* [gentoo-commits] proj/sci:master commit in: sci-biology/fastdnaml/
@ 2014-11-10 15:14 Justin Lecher
0 siblings, 0 replies; 3+ messages in thread
From: Justin Lecher @ 2014-11-10 15:14 UTC (permalink / raw
To: gentoo-commits
commit: 08f1d6e7c918030de198ccd353a39146e04d0ce8
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Nov 10 13:10:26 2014 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Nov 10 13:10:26 2014 +0000
URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=08f1d6e7
sci-biology/fastdnaml: Bump EAPI; version Bump
Package-Manager: portage-2.2.14
---
sci-biology/fastdnaml/ChangeLog | 8 +++++-
sci-biology/fastdnaml/fastdnaml-1.2.2.ebuild | 33 ----------------------
sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild | 35 ++++++++++++++++++++++++
sci-biology/fastdnaml/metadata.xml | 10 +++----
4 files changed, 47 insertions(+), 39 deletions(-)
diff --git a/sci-biology/fastdnaml/ChangeLog b/sci-biology/fastdnaml/ChangeLog
index 853bf03..64e9b6b 100644
--- a/sci-biology/fastdnaml/ChangeLog
+++ b/sci-biology/fastdnaml/ChangeLog
@@ -1,7 +1,13 @@
# ChangeLog for sci-biology/fastdnaml
-# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*fastdnaml-1.2.2_p10 (10 Nov 2014)
+
+ 10 Nov 2014; Justin Lecher <jlec@gentoo.org> -fastdnaml-1.2.2.ebuild,
+ +fastdnaml-1.2.2_p10.ebuild, metadata.xml:
+ Bump EAPI; version Bump
+
07 Jul 2008; weaver <weaver@gentoo.org> +metadata.xml,
+fastdnaml-1.2.2.ebuild:
New ebuild, bug 114089
diff --git a/sci-biology/fastdnaml/fastdnaml-1.2.2.ebuild b/sci-biology/fastdnaml/fastdnaml-1.2.2.ebuild
deleted file mode 100644
index f1ca369..0000000
--- a/sci-biology/fastdnaml/fastdnaml-1.2.2.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-inherit eutils
-
-DEB_PATCHLVL=8
-
-DESCRIPTION="Maximum likelihood phylogenetic tree builder for DNA sequences"
-HOMEPAGE="http://directory.fsf.org/project/fastDNAml/"
-SRC_URI="mirror://debian/pool/main/f/fastdnaml/${PN}_${PV}.orig.tar.gz
- mirror://debian/pool/main/f/fastdnaml/${PN}_${PV}-${DEB_PATCHLVL}.diff.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND=""
-
-src_unpack() {
- unpack ${A}
- mv "${WORKDIR}/fastDNAml_${PV}" "${WORKDIR}/${P}"
- epatch "${WORKDIR}/${PN}_${PV}-${DEB_PATCHLVL}.diff"
-}
-
-src_install() {
- mkdir -p "${D}"/usr/{bin,lib/fastdnaml/bin} || die
- emake DESTDIR="${D}" install || die
- dodoc docs/*
- doman debian/fastDNAml.1
-}
diff --git a/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild b/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
new file mode 100644
index 0000000..8b67c3c
--- /dev/null
+++ b/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit eutils
+
+DEB_PATCHLVL=10
+
+DESCRIPTION="Maximum likelihood phylogenetic tree builder for DNA sequences"
+HOMEPAGE="http://directory.fsf.org/project/fastDNAml/"
+SRC_URI="
+ mirror://debian/pool/main/f/fastdnaml/${PN}_${PV%%_p${DEB_PATCHLVL}}.orig.tar.gz
+ mirror://debian/pool/main/f/fastdnaml/${PN}_${PV/_p/-}.debian.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+S="${WORKDIR}"/fastDNAml_${PV/_p/-}
+
+src_prepare() {
+ mv ../debian . || die
+ EPATCH_OPTS="-p1" \
+ epatch debian/patches/*patch
+}
+
+src_install() {
+ dodir /usr/{bin,lib/fastdnaml/bin}
+ default
+ dodoc docs/*
+ doman debian/fastDNAml.1
+}
diff --git a/sci-biology/fastdnaml/metadata.xml b/sci-biology/fastdnaml/metadata.xml
index 3302123..fc7c769 100644
--- a/sci-biology/fastdnaml/metadata.xml
+++ b/sci-biology/fastdnaml/metadata.xml
@@ -1,9 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer>
- <email>weaver@gentoo.org</email>
- <name>Andrey Kislyuk</name>
- </maintainer>
- <herd>sci-biology</herd>
+ <maintainer>
+ <email>weaver@gentoo.org</email>
+ <name>Andrey Kislyuk</name>
+ </maintainer>
+ <herd>sci-biology</herd>
</pkgmetadata>
^ permalink raw reply related [flat|nested] 3+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/fastdnaml/
@ 2021-01-13 21:06 Andrew Ammerlaan
0 siblings, 0 replies; 3+ messages in thread
From: Andrew Ammerlaan @ 2021-01-13 21:06 UTC (permalink / raw
To: gentoo-commits
commit: 67173df94655c0f6110fd1087ec3504ce5e70aee
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Wed Jan 13 20:54:03 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Wed Jan 13 20:54:03 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=67173df9
sci-biology/fastdnaml: use https for homepage
Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild b/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
index bf739d3c6..bda2a666c 100644
--- a/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
+++ b/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -8,7 +8,7 @@ inherit eutils
DEB_PATCHLVL=10
DESCRIPTION="Maximum likelihood phylogenetic tree builder for DNA sequences"
-HOMEPAGE="http://directory.fsf.org/project/fastDNAml/"
+HOMEPAGE="https://directory.fsf.org/wiki/FastDNAml"
SRC_URI="
mirror://debian/pool/main/f/fastdnaml/${PN}_${PV%%_p${DEB_PATCHLVL}}.orig.tar.gz
mirror://debian/pool/main/f/fastdnaml/${PN}_${PV/_p/-}.debian.tar.gz"
^ permalink raw reply related [flat|nested] 3+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/fastdnaml/
@ 2021-03-06 11:04 Andrew Ammerlaan
0 siblings, 0 replies; 3+ messages in thread
From: Andrew Ammerlaan @ 2021-03-06 11:04 UTC (permalink / raw
To: gentoo-commits
commit: 8c1ffa7691ba443546d60a7bbafcb3b3be4e54f6
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Mar 6 10:55:20 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sat Mar 6 10:55:20 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8c1ffa76
sci-biology/fastdnaml: EAPI bump
Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild | 9 +++------
1 file changed, 3 insertions(+), 6 deletions(-)
diff --git a/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild b/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
index bda2a666c..fe4bc2f25 100644
--- a/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
+++ b/sci-biology/fastdnaml/fastdnaml-1.2.2_p10.ebuild
@@ -1,9 +1,7 @@
# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
-
-inherit eutils
+EAPI=7
DEB_PATCHLVL=10
@@ -15,15 +13,14 @@ SRC_URI="
LICENSE="GPL-2"
SLOT="0"
-IUSE=""
KEYWORDS="~amd64 ~x86"
S="${WORKDIR}"/fastDNAml_${PV%_p*}
src_prepare() {
mv ../debian . || die
- EPATCH_OPTS="-p1" \
- epatch debian/patches/*patch
+ default
+ eapply debian/patches/*patch
}
src_install() {
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