* [gentoo-commits] proj/sci:master commit in: sci-biology/lighter/
@ 2015-05-01 21:48 Martin Mokrejs
0 siblings, 0 replies; 5+ messages in thread
From: Martin Mokrejs @ 2015-05-01 21:48 UTC (permalink / raw
To: gentoo-commits
commit: f0525146c4040655c2e34e13a6d8ecdcaeec172b
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri May 1 21:47:38 2015 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri May 1 21:47:38 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=f0525146
sci-libs/lighter: new package; contains IUSE=threads but ... does the Makefile need a tweak for -lpthreads ? ;-). Go ahead and fix this.
Package-Manager: portage-2.2.18
sci-biology/lighter/ChangeLog | 10 +++++++++
sci-biology/lighter/lighter-9999.ebuild | 36 +++++++++++++++++++++++++++++++++
sci-biology/lighter/metadata.xml | 9 +++++++++
3 files changed, 55 insertions(+)
diff --git a/sci-biology/lighter/ChangeLog b/sci-biology/lighter/ChangeLog
new file mode 100644
index 0000000..a24b936
--- /dev/null
+++ b/sci-biology/lighter/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/lighter
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*lighter-9999 (01 May 2015)
+
+ 01 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+ +lighter-9999.ebuild, +metadata.xml:
+ sci-libs/lighter: new package; contains IUSE=threads but ... does the Makefile
+ need a tweak for -lpthreads ? ;-). Go ahead and fix this.
diff --git a/sci-biology/lighter/lighter-9999.ebuild b/sci-biology/lighter/lighter-9999.ebuild
new file mode 100644
index 0000000..8e2319a
--- /dev/null
+++ b/sci-biology/lighter/lighter-9999.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit toolchain-funcs
+
+[ "$PV" == "9999" ] && inherit git-r3
+
+DESCRIPTION="NGS reads corrector"
+HOMEPAGE="https://github.com/mourisl/Lighter"
+if [ "$PV" == "9999" ]; then
+ EGIT_REPO_URI="https://github.com/mourisl/Lighter.git"
+ KEYWORDS=""
+else
+ SRC_URI=""
+ KEYWORDS=""
+fi
+
+LICENSE="GPL-2+"
+SLOT="0"
+IUSE="threads"
+
+DEPEND="sys-libs/zlib
+ sci-libs/bloom"
+RDEPEND="${DEPEND}"
+
+src_prepare(){
+ sed -e "s#g++#$(tc-getCC)#;s#-Wall -O3#${CXXFLAGS}#" -i Makefile || die
+}
+
+src_install(){
+ dobin lighter
+ dodoc README.md
+}
diff --git a/sci-biology/lighter/metadata.xml b/sci-biology/lighter/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/lighter/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-biology</herd>
+ <maintainer>
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/lighter/
@ 2015-06-05 11:20 Justin Lecher
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher @ 2015-06-05 11:20 UTC (permalink / raw
To: gentoo-commits
commit: c9eb47e3b281a3cd48d27e210af4d60b8074c2c3
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 5 11:05:52 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Jun 5 11:05:52 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c9eb47e3
sci-biology/lighter: Add github to remote-id in metadata.xml
Package-Manager: portage-2.2.20
sci-biology/lighter/ChangeLog | 3 +++
sci-biology/lighter/metadata.xml | 3 +++
2 files changed, 6 insertions(+)
diff --git a/sci-biology/lighter/ChangeLog b/sci-biology/lighter/ChangeLog
index a24b936..aac7e6b 100644
--- a/sci-biology/lighter/ChangeLog
+++ b/sci-biology/lighter/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 05 Jun 2015; Justin Lecher <jlec@gentoo.org> metadata.xml:
+ sci-biology/lighter: Add github to remote-id in metadata.xml
+
*lighter-9999 (01 May 2015)
01 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
diff --git a/sci-biology/lighter/metadata.xml b/sci-biology/lighter/metadata.xml
index 2bc8930..5a9ca59 100644
--- a/sci-biology/lighter/metadata.xml
+++ b/sci-biology/lighter/metadata.xml
@@ -6,4 +6,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
+ <upstream>
+ <remote-id type="github">mourisl/Lighter</remote-id>
+ </upstream>
</pkgmetadata>
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/lighter/
@ 2021-01-10 12:48 Andrew Ammerlaan
0 siblings, 0 replies; 5+ messages in thread
From: Andrew Ammerlaan @ 2021-01-10 12:48 UTC (permalink / raw
To: gentoo-commits
commit: de5b1efb11d4650358f56a3837629babb046037b
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sun Jan 10 12:48:03 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sun Jan 10 12:48:03 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=de5b1efb
sci-biology/lighter: add version 1.1.2
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
.../{lighter-9999.ebuild => lighter-1.1.2.ebuild} | 21 +++++++--------------
sci-biology/lighter/lighter-9999.ebuild | 21 +++++++--------------
2 files changed, 14 insertions(+), 28 deletions(-)
diff --git a/sci-biology/lighter/lighter-9999.ebuild b/sci-biology/lighter/lighter-1.1.2.ebuild
similarity index 55%
copy from sci-biology/lighter/lighter-9999.ebuild
copy to sci-biology/lighter/lighter-1.1.2.ebuild
index 87f6fb390..411337b74 100644
--- a/sci-biology/lighter/lighter-9999.ebuild
+++ b/sci-biology/lighter/lighter-1.1.2.ebuild
@@ -1,33 +1,26 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
-
-inherit toolchain-funcs
-
-[ "$PV" == "9999" ] && inherit git-r3
+EAPI=7
DESCRIPTION="NGS reads corrector"
HOMEPAGE="https://github.com/mourisl/Lighter"
if [ "$PV" == "9999" ]; then
+ inherit git-r3
EGIT_REPO_URI="https://github.com/mourisl/Lighter.git"
KEYWORDS=""
else
- SRC_URI=""
- KEYWORDS=""
+ SRC_URI="https://github.com/mourisl/Lighter/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+ KEYWORDS="~amd64"
fi
LICENSE="GPL-2+"
SLOT="0"
-IUSE="threads"
-DEPEND="sys-libs/zlib
- sci-libs/bloom"
+DEPEND="sys-libs/zlib"
RDEPEND="${DEPEND}"
-src_prepare(){
- sed -e "s#g++#$(tc-getCC)#;s#-Wall -O3#${CXXFLAGS}#" -i Makefile || die
-}
+S="${WORKDIR}/Lighter-${PV}"
src_install(){
dobin lighter
diff --git a/sci-biology/lighter/lighter-9999.ebuild b/sci-biology/lighter/lighter-9999.ebuild
index 87f6fb390..411337b74 100644
--- a/sci-biology/lighter/lighter-9999.ebuild
+++ b/sci-biology/lighter/lighter-9999.ebuild
@@ -1,33 +1,26 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
-
-inherit toolchain-funcs
-
-[ "$PV" == "9999" ] && inherit git-r3
+EAPI=7
DESCRIPTION="NGS reads corrector"
HOMEPAGE="https://github.com/mourisl/Lighter"
if [ "$PV" == "9999" ]; then
+ inherit git-r3
EGIT_REPO_URI="https://github.com/mourisl/Lighter.git"
KEYWORDS=""
else
- SRC_URI=""
- KEYWORDS=""
+ SRC_URI="https://github.com/mourisl/Lighter/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+ KEYWORDS="~amd64"
fi
LICENSE="GPL-2+"
SLOT="0"
-IUSE="threads"
-DEPEND="sys-libs/zlib
- sci-libs/bloom"
+DEPEND="sys-libs/zlib"
RDEPEND="${DEPEND}"
-src_prepare(){
- sed -e "s#g++#$(tc-getCC)#;s#-Wall -O3#${CXXFLAGS}#" -i Makefile || die
-}
+S="${WORKDIR}/Lighter-${PV}"
src_install(){
dobin lighter
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/lighter/
@ 2021-01-10 12:50 Andrew Ammerlaan
0 siblings, 0 replies; 5+ messages in thread
From: Andrew Ammerlaan @ 2021-01-10 12:50 UTC (permalink / raw
To: gentoo-commits
commit: 12d611addf8f8de1e70e8ae73d358d7f78d81c77
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sun Jan 10 12:50:34 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sun Jan 10 12:50:34 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=12d611ad
sci-biology/lighter: fix live ebuild
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-biology/lighter/lighter-1.1.2.ebuild | 3 +--
sci-biology/lighter/lighter-9999.ebuild | 3 +--
2 files changed, 2 insertions(+), 4 deletions(-)
diff --git a/sci-biology/lighter/lighter-1.1.2.ebuild b/sci-biology/lighter/lighter-1.1.2.ebuild
index 411337b74..1ce79a1c2 100644
--- a/sci-biology/lighter/lighter-1.1.2.ebuild
+++ b/sci-biology/lighter/lighter-1.1.2.ebuild
@@ -12,6 +12,7 @@ if [ "$PV" == "9999" ]; then
else
SRC_URI="https://github.com/mourisl/Lighter/archive/v${PV}.tar.gz -> ${P}.tar.gz"
KEYWORDS="~amd64"
+ S="${WORKDIR}/Lighter-${PV}"
fi
LICENSE="GPL-2+"
@@ -20,8 +21,6 @@ SLOT="0"
DEPEND="sys-libs/zlib"
RDEPEND="${DEPEND}"
-S="${WORKDIR}/Lighter-${PV}"
-
src_install(){
dobin lighter
dodoc README.md
diff --git a/sci-biology/lighter/lighter-9999.ebuild b/sci-biology/lighter/lighter-9999.ebuild
index 411337b74..1ce79a1c2 100644
--- a/sci-biology/lighter/lighter-9999.ebuild
+++ b/sci-biology/lighter/lighter-9999.ebuild
@@ -12,6 +12,7 @@ if [ "$PV" == "9999" ]; then
else
SRC_URI="https://github.com/mourisl/Lighter/archive/v${PV}.tar.gz -> ${P}.tar.gz"
KEYWORDS="~amd64"
+ S="${WORKDIR}/Lighter-${PV}"
fi
LICENSE="GPL-2+"
@@ -20,8 +21,6 @@ SLOT="0"
DEPEND="sys-libs/zlib"
RDEPEND="${DEPEND}"
-S="${WORKDIR}/Lighter-${PV}"
-
src_install(){
dobin lighter
dodoc README.md
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/lighter/
@ 2021-03-20 11:03 Andrew Ammerlaan
0 siblings, 0 replies; 5+ messages in thread
From: Andrew Ammerlaan @ 2021-03-20 11:03 UTC (permalink / raw
To: gentoo-commits
commit: ad6fcc6e770a288b0c53106d11b34fad56a3f31d
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Mar 20 10:59:09 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sat Mar 20 10:59:09 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ad6fcc6e
sci-biology/lighter: fix MultipleKeywordsLines
Package-Manager: Portage-3.0.17, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-biology/lighter/lighter-1.1.2.ebuild | 1 -
sci-biology/lighter/lighter-9999.ebuild | 1 -
2 files changed, 2 deletions(-)
diff --git a/sci-biology/lighter/lighter-1.1.2.ebuild b/sci-biology/lighter/lighter-1.1.2.ebuild
index 1ce79a1c2..2d08c45c4 100644
--- a/sci-biology/lighter/lighter-1.1.2.ebuild
+++ b/sci-biology/lighter/lighter-1.1.2.ebuild
@@ -8,7 +8,6 @@ HOMEPAGE="https://github.com/mourisl/Lighter"
if [ "$PV" == "9999" ]; then
inherit git-r3
EGIT_REPO_URI="https://github.com/mourisl/Lighter.git"
- KEYWORDS=""
else
SRC_URI="https://github.com/mourisl/Lighter/archive/v${PV}.tar.gz -> ${P}.tar.gz"
KEYWORDS="~amd64"
diff --git a/sci-biology/lighter/lighter-9999.ebuild b/sci-biology/lighter/lighter-9999.ebuild
index 1ce79a1c2..2d08c45c4 100644
--- a/sci-biology/lighter/lighter-9999.ebuild
+++ b/sci-biology/lighter/lighter-9999.ebuild
@@ -8,7 +8,6 @@ HOMEPAGE="https://github.com/mourisl/Lighter"
if [ "$PV" == "9999" ]; then
inherit git-r3
EGIT_REPO_URI="https://github.com/mourisl/Lighter.git"
- KEYWORDS=""
else
SRC_URI="https://github.com/mourisl/Lighter/archive/v${PV}.tar.gz -> ${P}.tar.gz"
KEYWORDS="~amd64"
^ permalink raw reply related [flat|nested] 5+ messages in thread
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