From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id B0FBF1387C9 for ; Tue, 31 Mar 2015 19:50:59 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 5F556E085A; Tue, 31 Mar 2015 19:50:59 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 1372FE085A for ; Tue, 31 Mar 2015 19:50:58 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 00B2E340686 for ; Tue, 31 Mar 2015 19:50:58 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 5E1E814F04 for ; Tue, 31 Mar 2015 19:50:53 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1427831420.ca1d210fcb7805b9b0facbf1e6896d84e123f4cc.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/jellyfish/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/jellyfish/ChangeLog sci-biology/jellyfish/jellyfish-2.1.3.ebuild X-VCS-Directories: sci-biology/jellyfish/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: ca1d210fcb7805b9b0facbf1e6896d84e123f4cc X-VCS-Branch: master Date: Tue, 31 Mar 2015 19:50:53 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 47ee26cd-3c69-4aa2-aff6-d089d6057024 X-Archives-Hash: e4f1eb372f53d2899315ee9e1ad05137 commit: ca1d210fcb7805b9b0facbf1e6896d84e123f4cc Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Tue Mar 31 19:50:20 2015 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Tue Mar 31 19:50:20 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ca1d210f sci-biology/jellyfish: fix installation of header *.hpp files into /usr/include/jellyfish-2.1.3/jellyfish/ broken somewhere in upstream's code Package-Manager: portage-2.2.18 sci-biology/jellyfish/ChangeLog | 5 +++++ sci-biology/jellyfish/jellyfish-2.1.3.ebuild | 9 ++++++++- 2 files changed, 13 insertions(+), 1 deletion(-) diff --git a/sci-biology/jellyfish/ChangeLog b/sci-biology/jellyfish/ChangeLog index cf2f8f7..5a84c98 100644 --- a/sci-biology/jellyfish/ChangeLog +++ b/sci-biology/jellyfish/ChangeLog @@ -2,6 +2,11 @@ # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 31 Mar 2015; Martin Mokrejs + jellyfish-2.1.3.ebuild: + sci-biology/jellyfish: fix installation of header *.hpp files into + /usr/include/jellyfish-2.1.3/jellyfish/ broken somewhere in upstream's code + 07 Jan 2015; Martin Mokrejs jellyfish-2.1.3.ebuild: added a comment on old version diff --git a/sci-biology/jellyfish/jellyfish-2.1.3.ebuild b/sci-biology/jellyfish/jellyfish-2.1.3.ebuild index 51f683c..cceca4b 100644 --- a/sci-biology/jellyfish/jellyfish-2.1.3.ebuild +++ b/sci-biology/jellyfish/jellyfish-2.1.3.ebuild @@ -4,7 +4,7 @@ EAPI=5 -DESCRIPTION="k-mer counter withing reads for assemblies" +DESCRIPTION="k-mer counter within reads for assemblies" HOMEPAGE="http://www.genome.umd.edu/jellyfish.html" SRC_URI="ftp://ftp.genome.umd.edu/pub/jellyfish/jellyfish-2.1.3.tar.gz ftp://ftp.genome.umd.edu/pub/jellyfish/JellyfishUserGuide.pdf" @@ -18,3 +18,10 @@ IUSE="" DEPEND="" RDEPEND="${DEPEND}" + +src_install(){ + default + mkdir -p ${D}/usr/include/${PN} || die + mv ${D}/usr/include/${P}/${PN}/* ${D}/usr/include/${PN}/ || die + rm -rf ${D}/usr/include/${P} +}