From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 8C83A138E74 for ; Tue, 16 Sep 2014 17:01:43 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 0EE3AE0A9B; Tue, 16 Sep 2014 17:01:43 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 3F4E2E0A97 for ; Tue, 16 Sep 2014 17:01:42 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 4E95934027D for ; Tue, 16 Sep 2014 17:01:41 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 053CE5B96 for ; Tue, 16 Sep 2014 17:01:40 +0000 (UTC) From: "Christoph Junghans" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Christoph Junghans" Message-ID: <1410884418.fccbe4ab6a6127316bae390bb0c9d6096e6fd2d5.ottxor@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/fastqc/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/fastqc/ChangeLog sci-biology/fastqc/fastqc-0.10.1.ebuild X-VCS-Directories: sci-biology/fastqc/ X-VCS-Committer: ottxor X-VCS-Committer-Name: Christoph Junghans X-VCS-Revision: fccbe4ab6a6127316bae390bb0c9d6096e6fd2d5 X-VCS-Branch: master Date: Tue, 16 Sep 2014 17:01:40 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: c9a66c29-1261-4591-ba6c-ab40fe0f8cac X-Archives-Hash: a03afeaa9d69d0f82aed640b13ab91c2 commit: fccbe4ab6a6127316bae390bb0c9d6096e6fd2d5 Author: Christoph Junghans gentoo org> AuthorDate: Tue Sep 16 16:20:18 2014 +0000 Commit: Christoph Junghans gentoo org> CommitDate: Tue Sep 16 16:20:18 2014 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=fccbe4ab clean up Package-Manager: portage-2.2.8-r1 --- sci-biology/fastqc/ChangeLog | 3 +++ sci-biology/fastqc/fastqc-0.10.1.ebuild | 2 +- 2 files changed, 4 insertions(+), 1 deletion(-) diff --git a/sci-biology/fastqc/ChangeLog b/sci-biology/fastqc/ChangeLog index 53e3150..42bae79 100644 --- a/sci-biology/fastqc/ChangeLog +++ b/sci-biology/fastqc/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 16 Sep 2014; Christoph Junghans fastqc-0.10.1.ebuild: + clean up + 23 Mar 2014; Martin Mokrejs fastqc-0.10.1.ebuild: sci-biology/fastqc: reverse-engineered where sam-1.32.jar is likely coming diff --git a/sci-biology/fastqc/fastqc-0.10.1.ebuild b/sci-biology/fastqc/fastqc-0.10.1.ebuild index 14bd8ad..3e2b639 100644 --- a/sci-biology/fastqc/fastqc-0.10.1.ebuild +++ b/sci-biology/fastqc/fastqc-0.10.1.ebuild @@ -23,7 +23,7 @@ S="${WORKDIR}"/FastQC src_install(){ dobin fastqc - + # TODO: need to compile java in uk/ac/babraham/FastQC/ # and decide whether jbzip2-0.9.jar is a standard java lib or not # ignore the sam-1.32.jar, that is likely library already in sci-biology/picard