[gentoo-commits] proj/sci:master commit in: sci-biology/samstat/

["Justin Lecher" <jlec@gentoo.org>]

commit:     34151feaa9a7a76e95c5e1cc72fabc0d52480276
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sun Mar 16 19:02:07 2014 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Mar 22 09:44:40 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=34151fea

sci-biology/samstat: new package

Package-Manager: portage-2.2.7

---
 sci-biology/samstat/ChangeLog               |  9 +++++++++
 sci-biology/samstat/metadata.xml            |  9 +++++++++
 sci-biology/samstat/samstat-20130708.ebuild | 29 +++++++++++++++++++++++++++++
 3 files changed, 47 insertions(+)

diff --git a/sci-biology/samstat/ChangeLog b/sci-biology/samstat/ChangeLog
new file mode 100644
index 0000000..10d5f58
--- /dev/null
+++ b/sci-biology/samstat/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/samstat
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*samstat-20130708 (16 Mar 2014)
+
+  16 Mar 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> +metadata.xml,
+  +samstat-20130708.ebuild:
+  sci-biology/samstat: new package

diff --git a/sci-biology/samstat/metadata.xml b/sci-biology/samstat/metadata.xml
new file mode 100644
index 0000000..2bc8930
--- /dev/null
+++ b/sci-biology/samstat/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-biology</herd>
+  <maintainer>
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+</pkgmetadata>

diff --git a/sci-biology/samstat/samstat-20130708.ebuild b/sci-biology/samstat/samstat-20130708.ebuild
new file mode 100644
index 0000000..c694799
--- /dev/null
+++ b/sci-biology/samstat/samstat-20130708.ebuild
@@ -0,0 +1,29 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit eutils
+
+DESCRIPTION="Show statistics of BAM/SAM file contents (error profiles, nucleotide composition, base quals, length distribution)"
+HOMEPAGE="http://samstat.sourceforge.net"
+SRC_URI="http://sourceforge.net/projects/samstat/files/samstat.tgz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}"/"${PN}"/src
+
+src_compile(){
+	emake
+}
+
+src_install(){
+	dobin samstat
+}