[gentoo-commits] proj/sci:master commit in: sci-biology/CAutils/

[gentoo-commits] proj/sci:master commit in: sci-biology/CAutils/

[Martin Mokrejs]

commit:     a33c4998b814ef85373f08d5f92f698a7b5c459e
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Wed Jan  7 21:53:04 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Wed Jan  7 21:53:04 2015 +0000
URL:        http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a33c4998

initial ebuild for a new package

---
 sci-biology/CAutils/CAutils-20120126.ebuild | 20 ++++++++++++++++++++
 sci-biology/CAutils/metadata.xml            |  9 +++++++++
 2 files changed, 29 insertions(+)

diff --git a/sci-biology/CAutils/CAutils-20120126.ebuild b/sci-biology/CAutils/CAutils-20120126.ebuild
new file mode 100644
index 0000000..7b1ca7b
--- /dev/null
+++ b/sci-biology/CAutils/CAutils-20120126.ebuild
@@ -0,0 +1,20 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=3
+
+DESCRIPTION="Additional utilities for Celera assembler (wgs-assembler) from UMD"
+HOMEPAGE="http://www.cbcb.umd.edu/research/CeleraAssembler.shtml"
+SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/CAutils.tar.gz"
+
+LICENSE=""
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}
+	dev-lang/perl"
+
+# is partially included in amos-3.1.0

diff --git a/sci-biology/CAutils/metadata.xml b/sci-biology/CAutils/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/CAutils/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+</pkgmetadata>

[gentoo-commits] proj/sci:master commit in: sci-biology/CAutils/

[Justin Lecher]

commit:     baf18af79124495ca8635308c469883363b02152
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Jan 10 13:53:01 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jan 10 13:53:01 2015 +0000
URL:        http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=baf18af7

sci-biology/CAutils: Fix license

Package-Manager: portage-2.2.15

---
 sci-biology/CAutils/CAutils-20120126.ebuild | 8 ++++----
 sci-biology/CAutils/ChangeLog               | 7 +++++++
 2 files changed, 11 insertions(+), 4 deletions(-)

diff --git a/sci-biology/CAutils/CAutils-20120126.ebuild b/sci-biology/CAutils/CAutils-20120126.ebuild
index 7b1ca7b..24478ec 100644
--- a/sci-biology/CAutils/CAutils-20120126.ebuild
+++ b/sci-biology/CAutils/CAutils-20120126.ebuild
@@ -1,14 +1,14 @@
-# Copyright 1999-2012 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
-EAPI=3
+EAPI=5
 
 DESCRIPTION="Additional utilities for Celera assembler (wgs-assembler) from UMD"
-HOMEPAGE="http://www.cbcb.umd.edu/research/CeleraAssembler.shtml"
+HOMEPAGE="http://www.cbcb.umd.edu/software/celera-assembler"
 SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/CAutils.tar.gz"
 
-LICENSE=""
+LICENSE="GPL-3"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE=""

diff --git a/sci-biology/CAutils/ChangeLog b/sci-biology/CAutils/ChangeLog
new file mode 100644
index 0000000..8e70c1a
--- /dev/null
+++ b/sci-biology/CAutils/ChangeLog
@@ -0,0 +1,7 @@
+# ChangeLog for sci-biology/CAutils
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+  10 Jan 2015; Justin Lecher <jlec@gentoo.org> CAutils-20120126.ebuild:
+  Fix license
+

[gentoo-commits] proj/sci:master commit in: sci-biology/CAutils/

[Martin Mokrejs]

commit:     0dcd49a236f011c297906277954c356496901847
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sat Apr 18 00:00:44 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sat Apr 18 00:00:44 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=0dcd49a2

sci-biology/CAutils: removed, is same as sci-biology/wgs-assembler

 sci-biology/CAutils/CAutils-20120126.ebuild | 20 --------------------
 sci-biology/CAutils/ChangeLog               |  7 -------
 sci-biology/CAutils/metadata.xml            |  9 ---------
 3 files changed, 36 deletions(-)

diff --git a/sci-biology/CAutils/CAutils-20120126.ebuild b/sci-biology/CAutils/CAutils-20120126.ebuild
deleted file mode 100644
index 24478ec..0000000
--- a/sci-biology/CAutils/CAutils-20120126.ebuild
+++ /dev/null
@@ -1,20 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-DESCRIPTION="Additional utilities for Celera assembler (wgs-assembler) from UMD"
-HOMEPAGE="http://www.cbcb.umd.edu/software/celera-assembler"
-SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/CAutils.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-DEPEND=""
-RDEPEND="${DEPEND}
-	dev-lang/perl"
-
-# is partially included in amos-3.1.0

diff --git a/sci-biology/CAutils/ChangeLog b/sci-biology/CAutils/ChangeLog
deleted file mode 100644
index 8e70c1a..0000000
--- a/sci-biology/CAutils/ChangeLog
+++ /dev/null
@@ -1,7 +0,0 @@
-# ChangeLog for sci-biology/CAutils
-# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
-  10 Jan 2015; Justin Lecher <jlec@gentoo.org> CAutils-20120126.ebuild:
-  Fix license
-

diff --git a/sci-biology/CAutils/metadata.xml b/sci-biology/CAutils/metadata.xml
deleted file mode 100644
index 2bc8930..0000000
--- a/sci-biology/CAutils/metadata.xml
+++ /dev/null
@@ -1,9 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-  <herd>sci-biology</herd>
-  <maintainer>
-    <email>mmokrejs@fold.natur.cuni.cz</email>
-    <name>Martin Mokrejs</name>
-  </maintainer>
-</pkgmetadata>