From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id C82731391DB for ; Sat, 22 Mar 2014 09:45:13 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 44578E0D49; Sat, 22 Mar 2014 09:45:12 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id B4BD1E0D49 for ; Sat, 22 Mar 2014 09:45:11 +0000 (UTC) Received: from spoonbill.gentoo.org (spoonbill.gentoo.org [81.93.255.5]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id EB09F33FBA4 for ; Sat, 22 Mar 2014 09:45:10 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by spoonbill.gentoo.org (Postfix) with ESMTP id 82716188F3 for ; Sat, 22 Mar 2014 09:45:08 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1395481480.34151feaa9a7a76e95c5e1cc72fabc0d52480276.jlec@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/samstat/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/samstat/ChangeLog sci-biology/samstat/metadata.xml sci-biology/samstat/samstat-20130708.ebuild X-VCS-Directories: sci-biology/samstat/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: 34151feaa9a7a76e95c5e1cc72fabc0d52480276 X-VCS-Branch: master Date: Sat, 22 Mar 2014 09:45:08 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: f2b85641-5d79-4bb6-a5c5-845ce0223630 X-Archives-Hash: 8639d1e0633073e4633ceb42ad067ffa commit: 34151feaa9a7a76e95c5e1cc72fabc0d52480276 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Sun Mar 16 19:02:07 2014 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sat Mar 22 09:44:40 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=34151fea sci-biology/samstat: new package Package-Manager: portage-2.2.7 --- sci-biology/samstat/ChangeLog | 9 +++++++++ sci-biology/samstat/metadata.xml | 9 +++++++++ sci-biology/samstat/samstat-20130708.ebuild | 29 +++++++++++++++++++++++++++++ 3 files changed, 47 insertions(+) diff --git a/sci-biology/samstat/ChangeLog b/sci-biology/samstat/ChangeLog new file mode 100644 index 0000000..10d5f58 --- /dev/null +++ b/sci-biology/samstat/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/samstat +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*samstat-20130708 (16 Mar 2014) + + 16 Mar 2014; Martin Mokrejs +metadata.xml, + +samstat-20130708.ebuild: + sci-biology/samstat: new package diff --git a/sci-biology/samstat/metadata.xml b/sci-biology/samstat/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/samstat/metadata.xml @@ -0,0 +1,9 @@ + + + + sci-biology + + mmokrejs@fold.natur.cuni.cz + Martin Mokrejs + + diff --git a/sci-biology/samstat/samstat-20130708.ebuild b/sci-biology/samstat/samstat-20130708.ebuild new file mode 100644 index 0000000..c694799 --- /dev/null +++ b/sci-biology/samstat/samstat-20130708.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit eutils + +DESCRIPTION="Show statistics of BAM/SAM file contents (error profiles, nucleotide composition, base quals, length distribution)" +HOMEPAGE="http://samstat.sourceforge.net" +SRC_URI="http://sourceforge.net/projects/samstat/files/samstat.tgz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/"${PN}"/src + +src_compile(){ + emake +} + +src_install(){ + dobin samstat +}