[gentoo-commits] proj/sci:master commit in: eclass/

["Justin Lecher" <jlec@gentoo.org>]

commit:     4f3f4bc43e141b4afb302e101a5a3c675fd139d1
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Mar 28 18:27:55 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Mar 28 18:27:55 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=4f3f4bc4

Moved to tree

Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 eclass/emboss-r1.eclass | 133 ------------------------------------------------
 1 file changed, 133 deletions(-)

diff --git a/eclass/emboss-r1.eclass b/eclass/emboss-r1.eclass
deleted file mode 100644
index fc92ce9..0000000
--- a/eclass/emboss-r1.eclass
+++ /dev/null
@@ -1,133 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-# @ECLASS: emboss-r1.eclass
-# @MAINTAINER:
-# sci-biology@gentoo.org
-# jlec@gentoo.org
-# ted.tanberry@gmail.com
-# @AUTHOR:
-# Original author: Author Olivier Fisette <ofisette@gmail.com>
-# Next gen author: Justin Lecher <jlec@gentoo.org>
-# Next gen author: Ted Tanberry <ted.tanberry@gmail.com>
-# @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons).
-# @DESCRIPTION:
-# The inheriting ebuild must set at least EAPI=5 and provide EBO_DESCRIPTION before the inherit line.
-# KEYWORDS should be set. Additionally "(R|P)DEPEND"encies and other standard
-# ebuild variables can be extended (FOO+=" bar").
-#
-# Example:
-#
-# EAPI="5"
-#
-# EBO_DESCRIPTION="applications from the CBS group"
-#
-# inherit emboss-r1
-
-# @ECLASS-VARIABLE: EBO_DESCRIPTION
-# @DESCRIPTION:
-# Should be set. Completes the generic description of the embassy module as follows:
-#
-# EMBOSS integrated version of ${EBO_DESCRIPTION},
-# e.g.
-# "EMBOSS integrated version of applications from the CBS group"
-#
-# Defaults to the upstream name of the module.
-
-# @ECLASS-VARIABLE: EBO_EXTRA_ECONF
-# @DEFAULT_UNSET
-# @DESCRIPTION:
-# Extra config options passed to econf.
-
-case ${EAPI:-0} in
-	5) ;;
-	*) die "this eclass doesn't support < EAPI 5" ;;
-esac
-
-inherit autotools-utils eutils flag-o-matic
-
-HOMEPAGE="http://emboss.sourceforge.net/"
-LICENSE="LGPL-2 GPL-2"
-
-SLOT="0"
-IUSE="mysql pdf png postgres static-libs X"
-
-DEPEND="
-	dev-libs/expat
-	dev-libs/libpcre:3
-	sci-libs/plplot
-	sys-libs/zlib
-	mysql? ( virtual/mysql )
-	pdf? ( media-libs/libharu )
-	png? ( media-libs/gd[png] )
-	postgres? ( dev-db/postgresql:= )
-	X? ( x11-libs/libXt )"
-RDEPEND="${DEPEND}"
-
-if [[ ${PN} == embassy-* ]]; then
-	EMBASSY_PACKAGE=yes
-	# The EMBASSY package name, retrieved from the inheriting ebuild's name
-	EN=${PN:8}
-	# The full name and version of the EMBASSY package (excluding the Gentoo
-	# revision number)
-	EF=$(echo ${EN} | tr "[:lower:]" "[:upper:]")-${PV}
-	: ${EBO_DESCRIPTION:=${EN}}
-	DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}"
-	SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EN}-${PVR}.tar.gz"
-	DEPEND+=" >=sci-biology/emboss-6.6.0[mysql=,pdf=,png=,postgres=,static-libs=,X=]"
-
-	S="${WORKDIR}"/${EF}
-fi
-
-# @FUNCTION: emboss_src_prepare
-# @DESCRIPTION:
-# Does the following things
-#
-#  1. Renames configure.in to configure.ac, if possible
-#  2. Applies ${PATCHES[@]} and runs autotools via autotools-utils.eclass
-#
-
-emboss-r1_src_prepare() {
-	if [[ -e configure.in ]]; then
-		mv configure.{in,ac} || die
-	fi
-
-	autotools-utils_src_prepare
-}
-
-# @FUNCTION: emboss_src_configure
-# @DESCRIPTION:
-# runs econf with following options.
-#
-#  $(use_with X x)
-#  $(use_with png pngdriver)
-#  $(use_with pdf hpdf)
-#  $(use_with mysql mysql)
-#  $(use_with postgres postgresql)
-#  $(use_enable static-libs static)
-#  --enable-large
-#  --without-java
-#  --enable-systemlibs
-#  ${EBO_EXTRA_ECONF}
-
-emboss-r1_src_configure() {
-	local myeconfargs=(
-		$(use_with X x)
-		$(use_with png pngdriver "${EPREFIX}/usr")
-		$(use_with pdf hpdf "${EPREFIX}/usr")
-		$(use_with mysql mysql "${EPREFIX}/usr/bin/mysql_config")
-		$(use_with postgres postgresql "${EPREFIX}/usr/bin/pg_config")
-		--enable-large
-		--without-java
-		--enable-systemlibs
-		${EBO_EXTRA_ECONF}
-	)
-
-	[[ ${EMBASSY_PACKAGE} == yes ]] && \
-		append-cppflags "-I${EPREFIX}/usr/include/emboss"
-
-	autotools-utils_src_configure
-}
-
-EXPORT_FUNCTIONS src_prepare src_configure