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Mon, 6 Jan 2014 17:18:32 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1389023716.2d443cdf793ac3a5ae7f3b1fb8eb0df7a3579a5b.jlec@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/genepop/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/genepop/ChangeLog sci-biology/genepop/genepop-4.0.10.ebuild sci-biology/genepop/genepop-4.2.1.ebuild sci-biology/genepop/metadata.xml X-VCS-Directories: sci-biology/genepop/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: 2d443cdf793ac3a5ae7f3b1fb8eb0df7a3579a5b X-VCS-Branch: master Date: Mon, 6 Jan 2014 17:18:32 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 30657a5e-8428-4c96-817a-27fb669ef9ef X-Archives-Hash: eee8592efe639da8d5bcd35cba4c0df7 commit: 2d443cdf793ac3a5ae7f3b1fb8eb0df7a3579a5b Author: Justin Lecher gentoo org> AuthorDate: Mon Jan 6 15:55:16 2014 +0000 Commit: Justin Lecher gentoo org> CommitDate: Mon Jan 6 15:55:16 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2d443cdf sci-biology/genepop: Punt base.eclass: version bump Package-Manager: portage-2.2.8 --- sci-biology/genepop/ChangeLog | 6 ++++- ...{genepop-4.0.10.ebuild => genepop-4.2.1.ebuild} | 31 +++++++++------------- sci-biology/genepop/metadata.xml | 10 +++---- 3 files changed, 23 insertions(+), 24 deletions(-) diff --git a/sci-biology/genepop/ChangeLog b/sci-biology/genepop/ChangeLog index 7490dc2..9eee0f1 100644 --- a/sci-biology/genepop/ChangeLog +++ b/sci-biology/genepop/ChangeLog @@ -1,7 +1,11 @@ # ChangeLog for sci-biology/genepop -# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 06 Jan 2014; Justin Lecher -genepop-4.0.10.ebuild, + +genepop-4.2.1.ebuild, metadata.xml: + Punt base.eclass: version bump + 26 Sep 2009; Andrey Kislyuk ChangeLog: New package, ebuild written by me diff --git a/sci-biology/genepop/genepop-4.0.10.ebuild b/sci-biology/genepop/genepop-4.2.1.ebuild similarity index 50% rename from sci-biology/genepop/genepop-4.0.10.ebuild rename to sci-biology/genepop/genepop-4.2.1.ebuild index d034a34..ef61b20 100644 --- a/sci-biology/genepop/genepop-4.0.10.ebuild +++ b/sci-biology/genepop/genepop-4.2.1.ebuild @@ -1,14 +1,14 @@ -# Copyright 1999-2009 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild,v 1.2 2009/08/19 08:00:26 weaver Exp $ -EAPI="2" +EAPI=5 -inherit base toolchain-funcs +inherit cmake-utils DESCRIPTION="Population genetics analysis" HOMEPAGE="http://genepop.curtin.edu.au/ http://kimura.univ-montp2.fr/~rousset/Genepop.htm" -SRC_URI="mirror://gentoo/${P}.zip" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.gz" LICENSE="CeCILL-2" SLOT="0" @@ -20,20 +20,15 @@ RDEPEND="" S="${WORKDIR}" -src_unpack() { - base_src_unpack - unzip -d "${S}" sources.zip - mkdir "${S}/examples" - unzip -d "${S}/examples" examples.zip -} +src_prepare() { + cat >> CMakeLists.txt <<- EOF + cmake_minimum_required (VERSION 2.6) + project (${PN} CXX) -src_compile() { - $(tc-getCXX) ${CFLAGS} -DNO_MODULES -o Genepop GenepopS.cpp -O3 || die -} + set(CMAKE_CXX_FLAGS "\${CMAKE_CXX_FLAGS} -DNO_MODULES") -src_install() { - dobin Genepop || die - insinto /usr/share/${PN} - doins -r examples || die - dodoc Genepop.pdf + add_executable(Genepop GenepopS.cpp) + install(TARGETS Genepop DESTINATION bin) + EOF + cmake-utils_src_prepare } diff --git a/sci-biology/genepop/metadata.xml b/sci-biology/genepop/metadata.xml index 3302123..fc7c769 100644 --- a/sci-biology/genepop/metadata.xml +++ b/sci-biology/genepop/metadata.xml @@ -1,9 +1,9 @@ - - weaver@gentoo.org - Andrey Kislyuk - - sci-biology + + weaver@gentoo.org + Andrey Kislyuk + + sci-biology