* [gentoo-commits] proj/sci:master commit in: sci-biology/trf/
@ 2014-04-22 11:58 Martin Mokrejs
0 siblings, 0 replies; 3+ messages in thread
From: Martin Mokrejs @ 2014-04-22 11:58 UTC (permalink / raw
To: gentoo-commits
commit: b137e4268aea18f1169d344b9596339e936a1367
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Apr 22 11:55:04 2014 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Apr 22 11:55:04 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=b137e426
sci-biology/trf-4.07b: version bump; install some HTML helpfiles as well
Package-Manager: portage-2.2.7
---
sci-biology/trf/ChangeLog | 9 +++++++++
sci-biology/trf/metadata.xml | 5 +++++
sci-biology/trf/trf-4.07b.ebuild | 43 ++++++++++++++++++++++++++++++++++++++++
3 files changed, 57 insertions(+)
diff --git a/sci-biology/trf/ChangeLog b/sci-biology/trf/ChangeLog
new file mode 100644
index 0000000..ba7ea8a
--- /dev/null
+++ b/sci-biology/trf/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/trf
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*trf-4.07b (22 Apr 2014)
+
+ 22 Apr 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> +metadata.xml,
+ +trf-4.07b.ebuild:
+ sci-biology/trf-4.07b: version bump; install some HTML helpfiles as well
diff --git a/sci-biology/trf/metadata.xml b/sci-biology/trf/metadata.xml
new file mode 100644
index 0000000..f17a827
--- /dev/null
+++ b/sci-biology/trf/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/trf/trf-4.07b.ebuild b/sci-biology/trf/trf-4.07b.ebuild
new file mode 100644
index 0000000..649d201
--- /dev/null
+++ b/sci-biology/trf/trf-4.07b.ebuild
@@ -0,0 +1,43 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/trf/trf-4.04.ebuild,v 1.6 2014/04/17 21:08:54 ulm Exp $
+
+EAPI=4
+
+inherit eutils
+
+MY_P="${PN}404"
+
+DESCRIPTION="Tandem Repeats Finder"
+HOMEPAGE="http://tandem.bu.edu/trf/trf.html"
+SRC_URI="http://tandem.bu.edu/trf/downloads/${MY_P}.linux
+ http://tandem.bu.edu/trf/trf.unix.help.html
+ http://tandem.bu.edu/trf/trf.definitions.html
+ http://tandem.bu.edu/trf/trf.whatnew.html"
+
+LICENSE="trf" # http://tandem.bu.edu/trf/trf.license.html
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+RESTRICT="mirror bindist"
+
+S="${WORKDIR}"
+
+QA_PREBUILT="opt/${PN}/.*"
+
+src_unpack() {
+ cp "${DISTDIR}/${MY_P}.linux" "${S}/${MY_P}.linux.exe" || die
+}
+
+src_install() {
+ exeinto /opt/${PN}
+ doexe trf404.linux.exe
+ dosym /opt/${PN}/${MY_P}.linux.exe /opt/bin/trf
+ # GTK version (http://tandem.bu.edu/trf/downloads/trf400.linuxgtk.exe) has broken linking
+ #if use gtk; then
+ # doexe trf400.linuxgtk.exe || die
+ # make_desktop_entry /opt/${PN}/trf400.linuxgtk.exe "Tandem Repeats Finder" || die
+ #fi
+ dodoc "${DISTDIR}/"trf.unix.help.html
+ dodoc "${DISTDIR}/"trf.definitions.html
+ dodoc "${DISTDIR}/"trf.whatnew.html
+}
^ permalink raw reply related [flat|nested] 3+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/trf/
@ 2017-11-18 19:49 Justin Lecher
0 siblings, 0 replies; 3+ messages in thread
From: Justin Lecher @ 2017-11-18 19:49 UTC (permalink / raw
To: gentoo-commits
commit: d2181a3a75848a4a26493d8694550c9c7ea5262c
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Nov 18 19:43:41 2017 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Nov 18 19:49:22 2017 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=d2181a3a
sci-biology/trf: Fix repoman warnings
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-biology/trf/trf-4.07b.ebuild | 8 +++-----
1 file changed, 3 insertions(+), 5 deletions(-)
diff --git a/sci-biology/trf/trf-4.07b.ebuild b/sci-biology/trf/trf-4.07b.ebuild
index 51bb494ff..ecfb560b1 100644
--- a/sci-biology/trf/trf-4.07b.ebuild
+++ b/sci-biology/trf/trf-4.07b.ebuild
@@ -1,9 +1,7 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
-
-inherit eutils
+EAPI=6
MY_P="${PN}404"
@@ -31,7 +29,7 @@ src_unpack() {
src_install() {
exeinto /opt/${PN}
doexe trf404.linux.exe
- dosym /opt/${PN}/${MY_P}.linux.exe /opt/bin/trf
+ dosym ../${PN}/${MY_P}.linux.exe /opt/bin/trf
# GTK version (http://tandem.bu.edu/trf/downloads/trf400.linuxgtk.exe) has broken linking
#if use gtk; then
# doexe trf400.linuxgtk.exe
^ permalink raw reply related [flat|nested] 3+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-biology/trf/
@ 2020-09-22 11:12 Aisha Tammy
0 siblings, 0 replies; 3+ messages in thread
From: Aisha Tammy @ 2020-09-22 11:12 UTC (permalink / raw
To: gentoo-commits
commit: 6cce70df9fa162349c2e303818d9dee058944017
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Tue Sep 22 11:10:42 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Tue Sep 22 11:10:42 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=6cce70df
sci-biology/trf: drop package
present in ::gentoo
Package-Manager: Portage-3.0.7, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
sci-biology/trf/metadata.xml | 8 --------
sci-biology/trf/trf-4.07b.ebuild | 42 ----------------------------------------
2 files changed, 50 deletions(-)
diff --git a/sci-biology/trf/metadata.xml b/sci-biology/trf/metadata.xml
deleted file mode 100644
index 8417d1580..000000000
--- a/sci-biology/trf/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
-</pkgmetadata>
diff --git a/sci-biology/trf/trf-4.07b.ebuild b/sci-biology/trf/trf-4.07b.ebuild
deleted file mode 100644
index ecfb560b1..000000000
--- a/sci-biology/trf/trf-4.07b.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-MY_P="${PN}404"
-
-DESCRIPTION="Tandem Repeats Finder"
-HOMEPAGE="http://tandem.bu.edu/trf/trf.html"
-SRC_URI="
- http://tandem.bu.edu/trf/downloads/${MY_P}.linux
- http://tandem.bu.edu/trf/trf.unix.help.html
- http://tandem.bu.edu/trf/trf.definitions.html
- http://tandem.bu.edu/trf/trf.whatnew.html"
-
-LICENSE="trf" # http://tandem.bu.edu/trf/trf.license.html
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-RESTRICT="mirror bindist"
-
-S="${WORKDIR}"
-
-QA_PREBUILT="opt/${PN}/.*"
-
-src_unpack() {
- cp "${DISTDIR}/${MY_P}.linux" "${S}/${MY_P}.linux.exe" || die
-}
-
-src_install() {
- exeinto /opt/${PN}
- doexe trf404.linux.exe
- dosym ../${PN}/${MY_P}.linux.exe /opt/bin/trf
- # GTK version (http://tandem.bu.edu/trf/downloads/trf400.linuxgtk.exe) has broken linking
- #if use gtk; then
- # doexe trf400.linuxgtk.exe
- # make_desktop_entry /opt/${PN}/trf400.linuxgtk.exe "Tandem Repeats Finder" || die
- #fi
- dodoc \
- "${DISTDIR}/"trf.unix.help.html \
- "${DISTDIR}/"trf.definitions.html \
- "${DISTDIR}/"trf.whatnew.html
-}
^ permalink raw reply related [flat|nested] 3+ messages in thread
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