[gentoo-commits] proj/sci:master commit in: sci-biology/fsl/

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From: "Francois Bissey" <f.r.bissey@massey.ac.nz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/fsl/
Date: Mon, 20 Apr 2015 01:11:36 +0000 (UTC)	[thread overview]
Message-ID: <1428404945.17d1701d267f7c6beb268b4dd661f042ec4b4f0b.fbissey@gentoo> (raw)

commit:     17d1701d267f7c6beb268b4dd661f042ec4b4f0b
Author:     Horea Christian <h.chr <AT> mail <DOT> ru>
AuthorDate: Tue Apr  7 11:09:05 2015 +0000
Commit:     Francois Bissey <f.r.bissey <AT> massey <DOT> ac <DOT> nz>
CommitDate: Tue Apr  7 11:09:05 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=17d1701d

removed ebuilds with unavailable sources

Package-Manager: portage-2.2.18

 sci-biology/fsl/ChangeLog        |   3 +
 sci-biology/fsl/fsl-5.0.4.ebuild | 115 ---------------------------------------
 sci-biology/fsl/fsl-5.0.5.ebuild | 115 ---------------------------------------
 3 files changed, 3 insertions(+), 230 deletions(-)

diff --git a/sci-biology/fsl/ChangeLog b/sci-biology/fsl/ChangeLog
index 48835a1..e509710 100644
--- a/sci-biology/fsl/ChangeLog
+++ b/sci-biology/fsl/ChangeLog
@@ -2,6 +2,9 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  07 Apr 2015;  <chymera@gentoo.org> -fsl-5.0.4.ebuild, -fsl-5.0.5.ebuild:
+  removed ebuilds with unavailable sources
+
   07 Apr 2015;  <chymera@gentoo.org> fsl-5.0.6.ebuild:
   added new gentoo fsl-5.0.6 source location
 

diff --git a/sci-biology/fsl/fsl-5.0.4.ebuild b/sci-biology/fsl/fsl-5.0.4.ebuild
deleted file mode 100644
index b036faf..0000000
--- a/sci-biology/fsl/fsl-5.0.4.ebuild
+++ /dev/null
@@ -1,115 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-inherit eutils toolchain-funcs prefix
-
-DESCRIPTION="Analysis of functional, structural, and diffusion MRI brain imaging data"
-HOMEPAGE="http://www.fmrib.ox.ac.uk/fsl"
-SRC_URI="http://fsl.fmrib.ox.ac.uk/fsldownloads/${P}-sources.tar.gz"
-
-LICENSE="FSL BSD-2 newmat"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-COMMON_DEPEND="media-libs/glu
-	media-libs/libpng
-	media-libs/gd
-	sys-libs/zlib
-	dev-libs/boost
-	"
-DEPEND="${COMMON_DEPEND}"
-RDEPEND="${COMMON_DEPEND}
-	dev-lang/tcl
-	dev-lang/tk
-	"
-
-S=${WORKDIR}/${PN}
-
-src_prepare(){
-	epatch "${FILESDIR}/${P}"-setup.patch
-	epatch "${FILESDIR}/${P}"-headers.patch
-	epatch "${FILESDIR}/${P}"-fsldir_redux.patch
-
-	sed -i \
-		-e "s:@@GENTOO_RANLIB@@:$(tc-getRANLIB):" \
-		-e "s:@@GENTOO_CC@@:$(tc-getCC):" \
-		-e "s:@@GENTOO_CXX@@:$(tc-getCXX):" \
-		config/generic/systemvars.mk || die
-
-	eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX src/*) \
-		etc/js/label-div.html
-
-	makefilelist=$(find src/ -name Makefile)
-
-	sed -i \
-		-e "s:-I\${INC_BOOST}::" \
-		-e "s:-I\${INC_ZLIB}::" \
-		-e "s:-I\${INC_GD}::" \
-		-e "s:-I\${INC_PNG}::" \
-		-e "s:-L\${LIB_GD}::" \
-		-e "s:-L\${LIB_PNG}::" \
-		-e "s:-L\${LIB_ZLIB}::" \
-		${makefilelist} || die
-
-	sed -i "s:\${FSLDIR}/bin/::g" \
-		$(grep -rl "\${FSLDIR}/bin" src/*) \
-		$(grep -rl "\${FSLDIR}/bin" etc/matlab/*)
-	sed -i "s:\$FSLDIR/bin/::g" \
-		$(grep -rl "\$FSLDIR/bin" src/*) \
-		$(grep -rl "\$FSLDIR/bin" etc/matlab/*)
-
-	sed -i "s:\$FSLDIR/data:${EPREFIX}/usr/share/fsl/data:g" \
-		$(grep -rl "\$FSLDIR/data" src/*)
-
-	sed -i "s:\${FSLDIR}/data:${EPREFIX}/usr/share/fsl/data:g" \
-		$(grep -rl "\${FSLDIR}/data" src/*)
-
-	sed -i "s:\$FSLDIR/etc:${EPREFIX}/etc:g" \
-		$(grep -rl "\$FSLDIR/etc" src/*)
-
-	sed -i "s:\${FSLDIR}/etc:${EPREFIX}/etc:g" \
-		$(grep -rl "\${FSLDIR}/etc" src/*)
-
-	sed -i "s:\$FSLDIR/doc:${EPREFIX}/usr/share/fsl/doc:g" \
-		$(grep -rl "\$FSLDIR/doc" src/*)
-
-	sed -i "s:\${FSLDIR}/doc:${EPREFIX}/usr/share/fsl/doc:g" \
-		$(grep -rl "\${FSLDIR}/doc" src/*)
-
-	sed -i "s:\'\${FSLDIR}\'/doc:${EPREFIX}/usr/share/fsl/doc:g" \
-		$(grep -rl "\'\${FSLDIR}\'/doc" src/*)
-}
-
-src_compile() {
-	export FSLDIR=${WORKDIR}/${PN}
-	export FSLCONDIR=${WORKDIR}/${PN}/config
-	export FSLMACHTYPE=generic
-
-	export USERLDFLAGS="${LDFLAGS}"
-	export USERCFLAGS="${CFLAGS}"
-	export USERCXXFLAGS="${CXXFLAGS}"
-
-	./build || die
-}
-
-src_install() {
-	doexe bin/*
-
-	insinto /usr/share/${PN}
-	doins -r doc data refdoc
-
-	insinto /usr/libexec/fsl
-	doins -r tcl
-
-	insinto /etc
-	doins -r etc/default_flobs.flobs etc/flirtsch etc/js etc/luts
-	#if use matlab; then
-	#	doins etc/matlab
-	#fi
-
-	doenvd "${FILESDIR}"/99fsl
-}

diff --git a/sci-biology/fsl/fsl-5.0.5.ebuild b/sci-biology/fsl/fsl-5.0.5.ebuild
deleted file mode 100644
index 5b13e77..0000000
--- a/sci-biology/fsl/fsl-5.0.5.ebuild
+++ /dev/null
@@ -1,115 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-inherit eutils toolchain-funcs prefix
-
-DESCRIPTION="Analysis of functional, structural, and diffusion MRI brain imaging data"
-HOMEPAGE="http://www.fmrib.ox.ac.uk/fsl"
-SRC_URI="http://fsl.fmrib.ox.ac.uk/fsldownloads/${P}-sources.tar.gz"
-
-LICENSE="FSL BSD-2 newmat"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-COMMON_DEPEND="media-libs/glu
-	media-libs/libpng
-	media-libs/gd
-	sys-libs/zlib
-	dev-libs/boost
-	"
-DEPEND="${COMMON_DEPEND}"
-RDEPEND="${COMMON_DEPEND}
-	dev-lang/tcl
-	dev-lang/tk
-	"
-
-S=${WORKDIR}/${PN}
-
-src_prepare(){
-	epatch "${FILESDIR}/${PN}"-5.0.4-setup.patch
-	epatch "${FILESDIR}/${PN}"-5.0.4-headers.patch
-	epatch "${FILESDIR}/${PN}"-5.0.4-fsldir_redux.patch
-
-	sed -i \
-		-e "s:@@GENTOO_RANLIB@@:$(tc-getRANLIB):" \
-		-e "s:@@GENTOO_CC@@:$(tc-getCC):" \
-		-e "s:@@GENTOO_CXX@@:$(tc-getCXX):" \
-		config/generic/systemvars.mk || die
-
-	eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX src/*) \
-		etc/js/label-div.html
-
-	makefilelist=$(find src/ -name Makefile)
-
-	sed -i \
-		-e "s:-I\${INC_BOOST}::" \
-		-e "s:-I\${INC_ZLIB}::" \
-		-e "s:-I\${INC_GD}::" \
-		-e "s:-I\${INC_PNG}::" \
-		-e "s:-L\${LIB_GD}::" \
-		-e "s:-L\${LIB_PNG}::" \
-		-e "s:-L\${LIB_ZLIB}::" \
-		${makefilelist} || die
-
-	sed -i "s:\${FSLDIR}/bin/::g" \
-		$(grep -rl "\${FSLDIR}/bin" src/*) \
-		$(grep -rl "\${FSLDIR}/bin" etc/matlab/*)
-	sed -i "s:\$FSLDIR/bin/::g" \
-		$(grep -rl "\$FSLDIR/bin" src/*) \
-		$(grep -rl "\$FSLDIR/bin" etc/matlab/*)
-
-	sed -i "s:\$FSLDIR/data:${EPREFIX}/usr/share/fsl/data:g" \
-		$(grep -rl "\$FSLDIR/data" src/*)
-
-	sed -i "s:\${FSLDIR}/data:${EPREFIX}/usr/share/fsl/data:g" \
-		$(grep -rl "\${FSLDIR}/data" src/*)
-
-	sed -i "s:\$FSLDIR/etc:${EPREFIX}/etc:g" \
-		$(grep -rl "\$FSLDIR/etc" src/*)
-
-	sed -i "s:\${FSLDIR}/etc:${EPREFIX}/etc:g" \
-		$(grep -rl "\${FSLDIR}/etc" src/*)
-
-	sed -i "s:\$FSLDIR/doc:${EPREFIX}/usr/share/fsl/doc:g" \
-		$(grep -rl "\$FSLDIR/doc" src/*)
-
-	sed -i "s:\${FSLDIR}/doc:${EPREFIX}/usr/share/fsl/doc:g" \
-		$(grep -rl "\${FSLDIR}/doc" src/*)
-
-	sed -i "s:\'\${FSLDIR}\'/doc:${EPREFIX}/usr/share/fsl/doc:g" \
-		$(grep -rl "\'\${FSLDIR}\'/doc" src/*)
-}
-
-src_compile() {
-	export FSLDIR=${WORKDIR}/${PN}
-	export FSLCONDIR=${WORKDIR}/${PN}/config
-	export FSLMACHTYPE=generic
-
-	export USERLDFLAGS="${LDFLAGS}"
-	export USERCFLAGS="${CFLAGS}"
-	export USERCXXFLAGS="${CXXFLAGS}"
-
-	./build || die
-}
-
-src_install() {
-	doexe bin/*
-
-	insinto /usr/share/${PN}
-	doins -r doc data refdoc
-
-	insinto /usr/libexec/fsl
-	doins -r tcl
-
-	insinto /etc
-	doins -r etc/default_flobs.flobs etc/flirtsch etc/js etc/luts
-	#if use matlab; then
-	#	doins etc/matlab
-	#fi
-
-	doenvd "${FILESDIR}"/99fsl
-}

next             reply	other threads:[~2015-04-20  1:11 UTC|newest]

Thread overview: 27+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2015-04-20  1:11 Francois Bissey [this message]
  -- strict thread matches above, loose matches on Subject: below --
2024-02-29 21:15 [gentoo-commits] proj/sci:master commit in: sci-biology/fsl/ Horea Christian
2022-05-02 12:22 Andrew Ammerlaan
2022-01-15 15:59 Andrew Ammerlaan
2022-01-14 20:36 Andrew Ammerlaan
2021-06-01  9:24 Andrew Ammerlaan
2017-11-18 19:49 Justin Lecher
2016-04-13 10:47 Marius Brehler
2015-11-24  2:03 Christoph Junghans
2015-11-17 15:46 Justin Lecher
2015-11-05 15:14 Marius Brehler
2015-09-21 17:44 Justin Lecher
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey
2015-04-20  1:11 Francois Bissey

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