From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 91F161391DB for ; Mon, 24 Mar 2014 00:34:24 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 5C571E0B1F; Mon, 24 Mar 2014 00:34:22 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id E7899E0B1F for ; Mon, 24 Mar 2014 00:34:21 +0000 (UTC) Received: from spoonbill.gentoo.org (spoonbill.gentoo.org [81.93.255.5]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 3AFBE33F8DC for ; Mon, 24 Mar 2014 00:34:20 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by spoonbill.gentoo.org (Postfix) with ESMTP id 02FF8188F1 for ; Mon, 24 Mar 2014 00:34:19 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1395621190.2d2c3a2f74c6633b68cdfad591123bdc24d10935.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/sickle/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/sickle/ChangeLog sci-biology/sickle/metadata.xml sci-biology/sickle/sickle-9999.ebuild X-VCS-Directories: sci-biology/sickle/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 2d2c3a2f74c6633b68cdfad591123bdc24d10935 X-VCS-Branch: master Date: Mon, 24 Mar 2014 00:34:19 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 35afd12b-7c64-49c7-8393-b9b410a37de4 X-Archives-Hash: 28df5f18722207f990d2b4b352f70162 commit: 2d2c3a2f74c6633b68cdfad591123bdc24d10935 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Mon Mar 24 00:33:10 2014 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Mon Mar 24 00:33:10 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2d2c3a2f sci-biology/sickle: new package --- sci-biology/sickle/ChangeLog | 11 +++++++++++ sci-biology/sickle/metadata.xml | 9 +++++++++ sci-biology/sickle/sickle-9999.ebuild | 25 +++++++++++++++++++++++++ 3 files changed, 45 insertions(+) diff --git a/sci-biology/sickle/ChangeLog b/sci-biology/sickle/ChangeLog new file mode 100644 index 0000000..bdbc7e7 --- /dev/null +++ b/sci-biology/sickle/ChangeLog @@ -0,0 +1,11 @@ +# ChangeLog for sci-biology/sickle +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*sickle-9999 (24 Mar 2014) + + 24 Mar 2014; Martin Mokrejs + +sickle-9999.ebuild, +metadata.xml: + simple ebuild, bundled Makefile forces compile flags, program version, but + works + diff --git a/sci-biology/sickle/metadata.xml b/sci-biology/sickle/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/sickle/metadata.xml @@ -0,0 +1,9 @@ + + + + sci-biology + + mmokrejs@fold.natur.cuni.cz + Martin Mokrejs + + diff --git a/sci-biology/sickle/sickle-9999.ebuild b/sci-biology/sickle/sickle-9999.ebuild new file mode 100644 index 0000000..46f0e91 --- /dev/null +++ b/sci-biology/sickle/sickle-9999.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit eutils git-r3 + +DESCRIPTION="Windowed adaptive adaptor trimming tool for FASTQ data from Illumina/Solexa" +HOMEPAGE="https://github.com/najoshi/sickle" +EGIT_REPO_URI="https://github.com/najoshi/sickle" + +LICENSE="sickle" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND} + sys-libs/zlib" + +src_install(){ + dobin sickle + dodoc README.md +}