From: "Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/transdecoder/
Date: Sat, 10 Jan 2015 01:18:50 +0000 (UTC) [thread overview]
Message-ID: <1420852660.bd7c62b252cc5351963dafbe3473571d8d1fe1c0.mmokrejs@gentoo> (raw)
commit: bd7c62b252cc5351963dafbe3473571d8d1fe1c0
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sat Jan 10 01:17:40 2015 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sat Jan 10 01:17:40 2015 +0000
URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=bd7c62b2
install *.pm into PERL5LIB/TransDecoder and pass that via env.d
Package-Manager: portage-2.2.7
---
sci-biology/transdecoder/ChangeLog | 4 ++++
sci-biology/transdecoder/transdecoder-20140704.ebuild | 6 ++++--
2 files changed, 8 insertions(+), 2 deletions(-)
diff --git a/sci-biology/transdecoder/ChangeLog b/sci-biology/transdecoder/ChangeLog
index c564760..123bd82 100644
--- a/sci-biology/transdecoder/ChangeLog
+++ b/sci-biology/transdecoder/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 10 Jan 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+ transdecoder-20140704.ebuild:
+ install *.pm into PERL5LIB/TransDecoder and pass that via env.d
+
09 Jan 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+files/TransDecoder.patch, +files/pfam_runner.pl.patch,
transdecoder-20140704.ebuild:
diff --git a/sci-biology/transdecoder/transdecoder-20140704.ebuild b/sci-biology/transdecoder/transdecoder-20140704.ebuild
index af5bb4f..c6398f8 100644
--- a/sci-biology/transdecoder/transdecoder-20140704.ebuild
+++ b/sci-biology/transdecoder/transdecoder-20140704.ebuild
@@ -39,9 +39,11 @@ src_install(){
dobin TransDecoder *.pl util/*.pl util/*.sh
eval `perl '-V:installvendorlib'`
vendor_lib_install_dir="${installvendorlib}"
- dodir ${vendor_lib_install_dir}
- insinto ${vendor_lib_install_dir}
+ dodir ${vendor_lib_install_dir}/TransDecoder
+ insinto ${vendor_lib_install_dir}/TransDecoder
doins PerlLib/*.pm
+ echo "PERL5LIB="${vendor_lib_install_dir}"/TransDecoder" > ${S}"/99TransDecoder"
+ doenvd ${S}"/99TransDecoder" || die
einfo "Fetch on your own:"
einfo "wget --mirror -nH -nd http://downloads.sourceforge.net/project/transdecoder/Pfam-AB.hmm.bin"
next reply other threads:[~2015-01-10 1:18 UTC|newest]
Thread overview: 15+ messages / expand[flat|nested] mbox.gz Atom feed top
2015-01-10 1:18 Martin Mokrejs [this message]
-- strict thread matches above, loose matches on Subject: below --
2021-01-19 16:26 [gentoo-commits] proj/sci:master commit in: sci-biology/TransDecoder/ Andrew Ammerlaan
2016-07-11 9:11 Martin Mokrejs
2015-12-25 21:00 Marius Brehler
2015-11-19 20:56 Martin Mokrejs
2015-11-19 20:35 Martin Mokrejs
2015-06-06 10:23 Justin Lecher
2015-04-27 13:04 [gentoo-commits] proj/sci:master commit in: sci-biology/transdecoder/ Martin Mokrejs
2015-04-27 12:49 Martin Mokrejs
2015-04-27 12:48 Martin Mokrejs
2015-04-17 22:21 Martin Mokrejs
2015-03-19 10:47 Martin Mokrejs
2015-03-19 10:37 Martin Mokrejs
2015-02-15 16:57 Martin Mokrejs
2015-01-08 22:35 Martin Mokrejs
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