[gentoo-commits] proj/sci:master commit in: sci-chemistry/cpmgfit/

["Justin Lecher" <jlec@gentoo.org>]

commit:     f8cf0af19be4b013e93fa67566f08f292d05d89a
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Jul  3 08:53:52 2014 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jul  3 08:53:52 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f8cf0af1

sci-chemistry/cpmgfit: New package written by me

Package-Manager: portage-2.2.10
RepoMan-Options: --force

---
 sci-chemistry/cpmgfit/ChangeLog           | 10 +++++++
 sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild | 49 +++++++++++++++++++++++++++++++
 sci-chemistry/cpmgfit/metadata.xml        |  5 ++++
 3 files changed, 64 insertions(+)

diff --git a/sci-chemistry/cpmgfit/ChangeLog b/sci-chemistry/cpmgfit/ChangeLog
new file mode 100644
index 0000000..7eb5da6
--- /dev/null
+++ b/sci-chemistry/cpmgfit/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/cpmgfit
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*cpmgfit-1.43 (03 Jul 2014)
+
+  03 Jul 2014; Justin Lecher <jlec@gentoo.org> +cpmgfit-1.43.ebuild,
+  +metadata.xml:
+  New package written by me
+

diff --git a/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
new file mode 100644
index 0000000..37c657e
--- /dev/null
+++ b/sci-chemistry/cpmgfit/cpmgfit-1.43.ebuild
@@ -0,0 +1,49 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit fortran-2 multilib
+
+DESCRIPTION="non-linear least squares fitting of CPMG relaxation dispersion curves"
+HOMEPAGE="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.html"
+SRC_URI="http://biochemistry.hs.columbia.edu/labs/palmer/software/cpmgfit.linux.tar.gz -> ${P}.tar.gz"
+
+SLOT="0"
+LICENSE="GPL-2"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="examples"
+
+RDEPEND="
+	sci-libs/blas-reference
+	sys-devel/gcc:4.1"
+DEPEND="dev-util/patchelf"
+
+S="${WORKDIR}"/linux
+
+QA_PREBUILT="opt/bin/.*"
+
+src_install() {
+	local _exe
+
+	exeinto /opt/bin
+	if use x86; then
+		_exe=./linux_32/${PN}
+	elif use amd64; then
+		_exe=./linux_64/${PN}
+	fi
+
+	patchelf --set-rpath "${EPREFIX}/opt/${PN}:${EPREFIX}/usr/$(get_libdir)/gcc/x86_64-pc-linux-gnu/4.1.2/" ${_exe}
+
+	doexe ${_exe}
+
+	dosym ../../usr/$(get_libdir)/librefblas.so /opt/${PN}/libblas.so.3
+
+	dohtml ${PN}_manual.html
+
+	if use examples; then
+		insinto /usr/share/${PN}/examples/
+		doins sample*
+	fi
+}

diff --git a/sci-chemistry/cpmgfit/metadata.xml b/sci-chemistry/cpmgfit/metadata.xml
new file mode 100644
index 0000000..51fdeda
--- /dev/null
+++ b/sci-chemistry/cpmgfit/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-chemistry</herd>
+</pkgmetadata>