalysis/
@ 2015-09-01 20:06 Tobias Klausmann
  0 siblings, 0 replies; 17+ messages in thread
From: Tobias Klausmann @ 2015-09-01 20:06 UTC (permalink / raw
  To: gentoo-commits

commit:     e5b098f3877505ad2897a85614263511c4fc3081
Author:     Tobias Klausmann <klausman <AT> gentoo <DOT> org>
AuthorDate: Tue Sep  1 19:57:53 2015 +0000
Commit:     Tobias Klausmann <klausman <AT> gentoo <DOT> org>
CommitDate: Tue Sep  1 19:57:53 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e5b098f3

sci-chemistry/mdanalysis: Fixing HOMEPAGE move due to code.google.com shutdown

Package-Manager: portage-2.2.20.1

 sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild b/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild
index aab3656..09aa042 100644
--- a/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild
+++ b/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild
@@ -12,7 +12,7 @@ MY_PN="MDAnalysis"
 MY_P="${MY_PN}-${PV}"
 
 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
-HOMEPAGE="https://code.google.com/p/mdanalysis/"
+HOMEPAGE="http://www.mdanalysis.org/"
 SRC_URI="https://mdanalysis.googlecode.com/files/${MY_P}.tar.gz"
 
 SLOT="0"


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/mdanalysis/
@ 2018-05-16 22:57 Aaron Bauman
  0 siblings, 0 replies; 17+ messages in thread
From: Aaron Bauman @ 2018-05-16 22:57 UTC (permalink / raw
  To: gentoo-commits

commit:     a7376d65f0c6667ea04e3a8539a3358c518ac25a
Author:     Michael Mair-Keimberger <m.mairkeimberger <AT> gmail <DOT> com>
AuthorDate: Tue May 15 10:25:59 2018 +0000
Commit:     Aaron Bauman <bman <AT> gentoo <DOT> org>
CommitDate: Wed May 16 22:56:50 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a7376d65

sci-chemistry/mdanalysis: use HTTPS

 sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild b/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild
index 763061028d4..adb280c4b63 100644
--- a/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild
+++ b/sci-chemistry/mdanalysis/mdanalysis-0.7.7.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=5
@@ -11,7 +11,7 @@ MY_PN="MDAnalysis"
 MY_P="${MY_PN}-${PV}"
 
 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
-HOMEPAGE="http://www.mdanalysis.org/"
+HOMEPAGE="https://www.mdanalysis.org"
 SRC_URI="https://mdanalysis.googlecode.com/files/${MY_P}.tar.gz"
 
 SLOT="0"


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2018-06-28 12:20 Alexey Shvetsov
  0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2018-06-28 12:20 UTC (permalink / raw
  To: gentoo-commits

commit:     52b65f613d94a72a710c7f5a7efbda540516fb2e
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Thu Jun 28 12:17:31 2018 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Thu Jun 28 12:20:16 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=52b65f61

sci-chemistry/MDAnalysis: Version bump

Package-Manager: Portage-2.3.40, Repoman-2.3.9

 sci-chemistry/MDAnalysis/MDAnalysis-0.18.0.ebuild | 32 +++++++++++++++++++++++
 sci-chemistry/MDAnalysis/Manifest                 |  1 +
 sci-chemistry/MDAnalysis/metadata.xml             |  8 ++++++
 3 files changed, 41 insertions(+)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0.ebuild
new file mode 100644
index 00000000000..65fd1f237e7
--- /dev/null
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0.ebuild
@@ -0,0 +1,32 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python{2_7,3_5,3_6} )
+
+inherit distutils-r1
+
+DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
+HOMEPAGE="https://www.mdanalysis.org"
+SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz"
+
+SLOT="0"
+LICENSE="GPL-2"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="test"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	sci-biology/biopython[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/GridDataFormats[${PYTHON_USEDEP}]
+	dev-python/netcdf4-python[${PYTHON_USEDEP}]
+	dev-python/mmtf-python[${PYTHON_USEDEP}]
+	dev-python/gsd[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dev-python/duecredit[${PYTHON_USEDEP}]
+"
+DEPEND="${RDEPEND}
+	test? ( dev-python/nose[${PYTHON_USEDEP}] )"

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
new file mode 100644
index 00000000000..3f78fef8223
--- /dev/null
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -0,0 +1 @@
+DIST MDAnalysis-0.18.0.tar.gz 11085390 BLAKE2B 70b5530a0800370fbee2805d8c4cb495f2e339b29c13c0a2442e3310c1b941ccf459a19d0a490c47a28b77ffeeaca581100ef06b7196cb9fcdb1b71d5d0c871f SHA512 b235471c04ab2e117fe25e972d88a6245b1641f96d30eafd2f68949c8af8c1360eed49b1ec9960d8c386c0bbca8b3749cec322eb19f9975f15225983af0f5819

diff --git a/sci-chemistry/MDAnalysis/metadata.xml b/sci-chemistry/MDAnalysis/metadata.xml
new file mode 100644
index 00000000000..8425c0d53cb
--- /dev/null
+++ b/sci-chemistry/MDAnalysis/metadata.xml
@@ -0,0 +1,8 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="project">
+    <email>sci@gentoo.org</email>
+    <name>Gentoo Science Project</name>
+  </maintainer>
+</pkgmetadata>


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2019-11-17 15:12 Alexey Shvetsov
  0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2019-11-17 15:12 UTC (permalink / raw
  To: gentoo-commits

commit:     01df3052f505005441ca849cf0d7e47fe8d48f6a
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sun Nov 17 15:11:32 2019 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sun Nov 17 15:12:13 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=01df3052

sci-chemistry/MDAnalysis: move to py3.7 and eapi7

Package-Manager: Portage-2.3.79, Repoman-2.3.18
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>

 ...nalysis-0.18.0.ebuild => MDAnalysis-0.18.0-r1.ebuild} | 10 ++++++----
 sci-chemistry/MDAnalysis/metadata.xml                    | 16 ++++++++++++----
 2 files changed, 18 insertions(+), 8 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
similarity index 85%
rename from sci-chemistry/MDAnalysis/MDAnalysis-0.18.0.ebuild
rename to sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
index 65fd1f237e7..0e9af8987fa 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2018 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
-PYTHON_COMPAT=( python{2_7,3_5,3_6} )
+PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
 
 inherit distutils-r1
 
@@ -28,5 +28,7 @@ RDEPEND="
 	dev-python/mock[${PYTHON_USEDEP}]
 	dev-python/duecredit[${PYTHON_USEDEP}]
 "
-DEPEND="${RDEPEND}
+BDEPEND="${RDEPEND}
 	test? ( dev-python/nose[${PYTHON_USEDEP}] )"
+
+RESTRICT="!test? ( test )"

diff --git a/sci-chemistry/MDAnalysis/metadata.xml b/sci-chemistry/MDAnalysis/metadata.xml
index 8425c0d53cb..6b7aa8ce58a 100644
--- a/sci-chemistry/MDAnalysis/metadata.xml
+++ b/sci-chemistry/MDAnalysis/metadata.xml
@@ -1,8 +1,16 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-  <maintainer type="project">
-    <email>sci@gentoo.org</email>
-    <name>Gentoo Science Project</name>
-  </maintainer>
+	<maintainer type="project">
+		<email>sci@gentoo.org</email>
+		<name>Gentoo Science Project</name>
+	</maintainer>
+	<maintainer type="person">
+		<email>alexxy@gentoo.org</email>
+		<name>Alexey Shvetsov</name>
+	</maintainer>
+	<upstream>
+		<remote-id type="pypi">MDAnalysis</remote-id>
+		<remote-id type="github">MDAnalysis/MDAnalysis</remote-id>
+	</upstream>
 </pkgmetadata>


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2019-12-26 20:46 David Seifert
  0 siblings, 0 replies; 17+ messages in thread
From: David Seifert @ 2019-12-26 20:46 UTC (permalink / raw
  To: gentoo-commits

commit:     37e13bcc798fe5b8cd5d5a1335a07494db32bde2
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Thu Dec 26 20:46:37 2019 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Thu Dec 26 20:46:37 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=37e13bcc

sci-chemistry/MDAnalysis: Remove Py2

Package-Manager: Portage-2.3.83, Repoman-2.3.20
Signed-off-by: David Seifert <soap <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
index 0e9af8987fa..2a45b995a89 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=7
 
-PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
+PYTHON_COMPAT=( python3_{5,6,7} )
 
 inherit distutils-r1
 


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2021-01-12 20:25 Pacho Ramos
  0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2021-01-12 20:25 UTC (permalink / raw
  To: gentoo-commits

commit:     7325681c413ad11ed3bcfab315acf9abdd0eaded
Author:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Tue Jan 12 20:22:46 2021 +0000
Commit:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Tue Jan 12 20:22:46 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7325681c

sci-chemistry/MDAnalysis: Bump to 1.0.0

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild | 37 ++++++++++++++++++++++++
 sci-chemistry/MDAnalysis/Manifest                |  1 +
 2 files changed, 38 insertions(+)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
new file mode 100644
index 00000000000..bf88aac4720
--- /dev/null
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..9} )
+
+inherit distutils-r1
+
+DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
+HOMEPAGE="https://www.mdanalysis.org"
+SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz"
+
+SLOT="0"
+LICENSE="GPL-2"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="test"
+
+RDEPEND="
+	>=dev-python/numpy-1.13.3[${PYTHON_USEDEP}]
+	>=dev-python/scipy-1.0.0[${PYTHON_USEDEP}]
+	>=sci-biology/biopython-1.71[${PYTHON_USEDEP}]
+	>=dev-python/networkx-1.0[${PYTHON_USEDEP}]
+	>=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}]
+	>=dev-python/joblib-0.12[${PYTHON_USEDEP}]
+	>=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}]
+	dev-python/netcdf4-python[${PYTHON_USEDEP}]
+	>=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}]
+	>=dev-python/gsd-1.9.3[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dev-python/duecredit[${PYTHON_USEDEP}]
+	>=dev-python/six-1.4.0[${PYTHON_USEDEP}]
+	>=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}]
+"
+BDEPEND="${RDEPEND}"
+
+distutils_enable_tests nose

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index 3f78fef8223..2936149307d 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1 +1,2 @@
 DIST MDAnalysis-0.18.0.tar.gz 11085390 BLAKE2B 70b5530a0800370fbee2805d8c4cb495f2e339b29c13c0a2442e3310c1b941ccf459a19d0a490c47a28b77ffeeaca581100ef06b7196cb9fcdb1b71d5d0c871f SHA512 b235471c04ab2e117fe25e972d88a6245b1641f96d30eafd2f68949c8af8c1360eed49b1ec9960d8c386c0bbca8b3749cec322eb19f9975f15225983af0f5819
+DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2021-01-18 10:14 David Seifert
  0 siblings, 0 replies; 17+ messages in thread
From: David Seifert @ 2021-01-18 10:14 UTC (permalink / raw
  To: gentoo-commits

commit:     aa90b8ac893c274dfdea2b0706dc7a8476d39974
Author:     Jakov Smolic <jakov.smolic <AT> sartura <DOT> hr>
AuthorDate: Mon Jan 18 10:14:10 2021 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Mon Jan 18 10:14:10 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=aa90b8ac

sci-chemistry/MDAnalysis: Remove old

Signed-off-by: Jakov Smolic <jakov.smolic <AT> sartura.hr>
Signed-off-by: David Seifert <soap <AT> gentoo.org>

 .../MDAnalysis/MDAnalysis-0.18.0-r1.ebuild         | 34 ----------------------
 sci-chemistry/MDAnalysis/Manifest                  |  1 -
 2 files changed, 35 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
deleted file mode 100644
index 688fa93d394..00000000000
--- a/sci-chemistry/MDAnalysis/MDAnalysis-0.18.0-r1.ebuild
+++ /dev/null
@@ -1,34 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{6,7} )
-
-inherit distutils-r1
-
-DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
-HOMEPAGE="https://www.mdanalysis.org"
-SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz"
-
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="test"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	sci-biology/biopython[${PYTHON_USEDEP}]
-	dev-python/networkx[${PYTHON_USEDEP}]
-	dev-python/GridDataFormats[${PYTHON_USEDEP}]
-	dev-python/netcdf4-python[${PYTHON_USEDEP}]
-	dev-python/mmtf-python[${PYTHON_USEDEP}]
-	dev-python/gsd[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dev-python/duecredit[${PYTHON_USEDEP}]
-"
-BDEPEND="${RDEPEND}
-	test? ( dev-python/nose[${PYTHON_USEDEP}] )"
-
-RESTRICT="!test? ( test )"

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index 2936149307d..5a903a9f3b7 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1,2 +1 @@
-DIST MDAnalysis-0.18.0.tar.gz 11085390 BLAKE2B 70b5530a0800370fbee2805d8c4cb495f2e339b29c13c0a2442e3310c1b941ccf459a19d0a490c47a28b77ffeeaca581100ef06b7196cb9fcdb1b71d5d0c871f SHA512 b235471c04ab2e117fe25e972d88a6245b1641f96d30eafd2f68949c8af8c1360eed49b1ec9960d8c386c0bbca8b3749cec322eb19f9975f15225983af0f5819
 DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2021-12-28 14:15 Andrew Ammerlaan
  0 siblings, 0 replies; 17+ messages in thread
From: Andrew Ammerlaan @ 2021-12-28 14:15 UTC (permalink / raw
  To: gentoo-commits

commit:     92f34d724c7f8432501c18805fbab24a33e8122a
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Tue Dec 28 13:59:50 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Tue Dec 28 14:15:01 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=92f34d72

sci-chemistry/MDAnalysis: add version 2.0.0, enable py3.10

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild | 37 ++++++++++++++++++++++++
 sci-chemistry/MDAnalysis/Manifest                |  1 +
 2 files changed, 38 insertions(+)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild
new file mode 100644
index 000000000000..aee4e82b683e
--- /dev/null
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{8..10} )
+
+inherit distutils-r1
+
+DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
+HOMEPAGE="https://www.mdanalysis.org"
+SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz"
+
+SLOT="0"
+LICENSE="GPL-2"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+
+# TODO: fix this
+# ImportError: MDAnalysis not installed properly. This can happen if your C extensions have not been built.
+RESTRICT="test"
+
+RDEPEND="
+	>=dev-python/numpy-1.16.0[${PYTHON_USEDEP}]
+	>=dev-python/scipy-1.0.0[${PYTHON_USEDEP}]
+	>=sci-biology/biopython-1.71[${PYTHON_USEDEP}]
+	>=dev-python/networkx-1.0[${PYTHON_USEDEP}]
+	>=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}]
+	>=dev-python/joblib-0.12[${PYTHON_USEDEP}]
+	>=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}]
+	>=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}]
+	>=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}]
+	>=dev-python/gsd-1.9.3[${PYTHON_USEDEP}]
+	dev-python/threadpoolctl[${PYTHON_USEDEP}]
+"
+BDEPEND="${RDEPEND}"
+
+distutils_enable_tests nose

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index 5a903a9f3b7f..721870b0e526 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1 +1,2 @@
 DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195
+DIST MDAnalysis-2.0.0.tar.gz 3436654 BLAKE2B b29734dd61bfa1e4e1d6ead0eb9a2d00869d1adce18edf95b9368bdcc16b0d71d0d6536a7df48787034a623bf52585e1636842dcaaa9dde08a69576868c1657b SHA512 037eb3c709b9ddbdb2ba9b26a6632ff99a95331c3968176573076e4e208c8644c3ea262e1e9880f185eb080ff90180d887444cab0dfbfad04fc254d87f1ff986


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2022-01-13 16:15 Alexey Shvetsov
  0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2022-01-13 16:15 UTC (permalink / raw
  To: gentoo-commits

commit:     8d0960905e8f8f0a9502131aaf78a52e80163c00
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Thu Jan 13 16:15:00 2022 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Thu Jan 13 16:15:00 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8d096090

sci-chemistry/MDAnalysis: add py 3.10

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
index 0b58e90489e4..1f9c2ac3aa5e 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{7..10} )
 
 inherit distutils-r1
 


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2022-12-25 22:15 Alexey Shvetsov
  0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2022-12-25 22:15 UTC (permalink / raw
  To: gentoo-commits

commit:     1b327b9680ee5a6b83e2f600aa177da6796152a5
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sun Dec 25 22:13:18 2022 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sun Dec 25 22:14:59 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1b327b96

sci-chemistry/MDAnalysis: Version bump. No longer depend on nose

Closes: https://bugs.gentoo.org/765160
Closes: https://bugs.gentoo.org/878723
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild   | 37 ----------------------
 ...alysis-2.0.0.ebuild => MDAnalysis-2.4.1.ebuild} |  6 ++--
 sci-chemistry/MDAnalysis/Manifest                  |  3 +-
 3 files changed, 5 insertions(+), 41 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
deleted file mode 100644
index 1f9c2ac3aa5e..000000000000
--- a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7..10} )
-
-inherit distutils-r1
-
-DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
-HOMEPAGE="https://www.mdanalysis.org"
-SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz"
-
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="test"
-
-RDEPEND="
-	>=dev-python/numpy-1.13.3[${PYTHON_USEDEP}]
-	>=dev-python/scipy-1.0.0[${PYTHON_USEDEP}]
-	>=sci-biology/biopython-1.71[${PYTHON_USEDEP}]
-	>=dev-python/networkx-1.0[${PYTHON_USEDEP}]
-	>=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}]
-	>=dev-python/joblib-0.12[${PYTHON_USEDEP}]
-	>=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}]
-	dev-python/netcdf4-python[${PYTHON_USEDEP}]
-	>=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}]
-	>=dev-python/gsd-1.9.3[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dev-python/duecredit[${PYTHON_USEDEP}]
-	>=dev-python/six-1.4.0[${PYTHON_USEDEP}]
-	>=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}]
-"
-BDEPEND="${RDEPEND}"
-
-distutils_enable_tests nose

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
similarity index 91%
rename from sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild
rename to sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
index aee4e82b683e..5d561772ca51 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
@@ -1,10 +1,12 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
 
 PYTHON_COMPAT=( python3_{8..10} )
 
+DISTUTILS_USE_PEP517=setuptools
+
 inherit distutils-r1
 
 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
@@ -34,4 +36,4 @@ RDEPEND="
 "
 BDEPEND="${RDEPEND}"
 
-distutils_enable_tests nose
+distutils_enable_tests pytest

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index 721870b0e526..81a4e8053d86 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1,2 +1 @@
-DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195
-DIST MDAnalysis-2.0.0.tar.gz 3436654 BLAKE2B b29734dd61bfa1e4e1d6ead0eb9a2d00869d1adce18edf95b9368bdcc16b0d71d0d6536a7df48787034a623bf52585e1636842dcaaa9dde08a69576868c1657b SHA512 037eb3c709b9ddbdb2ba9b26a6632ff99a95331c3968176573076e4e208c8644c3ea262e1e9880f185eb080ff90180d887444cab0dfbfad04fc254d87f1ff986
+DIST MDAnalysis-2.4.1.tar.gz 3746899 BLAKE2B af63f74a31dcde8a68cbffe5158f2f955d5eda1345bcff6a19e8df3284101b1e85006de3326d29d4fe1867dc6b0c5f55467b9e3242704f97440c6a43b52f47b8 SHA512 796dad98c26bd36f30db166bea5ff782aa5e3ac5cddb1675b628fb753a4f645fb27e06d3986047e2ba21a22cd91f96d0ba8e529256ed960a2b7cf95204076927


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2023-03-17 15:29 Michał Górny
  0 siblings, 0 replies; 17+ messages in thread
From: Michał Górny @ 2023-03-17 15:29 UTC (permalink / raw
  To: gentoo-commits

commit:     06c822c1d19968c64d712610dff268baaf486c78
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Fri Mar 17 12:00:21 2023 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Fri Mar 17 15:28:39 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=06c822c1

sci-chemistry/MDAnalysis: Use pypi.eclass

Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
index 346d11a4f660..5e7d91b36bf3 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
@@ -6,12 +6,12 @@ EAPI=8
 PYTHON_COMPAT=( python3_{9..10} )
 
 DISTUTILS_USE_PEP517=setuptools
+PYPI_NO_NORMALIZE=1
 
-inherit distutils-r1
+inherit distutils-r1 pypi
 
 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
 HOMEPAGE="https://www.mdanalysis.org"
-SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz"
 
 SLOT="0"
 LICENSE="GPL-2"


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2023-05-02 18:42 Pacho Ramos
  0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2023-05-02 18:42 UTC (permalink / raw
  To: gentoo-commits

commit:     618bc6c662f2658d4e245c75143a2d3189015f91
Author:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Tue May  2 18:33:23 2023 +0000
Commit:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Tue May  2 18:42:46 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=618bc6c6

sci-chemistry/MDAnalysis: add 2.4.3

Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild | 39 ++++++++++++++++++++++++
 sci-chemistry/MDAnalysis/Manifest                |  1 +
 2 files changed, 40 insertions(+)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
new file mode 100644
index 000000000000..5e7d91b36bf3
--- /dev/null
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
@@ -0,0 +1,39 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{9..10} )
+
+DISTUTILS_USE_PEP517=setuptools
+PYPI_NO_NORMALIZE=1
+
+inherit distutils-r1 pypi
+
+DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
+HOMEPAGE="https://www.mdanalysis.org"
+
+SLOT="0"
+LICENSE="GPL-2"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+
+# TODO: fix this
+# ImportError: MDAnalysis not installed properly. This can happen if your C extensions have not been built.
+RESTRICT="test"
+
+RDEPEND="
+	>=dev-python/numpy-1.16.0[${PYTHON_USEDEP}]
+	>=dev-python/scipy-1.0.0[${PYTHON_USEDEP}]
+	>=sci-biology/biopython-1.71[${PYTHON_USEDEP}]
+	>=dev-python/networkx-1.0[${PYTHON_USEDEP}]
+	>=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}]
+	>=dev-python/joblib-0.12[${PYTHON_USEDEP}]
+	>=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}]
+	>=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}]
+	>=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}]
+	>=dev-python/gsd-1.9.3[${PYTHON_USEDEP}]
+	dev-python/threadpoolctl[${PYTHON_USEDEP}]
+"
+BDEPEND="${RDEPEND}"
+
+distutils_enable_tests pytest

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index 81a4e8053d86..ce48cb3b96d6 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1 +1,2 @@
 DIST MDAnalysis-2.4.1.tar.gz 3746899 BLAKE2B af63f74a31dcde8a68cbffe5158f2f955d5eda1345bcff6a19e8df3284101b1e85006de3326d29d4fe1867dc6b0c5f55467b9e3242704f97440c6a43b52f47b8 SHA512 796dad98c26bd36f30db166bea5ff782aa5e3ac5cddb1675b628fb753a4f645fb27e06d3986047e2ba21a22cd91f96d0ba8e529256ed960a2b7cf95204076927
+DIST MDAnalysis-2.4.3.tar.gz 3747565 BLAKE2B 733be78aa3e57e8bbb9c291606a86d9100cb904cc587fa3e44c4205596b4da7eb5c2247388655dcd145b45ca6ecb47a3f95d7d659d029232d1febd2ebc99ab51 SHA512 0870bc392ef8b8fbae68cf60d1df2f5d413f4d1235ca795421061fd32a8fe97867d5bd610288237a59d1075f31cc43d281ab2f1e7e8bb0767dac7d278b8453d8


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2023-05-20  6:31 Michał Górny
  0 siblings, 0 replies; 17+ messages in thread
From: Michał Górny @ 2023-05-20  6:31 UTC (permalink / raw
  To: gentoo-commits

commit:     a5c4125c4178dda6ed3d31523cd213431ba51abe
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Sat May 20 06:29:21 2023 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sat May 20 06:31:41 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a5c4125c

sci-chemistry/MDAnalysis: Remove old

Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild | 39 ------------------------
 sci-chemistry/MDAnalysis/Manifest                |  1 -
 2 files changed, 40 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
deleted file mode 100644
index 5e7d91b36bf3..000000000000
--- a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{9..10} )
-
-DISTUTILS_USE_PEP517=setuptools
-PYPI_NO_NORMALIZE=1
-
-inherit distutils-r1 pypi
-
-DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
-HOMEPAGE="https://www.mdanalysis.org"
-
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-
-# TODO: fix this
-# ImportError: MDAnalysis not installed properly. This can happen if your C extensions have not been built.
-RESTRICT="test"
-
-RDEPEND="
-	>=dev-python/numpy-1.16.0[${PYTHON_USEDEP}]
-	>=dev-python/scipy-1.0.0[${PYTHON_USEDEP}]
-	>=sci-biology/biopython-1.71[${PYTHON_USEDEP}]
-	>=dev-python/networkx-1.0[${PYTHON_USEDEP}]
-	>=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}]
-	>=dev-python/joblib-0.12[${PYTHON_USEDEP}]
-	>=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}]
-	>=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}]
-	>=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}]
-	>=dev-python/gsd-1.9.3[${PYTHON_USEDEP}]
-	dev-python/threadpoolctl[${PYTHON_USEDEP}]
-"
-BDEPEND="${RDEPEND}"
-
-distutils_enable_tests pytest

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index ce48cb3b96d6..b24016480d20 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1,2 +1 @@
-DIST MDAnalysis-2.4.1.tar.gz 3746899 BLAKE2B af63f74a31dcde8a68cbffe5158f2f955d5eda1345bcff6a19e8df3284101b1e85006de3326d29d4fe1867dc6b0c5f55467b9e3242704f97440c6a43b52f47b8 SHA512 796dad98c26bd36f30db166bea5ff782aa5e3ac5cddb1675b628fb753a4f645fb27e06d3986047e2ba21a22cd91f96d0ba8e529256ed960a2b7cf95204076927
 DIST MDAnalysis-2.4.3.tar.gz 3747565 BLAKE2B 733be78aa3e57e8bbb9c291606a86d9100cb904cc587fa3e44c4205596b4da7eb5c2247388655dcd145b45ca6ecb47a3f95d7d659d029232d1febd2ebc99ab51 SHA512 0870bc392ef8b8fbae68cf60d1df2f5d413f4d1235ca795421061fd32a8fe97867d5bd610288237a59d1075f31cc43d281ab2f1e7e8bb0767dac7d278b8453d8


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2023-05-20  6:31 Michał Górny
  0 siblings, 0 replies; 17+ messages in thread
From: Michał Górny @ 2023-05-20  6:31 UTC (permalink / raw
  To: gentoo-commits

commit:     4fa363bada3a444f79eaa7e7b2d46420c1a0e399
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Sat May 20 06:30:11 2023 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sat May 20 06:31:42 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4fa363ba

sci-chemistry/MDAnalysis: Remove ~x86 because of broken deps

Bug: https://bugs.gentoo.org/833832
Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
index 5e7d91b36bf3..0af1d80718b4 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
@@ -15,7 +15,7 @@ HOMEPAGE="https://www.mdanalysis.org"
 
 SLOT="0"
 LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="~amd64 ~amd64-linux"
 
 # TODO: fix this
 # ImportError: MDAnalysis not installed properly. This can happen if your C extensions have not been built.


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2023-05-20 11:36 Pacho Ramos
  0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2023-05-20 11:36 UTC (permalink / raw
  To: gentoo-commits

commit:     15b653e65be7c5a5ef28b45bc93435027689054b
Author:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Sat May 20 11:36:03 2023 +0000
Commit:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Sat May 20 11:36:03 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=15b653e6

sci-chemistry/MDAnalysis: enable py3.11

Closes: https://bugs.gentoo.org/897194
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
index 0af1d80718b4..d407b705b2c5 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_{9..10} )
+PYTHON_COMPAT=( python3_{9..11} )
 
 DISTUTILS_USE_PEP517=setuptools
 PYPI_NO_NORMALIZE=1


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2023-10-14  6:17 Alexey Shvetsov
  0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2023-10-14  6:17 UTC (permalink / raw
  To: gentoo-commits

commit:     420e230bc8651f4c6dbc78a97fc9f6b9d26cf83c
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sat Oct 14 06:17:11 2023 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sat Oct 14 06:17:11 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=420e230b

sci-chemistry/MDAnalysis: add 2.6.1, drop 2.4.3

Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>

 .../MDAnalysis/{MDAnalysis-2.4.3.ebuild => MDAnalysis-2.6.1.ebuild}     | 0
 sci-chemistry/MDAnalysis/Manifest                                       | 2 +-
 2 files changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild
similarity index 100%
rename from sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild
rename to sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index b24016480d20..7a670797adfa 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1 +1 @@
-DIST MDAnalysis-2.4.3.tar.gz 3747565 BLAKE2B 733be78aa3e57e8bbb9c291606a86d9100cb904cc587fa3e44c4205596b4da7eb5c2247388655dcd145b45ca6ecb47a3f95d7d659d029232d1febd2ebc99ab51 SHA512 0870bc392ef8b8fbae68cf60d1df2f5d413f4d1235ca795421061fd32a8fe97867d5bd610288237a59d1075f31cc43d281ab2f1e7e8bb0767dac7d278b8453d8
+DIST MDAnalysis-2.6.1.tar.gz 4173280 BLAKE2B 14aae62733ace3eff686f6ba6be8326f86ba24c55e3870aa2e5dd88a858ca0de8d89589a622687bec3aafd332d9ccb5d6e6166eb370f56eaf79af5081f3a003e SHA512 421a27e508bcf7845b0c91f40c01bba4a48bf8ba9a3d3ed50fe555336c96fb1f64bccc5cf3ee048130d2eef9b18b8550ed5f73d3459f8962343ba694d00655bb


^ permalink raw reply related	[flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
@ 2024-06-05 17:27 Alexey Shvetsov
  0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2024-06-05 17:27 UTC (permalink / raw
  To: gentoo-commits

commit:     7efaff20543eff251c5493095db6febe5edb52e3
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Wed Jun  5 17:22:41 2024 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Wed Jun  5 17:22:41 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7efaff20

sci-chemistry/MDAnalysis: enable py3.12

Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild
index d407b705b2c5..f83ee1eabaf1 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2023 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_{9..11} )
+PYTHON_COMPAT=( python3_{10..12} )
 
 DISTUTILS_USE_PEP517=setuptools
 PYPI_NO_NORMALIZE=1
@@ -12,9 +12,9 @@ inherit distutils-r1 pypi
 
 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
 HOMEPAGE="https://www.mdanalysis.org"
+LICENSE="GPL-2"
 
 SLOT="0"
-LICENSE="GPL-2"
 KEYWORDS="~amd64 ~amd64-linux"
 
 # TODO: fix this


^ permalink raw reply related	[flat|nested] 17+ messages in thread
end of thread, other threads:[~2024-06-05 17:27 UTC | newest]

Thread overview: 17+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2015-09-01 20:06 [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/mdanalysis/ Tobias Klausmann
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2018-05-16 22:57 Aaron Bauman
2018-06-28 12:20 [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/ Alexey Shvetsov
2019-11-17 15:12 Alexey Shvetsov
2019-12-26 20:46 David Seifert
2021-01-12 20:25 Pacho Ramos
2021-01-18 10:14 David Seifert
2021-12-28 14:15 Andrew Ammerlaan
2022-01-13 16:15 Alexey Shvetsov
2022-12-25 22:15 Alexey Shvetsov
2023-03-17 15:29 Michał Górny
2023-05-02 18:42 Pacho Ramos
2023-05-20  6:31 Michał Górny
2023-05-20  6:31 Michał Górny
2023-05-20 11:36 Pacho Ramos
2023-10-14  6:17 Alexey Shvetsov
2024-06-05 17:27 Alexey Shvetsov

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