* [gentoo-commits] proj/sci:master commit in: sci-chemistry/cpmgfit/
@ 2014-07-03 8:53 Justin Lecher
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher @ 2014-07-03 8:53 UTC (permalink / raw
To: gentoo-commits
commit: f8cf0af19be4b013e93fa67566f08f292d05d89a
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Jul 3 08:53:52 2014 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jul 3 08:53:52 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f8cf0af1
sci-chemistry/cpmgfit: New package written by me
Package-Manager: portage-2.2.10
RepoMan-Options: --force
---
sci-chemistry/cpmgfit/ChangeLog | 10 +++++++
sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild | 49 +++++++++++++++++++++++++++++++
sci-chemistry/cpmgfit/metadata.xml | 5 ++++
3 files changed, 64 insertions(+)
diff --git a/sci-chemistry/cpmgfit/ChangeLog b/sci-chemistry/cpmgfit/ChangeLog
new file mode 100644
index 0000000..7eb5da6
--- /dev/null
+++ b/sci-chemistry/cpmgfit/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/cpmgfit
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*cpmgfit-1.43 (03 Jul 2014)
+
+ 03 Jul 2014; Justin Lecher <jlec@gentoo.org> +cpmgfit-1.43.ebuild,
+ +metadata.xml:
+ New package written by me
+
diff --git a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
new file mode 100644
index 0000000..37c657e
--- /dev/null
+++ b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
@@ -0,0 +1,49 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit fortran-2 multilib
+
+DESCRIPTION="non-linear least squares fitting of CPMG relaxation dispersion curves"
+HOMEPAGE="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.html"
+SRC_URI="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.linux.tar.gz -> ${P}.tar.gz"
+
+SLOT="0"
+LICENSE="GPL-2"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="examples"
+
+RDEPEND="
+ sci-libs/blas-reference
+ sys-devel/gcc:4.1"
+DEPEND="dev-util/patchelf"
+
+S="${WORKDIR}"/linux
+
+QA_PREBUILT="opt/bin/.*"
+
+src_install() {
+ local _exe
+
+ exeinto /opt/bin
+ if use x86; then
+ _exe=./linux_32/${PN}
+ elif use amd64; then
+ _exe=./linux_64/${PN}
+ fi
+
+ patchelf --set-rpath "${EPREFIX}/opt/${PN}:${EPREFIX}/usr/$(get_libdir)/gcc/x86_64-pc-linux-gnu/4.1.2/" ${_exe}
+
+ doexe ${_exe}
+
+ dosym ../../usr/$(get_libdir)/librefblas.so /opt/${PN}/libblas.so.3
+
+ dohtml ${PN}_manual.html
+
+ if use examples; then
+ insinto /usr/share/${PN}/examples/
+ doins sample*
+ fi
+}
diff --git a/sci-chemistry/cpmgfit/metadata.xml b/sci-chemistry/cpmgfit/metadata.xml
new file mode 100644
index 0000000..51fdeda
--- /dev/null
+++ b/sci-chemistry/cpmgfit/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-chemistry</herd>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 4+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/cpmgfit/
@ 2014-11-13 13:15 Justin Lecher
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher @ 2014-11-13 13:15 UTC (permalink / raw
To: gentoo-commits
commit: 24a3cf79b9c722f34c84aa90fedea03b88ee692a
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Nov 13 13:14:42 2014 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Nov 13 13:14:42 2014 +0000
URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=24a3cf79
sci-chemistry/cpmgfit: Drop all KEYWORDS due to broken revdeps
Package-Manager: portage-2.2.14
---
sci-chemistry/cpmgfit/ChangeLog | 3 +++
sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild | 2 +-
2 files changed, 4 insertions(+), 1 deletion(-)
diff --git a/sci-chemistry/cpmgfit/ChangeLog b/sci-chemistry/cpmgfit/ChangeLog
index 7eb5da6..9ada1a2 100644
--- a/sci-chemistry/cpmgfit/ChangeLog
+++ b/sci-chemistry/cpmgfit/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 13 Nov 2014; Justin Lecher <jlec@gentoo.org> cpmgfit-1.43.ebuild:
+ Drop all KEYWORDS due to broken revdeps
+
*cpmgfit-1.43 (03 Jul 2014)
03 Jul 2014; Justin Lecher <jlec@gentoo.org> +cpmgfit-1.43.ebuild,
diff --git a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
index 37c657e..3a35bef 100644
--- a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
+++ b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
@@ -12,7 +12,7 @@ SRC_URI="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.linux.
SLOT="0"
LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS=""
IUSE="examples"
RDEPEND="
^ permalink raw reply related [flat|nested] 4+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/cpmgfit/
@ 2015-03-30 6:03 Justin Lecher
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher @ 2015-03-30 6:03 UTC (permalink / raw
To: gentoo-commits
commit: 0ebfae464a887e256bb79e9a504a703d40f66ee2
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Mar 30 06:00:21 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Mar 30 06:00:21 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=0ebfae46
sci-chemistry/cpmgfit: Fix for new gcc slotting
Package-Manager: portage-2.2.18
sci-chemistry/cpmgfit/ChangeLog | 6 ++++--
sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild | 4 ++--
2 files changed, 6 insertions(+), 4 deletions(-)
diff --git a/sci-chemistry/cpmgfit/ChangeLog b/sci-chemistry/cpmgfit/ChangeLog
index 9ada1a2..a2f40c5 100644
--- a/sci-chemistry/cpmgfit/ChangeLog
+++ b/sci-chemistry/cpmgfit/ChangeLog
@@ -1,7 +1,10 @@
# ChangeLog for sci-chemistry/cpmgfit
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 30 Mar 2015; Justin Lecher <jlec@gentoo.org> cpmgfit-1.43.ebuild:
+ sci-chemistry/cpmgfit: Fix for new gcc slotting
+
13 Nov 2014; Justin Lecher <jlec@gentoo.org> cpmgfit-1.43.ebuild:
Drop all KEYWORDS due to broken revdeps
@@ -10,4 +13,3 @@
03 Jul 2014; Justin Lecher <jlec@gentoo.org> +cpmgfit-1.43.ebuild,
+metadata.xml:
New package written by me
-
diff --git a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
index 3a35bef..0ba9268 100644
--- a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
+++ b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
@@ -17,7 +17,7 @@ IUSE="examples"
RDEPEND="
sci-libs/blas-reference
- sys-devel/gcc:4.1"
+ =sys-devel/gcc-4.1*"
DEPEND="dev-util/patchelf"
S="${WORKDIR}"/linux
^ permalink raw reply related [flat|nested] 4+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-chemistry/cpmgfit/
@ 2021-01-10 18:23 Andrew Ammerlaan
0 siblings, 0 replies; 4+ messages in thread
From: Andrew Ammerlaan @ 2021-01-10 18:23 UTC (permalink / raw
To: gentoo-commits
commit: 41fcd77c8a423f13299f73c0ee07355036ca2048
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sun Jan 10 18:21:36 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sun Jan 10 18:21:36 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=41fcd77c
sci-chemistry/cpmgfit: remove pack, 404, no alternative link
redirects to:
https://www.biochem.cumc.columbia.edu/research-labs/palmer-lab
but can't download from there, no alternative download location
on github, sourceforge or a google search
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild | 48 -------------------------------
sci-chemistry/cpmgfit/metadata.xml | 8 ------
2 files changed, 56 deletions(-)
diff --git a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
deleted file mode 100644
index 0339bc908..000000000
--- a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
+++ /dev/null
@@ -1,48 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit fortran-2 multilib
-
-DESCRIPTION="non-linear least squares fitting of CPMG relaxation dispersion curves"
-HOMEPAGE="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.html"
-SRC_URI="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.linux.tar.gz -> ${P}.tar.gz"
-
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS=""
-IUSE="examples"
-
-RDEPEND="
- sci-libs/blas-reference
- =sys-devel/gcc-4.1*"
-DEPEND="dev-util/patchelf"
-
-S="${WORKDIR}"/linux
-
-QA_PREBUILT="opt/bin/.*"
-
-src_install() {
- local _exe
-
- exeinto /opt/bin
- if use x86; then
- _exe=./linux_32/${PN}
- elif use amd64; then
- _exe=./linux_64/${PN}
- fi
-
- patchelf --set-rpath "${EPREFIX}/opt/${PN}:${EPREFIX}/usr/$(get_libdir)/gcc/x86_64-pc-linux-gnu/4.1.2/" ${_exe}
-
- doexe ${_exe}
-
- dosym ../../usr/$(get_libdir)/librefblas.so /opt/${PN}/libblas.so.3
-
- dohtml ${PN}_manual.html
-
- if use examples; then
- insinto /usr/share/${PN}/examples/
- doins sample*
- fi
-}
diff --git a/sci-chemistry/cpmgfit/metadata.xml b/sci-chemistry/cpmgfit/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/cpmgfit/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-chemistry@gentoo.org</email>
- <name>Gentoo Chemistry Project</name>
- </maintainer>
-</pkgmetadata>
^ permalink raw reply related [flat|nested] 4+ messages in thread
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