From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 5E4BB138CCE for ; Tue, 5 May 2015 14:53:20 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 81618E082D; Tue, 5 May 2015 14:53:16 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 36A15E082D for ; Tue, 5 May 2015 14:53:15 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 11474340AF0 for ; Tue, 5 May 2015 14:53:15 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id B747B98C for ; Tue, 5 May 2015 14:53:13 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1430837554.826ad960ebdf08f8c34d5cfcf29003578fb054e5.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/prokka/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/prokka/ChangeLog sci-biology/prokka/prokka-1.11.ebuild X-VCS-Directories: sci-biology/prokka/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 826ad960ebdf08f8c34d5cfcf29003578fb054e5 X-VCS-Branch: master Date: Tue, 5 May 2015 14:53:13 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: c9db0e9f-32a1-4144-93ed-45c1c49bd8fa X-Archives-Hash: 04ffe171e585a0e794c675f51e48a84f commit: 826ad960ebdf08f8c34d5cfcf29003578fb054e5 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Tue May 5 14:52:34 2015 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Tue May 5 14:52:34 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=826ad960 sci-biology/prokka: more DEPs recorded Package-Manager: portage-2.2.18 sci-biology/prokka/ChangeLog | 3 +++ sci-biology/prokka/prokka-1.11.ebuild | 9 ++++++--- 2 files changed, 9 insertions(+), 3 deletions(-) diff --git a/sci-biology/prokka/ChangeLog b/sci-biology/prokka/ChangeLog index 4f5235a..caef8ba 100644 --- a/sci-biology/prokka/ChangeLog +++ b/sci-biology/prokka/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 05 May 2015; Martin Mokrejs prokka-1.11.ebuild: + sci-biology/prokka: more DEPs recorded + *prokka-1.11 (05 May 2015) 05 May 2015; Martin Mokrejs +metadata.xml, diff --git a/sci-biology/prokka/prokka-1.11.ebuild b/sci-biology/prokka/prokka-1.11.ebuild index 8fc53c5..c7a9d81 100644 --- a/sci-biology/prokka/prokka-1.11.ebuild +++ b/sci-biology/prokka/prokka-1.11.ebuild @@ -24,8 +24,11 @@ RDEPEND="${DEPEND} sci-biology/infernal sci-biology/exonerate sci-biology/barrnap" -# >=hmmer-3.1 +# sci-biology/minced +# >=sci-biolohy/hmmer-3.1 # Aragorn -# RNAmmer -# SignalP >= 4.0 +# >=RNAmmer-1.2 +# >=HMMmmer-2.0 (that is not sci-biology/hmmer) +# SignalP >= 3.0 # sequin +# tbl2asn >= 23.0 from wget --mirror -nH -nd ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program/tbl2asn/linux64.tbl2asn.gz