From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 8771F13877A for ; Thu, 3 Jul 2014 08:54:02 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 1E737E08AE; Thu, 3 Jul 2014 08:54:02 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 8DCD9E08AE for ; Thu, 3 Jul 2014 08:54:01 +0000 (UTC) Received: from spoonbill.gentoo.org (spoonbill.gentoo.org [81.93.255.5]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 9541833FDDB for ; Thu, 3 Jul 2014 08:54:00 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by spoonbill.gentoo.org (Postfix) with ESMTP id 5A36E182D3 for ; Thu, 3 Jul 2014 08:53:59 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1404377632.f8cf0af19be4b013e93fa67566f08f292d05d89a.jlec@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-chemistry/cpmgfit/ X-VCS-Repository: proj/sci X-VCS-Files: sci-chemistry/cpmgfit/ChangeLog sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild sci-chemistry/cpmgfit/metadata.xml X-VCS-Directories: sci-chemistry/cpmgfit/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: f8cf0af19be4b013e93fa67566f08f292d05d89a X-VCS-Branch: master Date: Thu, 3 Jul 2014 08:53:59 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 4788a715-55f0-4584-bbb7-48ca53082e22 X-Archives-Hash: ddd829f1cbed53c77d91b14456841ca4 commit: f8cf0af19be4b013e93fa67566f08f292d05d89a Author: Justin Lecher gentoo org> AuthorDate: Thu Jul 3 08:53:52 2014 +0000 Commit: Justin Lecher gentoo org> CommitDate: Thu Jul 3 08:53:52 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f8cf0af1 sci-chemistry/cpmgfit: New package written by me Package-Manager: portage-2.2.10 RepoMan-Options: --force --- sci-chemistry/cpmgfit/ChangeLog | 10 +++++++ sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild | 49 +++++++++++++++++++++++++++++++ sci-chemistry/cpmgfit/metadata.xml | 5 ++++ 3 files changed, 64 insertions(+) diff --git a/sci-chemistry/cpmgfit/ChangeLog b/sci-chemistry/cpmgfit/ChangeLog new file mode 100644 index 0000000..7eb5da6 --- /dev/null +++ b/sci-chemistry/cpmgfit/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-chemistry/cpmgfit +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*cpmgfit-1.43 (03 Jul 2014) + + 03 Jul 2014; Justin Lecher +cpmgfit-1.43.ebuild, + +metadata.xml: + New package written by me + diff --git a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild new file mode 100644 index 0000000..37c657e --- /dev/null +++ b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild @@ -0,0 +1,49 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit fortran-2 multilib + +DESCRIPTION="non-linear least squares fitting of CPMG relaxation dispersion curves" +HOMEPAGE="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.html" +SRC_URI="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.linux.tar.gz -> ${P}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="examples" + +RDEPEND=" + sci-libs/blas-reference + sys-devel/gcc:4.1" +DEPEND="dev-util/patchelf" + +S="${WORKDIR}"/linux + +QA_PREBUILT="opt/bin/.*" + +src_install() { + local _exe + + exeinto /opt/bin + if use x86; then + _exe=./linux_32/${PN} + elif use amd64; then + _exe=./linux_64/${PN} + fi + + patchelf --set-rpath "${EPREFIX}/opt/${PN}:${EPREFIX}/usr/$(get_libdir)/gcc/x86_64-pc-linux-gnu/4.1.2/" ${_exe} + + doexe ${_exe} + + dosym ../../usr/$(get_libdir)/librefblas.so /opt/${PN}/libblas.so.3 + + dohtml ${PN}_manual.html + + if use examples; then + insinto /usr/share/${PN}/examples/ + doins sample* + fi +} diff --git a/sci-chemistry/cpmgfit/metadata.xml b/sci-chemistry/cpmgfit/metadata.xml new file mode 100644 index 0000000..51fdeda --- /dev/null +++ b/sci-chemistry/cpmgfit/metadata.xml @@ -0,0 +1,5 @@ + + + + sci-chemistry +