[gentoo-commits] proj/sci:master commit in: sci-libs/jhdf5/

[gentoo-commits] proj/sci:master commit in: sci-libs/jhdf5/

[Martin Mokrejs]

commit:     ee009dbda9b1e60289177cf2921ef912df77df39
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Jun 10 13:25:15 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed Jun 10 13:25:15 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ee009dbd

a skeleton for a java package

Package-Manager: portage-2.2.18

 sci-libs/jhdf5/ChangeLog            |  9 +++++++++
 sci-libs/jhdf5/jhdf5-14.12.1.ebuild | 26 ++++++++++++++++++++++++++
 sci-libs/jhdf5/metadata.xml         |  9 +++++++++
 3 files changed, 44 insertions(+)

diff --git a/sci-libs/jhdf5/ChangeLog b/sci-libs/jhdf5/ChangeLog
new file mode 100644
index 0000000..48f71af
--- /dev/null
+++ b/sci-libs/jhdf5/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-libs/jhdf5
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*jhdf5-14.12.1 (10 Jun 2015)
+
+  10 Jun 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  +jhdf5-14.12.1.ebuild, +metadata.xml:
+  a skeleton for a java package

diff --git a/sci-libs/jhdf5/jhdf5-14.12.1.ebuild b/sci-libs/jhdf5/jhdf5-14.12.1.ebuild
new file mode 100644
index 0000000..da6b584
--- /dev/null
+++ b/sci-libs/jhdf5/jhdf5-14.12.1.ebuild
@@ -0,0 +1,26 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit java-pkg-2 java-ant-2
+
+DESCRIPTION="Java binding for HDF5 compatible with HDF5 1.6/1.8"
+HOMEPAGE="https://wiki-bsse.ethz.ch/display/JHDF5
+	https://wiki-bsse.ethz.ch/pages/viewpage.action?pageId=26609113"
+SRC_URI="https://wiki-bsse.ethz.ch/download/attachments/26609237/sis-jhdf5-14.12.1-r33502.zip"
+# first SIS release: https://wiki-bsse.ethz.ch/download/attachments/26609237/sis-jhdf5-14.12.0-r33145.zip
+# last CISD release: https://wiki-bsse.ethz.ch/download/attachments/26609237/cisd-jhdf5-13.06.2-r29633.zip
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+# versions <=12.02 required >=java-1.5
+DEPEND=">=virtual/jdk-1.6:*"
+RDEPEND="${DEPEND}
+	>=virtual/jre-1.6:*"
+
+S="${WORKDIR}"/sis-jhdf5

diff --git a/sci-libs/jhdf5/metadata.xml b/sci-libs/jhdf5/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-libs/jhdf5/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+</pkgmetadata>

[gentoo-commits] proj/sci:master commit in: sci-libs/jhdf5/

[Andrew Ammerlaan]

commit:     21c233f366c713dccd794d5780843e25075a6ac1
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Tue Jan 19 16:45:47 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Tue Jan 19 16:45:47 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=21c233f3

sci-libs/jhdf5: depend on unzip

Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-libs/jhdf5/jhdf5-14.12.1.ebuild | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/sci-libs/jhdf5/jhdf5-14.12.1.ebuild b/sci-libs/jhdf5/jhdf5-14.12.1.ebuild
index 587bc370e..c3e6fbf24 100644
--- a/sci-libs/jhdf5/jhdf5-14.12.1.ebuild
+++ b/sci-libs/jhdf5/jhdf5-14.12.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=5
@@ -18,7 +18,8 @@ KEYWORDS=""
 IUSE=""
 
 # versions <=12.02 required >=java-1.5
-DEPEND=">=virtual/jdk-1.6:*"
+DEPEND=">=virtual/jdk-1.6:*
+	app-arch/unzip"
 RDEPEND="${DEPEND}
 	>=virtual/jre-1.6:*"
 

[gentoo-commits] proj/sci:master commit in: sci-libs/jhdf5/

[Andrew Ammerlaan]

commit:     6dac9cf7f3c06ee6fb2658a35a9e8fa6ae8d1d9b
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Thu Feb  4 08:34:09 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Thu Feb  4 08:34:09 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=6dac9cf7

sci-libs/jhdf5: version bump, EAPI bump, add keywords

Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-libs/jhdf5/jhdf5-14.12.1.ebuild | 26 --------------------------
 sci-libs/jhdf5/jhdf5-19.04.0.ebuild | 37 +++++++++++++++++++++++++++++++++++++
 2 files changed, 37 insertions(+), 26 deletions(-)

diff --git a/sci-libs/jhdf5/jhdf5-14.12.1.ebuild b/sci-libs/jhdf5/jhdf5-14.12.1.ebuild
deleted file mode 100644
index c3e6fbf24..000000000
--- a/sci-libs/jhdf5/jhdf5-14.12.1.ebuild
+++ /dev/null
@@ -1,26 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit java-pkg-2 java-ant-2
-
-DESCRIPTION="Java binding for HDF5 compatible with HDF5 1.6/1.8"
-HOMEPAGE="https://wiki-bsse.ethz.ch/display/JHDF5
-	https://wiki-bsse.ethz.ch/pages/viewpage.action?pageId=26609113"
-SRC_URI="https://wiki-bsse.ethz.ch/download/attachments/26609237/sis-jhdf5-14.12.1-r33502.zip"
-# first SIS release: https://wiki-bsse.ethz.ch/download/attachments/26609237/sis-jhdf5-14.12.0-r33145.zip
-# last CISD release: https://wiki-bsse.ethz.ch/download/attachments/26609237/cisd-jhdf5-13.06.2-r29633.zip
-
-LICENSE="Apache-2.0"
-SLOT="0"
-KEYWORDS=""
-IUSE=""
-
-# versions <=12.02 required >=java-1.5
-DEPEND=">=virtual/jdk-1.6:*
-	app-arch/unzip"
-RDEPEND="${DEPEND}
-	>=virtual/jre-1.6:*"
-
-S="${WORKDIR}"/sis-jhdf5

diff --git a/sci-libs/jhdf5/jhdf5-19.04.0.ebuild b/sci-libs/jhdf5/jhdf5-19.04.0.ebuild
new file mode 100644
index 000000000..588503cfe
--- /dev/null
+++ b/sci-libs/jhdf5/jhdf5-19.04.0.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+inherit java-pkg-2 java-ant-2
+
+DESCRIPTION="Java binding for HDF5 compatible with HDF5 1.6/1.8"
+HOMEPAGE="https://wiki-bsse.ethz.ch/display/JHDF5"
+SRC_URI="https://wiki-bsse.ethz.ch/download/attachments/26609237/sis-jhdf5-${PV}.zip"
+# first SIS release: https://wiki-bsse.ethz.ch/download/attachments/26609237/sis-jhdf5-14.12.0-r33145.zip
+# last CISD release: https://wiki-bsse.ethz.ch/download/attachments/26609237/cisd-jhdf5-13.06.2-r29633.zip
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64"
+
+DEPEND="
+	>=virtual/jdk-1.7:*
+	app-arch/unzip
+	dev-java/args4j:*
+	dev-java/commons-io:*
+	dev-java/commons-lang:*
+"
+RDEPEND="${DEPEND}
+	>=virtual/jre-1.7:*"
+
+S="${WORKDIR}/sis-jhdf5"
+
+src_install() {
+	dobin bin/h5ar
+	java-pkg_newjar lib/sis-${P}.jar sis-${PN}.jar
+	java-pkg_dolauncher sis-${PN} --jar sis-${PN}.jar
+	java-pkg_newjar lib/sis-${PN}-h5ar-cli-${PV}.jar sis-${PN}-h5ar-cli.jar
+	java-pkg_dolauncher sis-${PN}-h5ar-cli --jar sis-${PN}-h5ar-cli.jar
+	dodoc doc/JHDF5-${PV}.*
+}