[gentoo-commits] proj/sci:master commit in: sci-biology/argo-bin/

["Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>]

commit:     caf6cafd3614ade1e427bb619a9c7cd61faee579
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue May 26 09:25:38 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue May 26 09:25:38 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=caf6cafd

sci-biology/argo-bin: ebuild cleanup; version bump

Package-Manager: portage-2.2.18

 sci-biology/argo-bin/ChangeLog                          |  6 ++++++
 sci-biology/argo-bin/argo-bin-1.0.31.ebuild             | 13 ++++++++-----
 .../{argo-bin-1.0.31.ebuild => argo-bin-2.0.3.ebuild}   | 17 ++++++++++-------
 3 files changed, 24 insertions(+), 12 deletions(-)

diff --git a/sci-biology/argo-bin/ChangeLog b/sci-biology/argo-bin/ChangeLog
index d8c050f..01ad496 100644
--- a/sci-biology/argo-bin/ChangeLog
+++ b/sci-biology/argo-bin/ChangeLog
@@ -2,6 +2,12 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*argo-bin-2.0.3 (26 May 2015)
+
+  26 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  +argo-bin-2.0.3.ebuild, argo-bin-1.0.31.ebuild:
+  sci-biology/argo-bin: ebuild cleanup; version bump
+
   25 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
   argo-bin-1.0.31.ebuild:
   sci-biology/argo-bin: redefine S variable so we can chdir to a WORKDIR (not

diff --git a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild b/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
index 6db9160..db8efaf 100644
--- a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
+++ b/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
@@ -2,23 +2,26 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
-EAPI=4
+EAPI=5
 
 inherit java-utils-2 toolchain-funcs
 
 DESCRIPTION="Visualization and manually annotating whole genomes"
-HOMEPAGE="http://www.broadinstitute.org/annotation/argo/"
+HOMEPAGE="http://www.broadinstitute.org/annotation/argo2
+	http://www.broadinstitute.org/annotation/argo"
 SRC_URI="http://www.broadinstitute.org/annotation/argo/argo.jar"
-#SRC_URI="http://www.broadinstitute.org/annotation/argo/src/workspace-2008-03-11.tgz"
+#
+# Release Number: 1.0.31
+# Release Date:   2010-02-05
 
 LICENSE="LGPL-3"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE="java"
 
-DEPEND=""
+DEPEND="!sci-biology/argo"
 RDEPEND="${DEPEND}
-		java? ( >=virtual/jre-1.4 )"
+		java? ( >=virtual/jre-1.5:* )"
 
 S="${WORKDIR}"
 

diff --git a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild b/sci-biology/argo-bin/argo-bin-2.0.3.ebuild
similarity index 51%
copy from sci-biology/argo-bin/argo-bin-1.0.31.ebuild
copy to sci-biology/argo-bin/argo-bin-2.0.3.ebuild
index 6db9160..5659a97 100644
--- a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
+++ b/sci-biology/argo-bin/argo-bin-2.0.3.ebuild
@@ -2,27 +2,30 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
-EAPI=4
+EAPI=5
 
 inherit java-utils-2 toolchain-funcs
 
 DESCRIPTION="Visualization and manually annotating whole genomes"
-HOMEPAGE="http://www.broadinstitute.org/annotation/argo/"
-SRC_URI="http://www.broadinstitute.org/annotation/argo/argo.jar"
-#SRC_URI="http://www.broadinstitute.org/annotation/argo/src/workspace-2008-03-11.tgz"
+HOMEPAGE="http://www.broadinstitute.org/annotation/argo2
+	http://www.broadinstitute.org/annotation/argo"
+SRC_URI="http://www.broadinstitute.org/annotation/argo2/releases/argo2.jar"
+#
+# Release Number: 3
+# Release Date:   2010-06-23
 
 LICENSE="LGPL-3"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE="java"
 
-DEPEND=""
+DEPEND="!sci-biology/argo"
 RDEPEND="${DEPEND}
-		java? ( >=virtual/jre-1.4 )"
+		java? ( >=virtual/jre-1.5:* )"
 
 S="${WORKDIR}"
 
 src_install() {
-	java-pkg_newjar "${DISTDIR}"/argo.jar argo.jar
+	java-pkg_newjar "${DISTDIR}"/argo2.jar argo2.jar
 	java-pkg_dolauncher
 }