[gentoo-commits] proj/sci:master commit in: sci-physics/root/

["Justin Lecher" <jlec@gentoo.org>]

commit:     632aa3b7301d190f7831def9cff67ccde65b67bd
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Dec 28 23:51:45 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Dec 28 23:51:45 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=632aa3b7

sci-physics/root: Import tree changes, drop old

Package-Manager: portage-2.2.7

---
 sci-physics/root/ChangeLog              |   4 +
 sci-physics/root/root-5.32.03-r2.ebuild | 383 ----------------------------
 sci-physics/root/root-5.34.13.ebuild    | 425 --------------------------------
 sci-physics/root/root-9999.ebuild       |  17 +-
 4 files changed, 14 insertions(+), 815 deletions(-)

diff --git a/sci-physics/root/ChangeLog b/sci-physics/root/ChangeLog
index 848c446..c7010f7 100644
--- a/sci-physics/root/ChangeLog
+++ b/sci-physics/root/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: /var/cvsroot/gentoo-x86/sci-physics/root/ChangeLog,v 1.96 2012/03/29 18:21:49 bicatali Exp $
 
+  28 Dec 2013; Justin Lecher <jlec@gentoo.org> -root-5.32.03-r2.ebuild,
+  -root-5.34.13.ebuild, root-9999.ebuild:
+  Import tree changes, drop old
+
   22 Dec 2013; Andrew Savchenko <bircoph@gmail.com> +root-5.32.03-r2.ebuild,
   +files/root-5.28.00b-asneeded.patch, +files/root-5.28.00b-prop-ldflags.patch,
   +files/root-5.28.00b-unuran.patch,

diff --git a/sci-physics/root/root-5.32.03-r2.ebuild b/sci-physics/root/root-5.32.03-r2.ebuild
deleted file mode 100644
index 979b753..0000000
--- a/sci-physics/root/root-5.32.03-r2.ebuild
+++ /dev/null
@@ -1,383 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/root-5.32.03-r2.ebuild,v 1.6 2013/03/02 23:27:01 hwoarang Exp $
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_{6,7} )
-
-if [[ ${PV} == "9999" ]] ; then
-	_SVN=subversion
-	ESVN_REPO_URI="https://root.cern.ch/svn/root/trunk"
-	ESVN_OPTIONS="--non-interactive --trust-server-cert"
-	SRC_URI=""
-	KEYWORDS=""
-else
-	SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
-	KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-fi
-
-inherit elisp-common eutils fdo-mime fortran-2 multilib python-single-r1 toolchain-funcs user ${_SVN}
-
-ROOFIT_DOC_PV=2.91-33
-TMVA_DOC_PV=4.03
-PATCH_PV=5.28.00b
-PATCH_PV2=5.32.00
-
-DESCRIPTION="C++ data analysis framework and interpreter from CERN"
-HOMEPAGE="http://root.cern.ch/"
-SRC_URI="${SRC_URI}
-	doc? ( ftp://root.cern.ch/${PN}/doc/ROOTUsersGuide.pdf
-		math? (
-			ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
-			http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf )
-		htmldoc? (
-			http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
-			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
-			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/info.png ) )"
-
-SLOT="0"
-LICENSE="LGPL-2.1"
-IUSE="+X afs avahi clarens doc emacs examples fits fftw graphviz htmldoc kerberos
-	ldap +math mpi mysql odbc +opengl openmp oracle postgres prefix pythia6
-	pythia8 python qt4 +reflex ruby ssl xinetd xml xrootd"
-
-CDEPEND="
-	app-arch/xz-utils
-	>=dev-lang/cfortran-4.4-r2
-	dev-libs/libpcre
-	media-fonts/dejavu
-	media-libs/freetype
-	media-libs/giflib
-	media-libs/libpng:0
-	media-libs/tiff:0
-	sys-libs/zlib
-	virtual/jpeg
-	virtual/shadow
-	X? (
-		media-libs/ftgl
-		media-libs/glew
-		x11-libs/libX11
-		x11-libs/libXext
-		x11-libs/libXpm
-		|| (
-			>=media-libs/libafterimage-1.20[gif,jpeg,png,tiff]
-			>=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff]
-		)
-		opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps )
-		qt4? (
-			dev-qt/qtgui:4
-			dev-qt/qtopengl:4
-			dev-qt/qt3support:4
-			dev-qt/qtsvg:4
-			dev-qt/qtwebkit:4
-			dev-qt/qtxmlpatterns:4 )
-		x11-libs/libXft
-		)
-	afs? ( net-fs/openafs )
-	avahi? ( net-dns/avahi )
-	clarens? ( dev-libs/xmlrpc-c[curl] )
-	emacs? ( virtual/emacs )
-	fits? ( sci-libs/cfitsio )
-	fftw? ( sci-libs/fftw:3.0 )
-	graphviz? ( media-gfx/graphviz )
-	kerberos? ( virtual/krb5 )
-	ldap? ( net-nds/openldap )
-	math? ( sci-libs/gsl sci-mathematics/unuran mpi? ( virtual/mpi ) )
-	mysql? ( virtual/mysql )
-	odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
-	oracle? ( dev-db/oracle-instantclient-basic )
-	postgres? ( dev-db/postgresql-base )
-	pythia6? ( sci-physics/pythia:6 )
-	pythia8? ( <sci-physics/pythia-8.1.80:8 )
-	python? ( ${PYTHON_DEPS} )
-	ruby? (
-			dev-lang/ruby
-			dev-ruby/rubygems )
-	ssl? ( dev-libs/openssl )
-	xml? ( dev-libs/libxml2 )
-	xrootd? ( <net-libs/xrootd-3.3 )"
-
-DEPEND="${CDEPEND}
-	virtual/pkgconfig"
-
-RDEPEND="${CDEPEND}
-	reflex? ( dev-cpp/gccxml )
-	xinetd? ( sys-apps/xinetd )"
-
-PDEPEND="htmldoc? ( ~app-doc/root-docs-${PV} )"
-
-REQUIRED_USE="
-	!X? ( !opengl !qt4 )
-	mpi? ( math !openmp )
-	openmp? ( math !mpi )
-	python? ( ${PYTHON_REQUIRED_USE} )"
-
-S="${WORKDIR}/${PN}"
-
-pkg_setup() {
-	fortran-2_pkg_setup
-	use python && python-single-r1_pkg_setup
-	echo
-	elog "There are extra options on packages not yet in Gentoo:"
-	elog "AliEn, castor, Chirp, dCache, gfal, gLite, Globus,"
-	elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
-	elog "You can use the env variable EXTRA_ECONF variable for this."
-	elog "For example, for SRP, you would set: "
-	elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=/usr/$(get_libdir)\""
-	echo
-	enewgroup rootd
-	enewuser rootd -1 -1 /var/spool/rootd rootd
-
-	if use math; then
-		if use openmp; then
-			if [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp; then
-				ewarn "You are using a gcc without OpenMP capabilities"
-				die "Need an OpenMP capable compiler"
-			else
-				export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
-			fi
-		elif use mpi; then
-			export USE_MPI=1 USE_PARALLEL_MINUIT2=1
-		fi
-	fi
-}
-
-src_prepare() {
-	epatch \
-		"${FILESDIR}"/${PN}-${PATCH_PV}-prop-ldflags.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV}-asneeded.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-nobyte-compile.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV}-glibc212.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV}-unuran.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-afs.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-cfitsio.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-chklib64.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-explicit-functions.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-dotfont.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-rmkdepend.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-rusage.patch
-
-	# make sure we use system libs and headers
-	rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
-	rm -rf graf2d/asimage/src/libAfterImage || die
-	rm -rf graf3d/ftgl/{inc,src} || die
-	rm -rf graf2d/freetype/src || die
-	rm -rf graf3d/glew/{inc,src} || die
-	rm -rf core/pcre/src || die
-	rm -rf math/unuran/src/unuran-*.tar.gz || die
-	LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | xargs -0 rm -f || die
-	rm -rf core/lzma/src/*.tar.gz || die
-	rm graf3d/gl/{inc,src}/gl2ps.* || die
-	sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' graf3d/gl/Module.mk || die
-
-	# In Gentoo, libPythia6 is called libpythia6
-	# libungif is called libgif,
-	# iodbc is in /usr/include/iodbc
-	# pg_config.h is checked instead of libpq-fe.h
-	sed -i \
-		-e 's:libPythia6:libpythia6:g' \
-		-e 's:ungif:gif:g' \
-		-e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
-		-e 's:libpq-fe.h:pg_config.h:' \
-		configure || die "adjusting configure for Gentoo failed"
-
-	# prefixify the configure script
-	sed -i \
-		-e 's:/usr:${EPREFIX}/usr:g' \
-		configure || die "prefixify configure failed"
-
-	# QTDIR only used for qt3 in gentoo, and configure looks for it.
-	unset QTDIR
-
-	# Make html docs self-consistent for offline work (based on Fedora spec)
-	if use htmldoc; then
-		epatch "${FILESDIR}"/${PN}-${PATCH_PV2}-htmldoc.patch
-		# make images local
-		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/!!' \
-			-i etc/html/ROOT.css || die "htmldoc sed failed"
-		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/!!' \
-			-i etc/html/ROOT.css || die "htmldoc sed failed"
-		sed 's!http://root.cern.ch/drupal/sites/default/files/!!' \
-			-i etc/html/header.html || die "htmldoc sed failed"
-
-		cp "${DISTDIR}"/{rootdrawing-logo.png,root-banner.png,info.png} etc/html ||
-			die "htmldoc preparation failed"
-	fi
-}
-
-src_configure() {
-	# the configure script is not the standard autotools
-	./configure \
-		--prefix="${EPREFIX}"/usr \
-		--etcdir="${EPREFIX}"/etc/root \
-		--libdir="${EPREFIX}"/usr/$(get_libdir)/${PN} \
-		--docdir="${EPREFIX}"/usr/share/doc/${PF} \
-		--tutdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tutorials \
-		--testdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tests \
-		--with-cc=$(tc-getCC) \
-		--with-cxx=$(tc-getCXX) \
-		--with-f77=$(tc-getFC) \
-		--with-ld=$(tc-getCXX) \
-		--with-afs-shared=yes \
-		--with-sys-iconpath="${EPREFIX}"/usr/share/pixmaps \
-		--disable-builtin-afterimage \
-		--disable-builtin-freetype \
-		--disable-builtin-ftgl \
-		--disable-builtin-glew \
-		--disable-builtin-pcre \
-		--disable-builtin-zlib \
-		--disable-builtin-lzma \
-		--disable-cling \
-		--enable-astiff \
-		--enable-exceptions	\
-		--enable-explicitlink \
-		--enable-gdml \
-		--enable-memstat \
-		--enable-shadowpw \
-		--enable-shared	\
-		--enable-soversion \
-		--enable-table \
-		--fail-on-missing \
-		$(use_enable X x11) \
-		$(use_enable X asimage) \
-		$(use_enable afs) \
-		$(use_enable avahi bonjour) \
-		$(use_enable clarens) \
-		$(use_enable clarens peac) \
-		$(use_enable fits fitsio) \
-		$(use_enable fftw fftw3) \
-		$(use_enable graphviz gviz) \
-		$(use_enable kerberos krb5) \
-		$(use_enable ldap) \
-		$(use_enable math gsl-shared) \
-		$(use_enable math genvector) \
-		$(use_enable math mathmore) \
-		$(use_enable math minuit2) \
-		$(use_enable math roofit) \
-		$(use_enable math tmva) \
-		$(use_enable math unuran) \
-		$(use_enable mysql) \
-		$(use_enable odbc) \
-		$(use_enable opengl) \
-		$(use_enable postgres pgsql) \
-		$(usex postgres "--with-pgsql-incdir=$(pg_config --includedir)" "") \
-		$(use_enable prefix rpath) \
-		$(use_enable pythia6) \
-		$(use_enable pythia8) \
-		$(use_enable python) \
-		$(use_enable qt4 qt) \
-		$(use_enable qt4 qtgsi) \
-		$(use_enable reflex cintex) \
-		$(use_enable reflex) \
-		$(use_enable ruby) \
-		$(use_enable ssl) \
-		$(use_enable xml) \
-		$(use_enable xrootd) \
-		${EXTRA_ECONF} \
-		|| die "configure failed"
-}
-
-src_compile() {
-	emake OPT="${CXXFLAGS}" F77OPT="${FFLAGS}"
-	if use emacs; then
-		elisp-compile build/misc/*.el || die "elisp-compile failed"
-	fi
-}
-
-doc_install() {
-	cd "${S}"
-	if use doc; then
-		einfo "Installing user's guides"
-		dodoc "${DISTDIR}"/ROOTUsersGuide.pdf
-		use math && dodoc \
-			"${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
-			"${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
-	fi
-
-	if use examples; then
-		# these should really be taken care of by the root make install
-		insinto /usr/share/doc/${PF}/examples/tutorials/tmva
-		doins -r tmva/test
-	else
-		rm -rf "${ED}"/usr/share/doc/${PF}/examples || die
-	fi
-}
-
-daemon_install() {
-	cd "${S}"
-	local daemons="rootd proofd"
-	dodir /var/spool/rootd
-	fowners rootd:rootd /var/spool/rootd
-	dodir /var/spool/rootd/{pub,tmp}
-	fperms 1777 /var/spool/rootd/{pub,tmp}
-
-	for i in ${daemons}; do
-		newinitd "${FILESDIR}"/${i}.initd ${i}
-		newconfd "${FILESDIR}"/${i}.confd ${i}
-	done
-	if use xinetd; then
-		insinto /etc/xinetd
-		doins etc/daemons/{rootd,proofd}.xinetd
-	fi
-}
-
-desktop_install() {
-	cd "${S}"
-	sed -e 's,@prefix@,/usr,' \
-		build/package/debian/root-system-bin.desktop.in > root.desktop
-	domenu root.desktop
-	doicon "${S}"/build/package/debian/root-system-bin.png
-
-	insinto /usr/share/icons/hicolor/48x48/mimetypes
-	doins build/package/debian/application-x-root.png
-
-	insinto /usr/share/icons/hicolor/48x48/apps
-	doicon build/package/debian/root-system-bin.xpm
-}
-
-src_install() {
-	emake DESTDIR="${D}" install
-
-	echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/root" > 99root
-	use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
-	if use python; then
-		echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
-		python_optimize "${D}/usr/$(get_libdir)/root"
-	fi
-	use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
-	doenvd 99root
-
-	# The build system installs Emacs support unconditionally and in the wrong
-	# directory. Remove it and call elisp-install in case of USE=emacs.
-	rm -rf "${ED}"/usr/share/emacs
-	if use emacs; then
-		elisp-install ${PN} build/misc/*.{el,elc} || die "elisp-install failed"
-	fi
-
-	doc_install
-	daemon_install
-	desktop_install
-
-	# Cleanup of files either already distributed or unused on Gentoo
-	rm "${ED}"usr/share/doc/${PF}/{INSTALL,LICENSE,COPYING.CINT} || die
-	rm "${ED}"usr/share/root/fonts/LICENSE || die
-	pushd "${ED}"usr/$(get_libdir)/root/cint/cint/lib > /dev/null
-	rm -f posix/mktypes dll_stl/setup \
-		G__* dll_stl/G__* dll_stl/rootcint_* posix/exten.o || die
-	rm -f "${ED}"usr/$(get_libdir)/root/cint/cint/include/makehpib || die
-	rm -f "${ED}"/etc/root/proof/*.sample || die
-	rm -rf "${ED}"/etc/root/daemons || die
-	popd > /dev/null
-	# these should be in PATH
-	mv "${ED}"etc/root/proof/utils/pq2/pq2* \
-		"${ED}"usr/bin/ || die
-}
-
-pkg_postinst() {
-	fdo-mime_desktop_database_update
-}
-
-pkg_postrm() {
-	fdo-mime_desktop_database_update
-}

diff --git a/sci-physics/root/root-5.34.13.ebuild b/sci-physics/root/root-5.34.13.ebuild
deleted file mode 100644
index f8e0f1a..0000000
--- a/sci-physics/root/root-5.34.13.ebuild
+++ /dev/null
@@ -1,425 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/root-5.34.10-r2.ebuild,v 1.1 2013/10/29 17:00:37 bicatali Exp $
-
-EAPI=5
-
-if [[ ${PV} == "9999" ]] ; then
-	_GIT=git-2
-	EGIT_REPO_URI="http://root.cern.ch/git/root.git"
-	SRC_URI=""
-	KEYWORDS=""
-else
-	SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
-	KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-fi
-
-PYTHON_COMPAT=( python2_{6,7} )
-inherit elisp-common eutils fdo-mime fortran-2 ${_GIT} multilib python-single-r1 toolchain-funcs user versionator
-
-ROOFIT_DOC_PV=2.91-33
-TMVA_DOC_PV=4.03
-PATCH_PV=5.28.00b
-PATCH_PV2=5.32.00
-PATCH_PV3=5.34.05
-PATCH_PV4=5.34.13
-
-DESCRIPTION="C++ data analysis framework and interpreter from CERN"
-HOMEPAGE="http://root.cern.ch/"
-SRC_URI="${SRC_URI}
-	!minimal? ( doc? (
-		math? (
-			ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
-			http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
-			metric? ( ftp://root.cern.ch/root/doc/spectrum/Spectrum.pdf -> Spectrum-${PV}.pdf )
-			!metric? ( ftp://root.cern.ch/root/doc/spectrum/SpectrumLetter.pdf -> SpectrumLetter-${PV}.pdf )
-		)
-		metric? (
-			ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideA4.pdf -> ROOTUsersGuideA4-${PV}.pdf
-			ftp://root.cern.ch/root/doc/primer/ROOTPrimer.pdf -> ROOTPrimer-${PV}.pdf )
-	   !metric? (
-			ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideLetter.pdf -> ROOTUsersGuideLetter-${PV}.pdf
-			ftp://root.cern.ch/root/doc/primer/ROOTPrimerLetter.pdf -> ROOTPrimerLetter-${PV}.pdf )
-		htmldoc? (
-			http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
-			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
-			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/info.png )
-	) )"
-
-SLOT="0"
-LICENSE="LGPL-2.1"
-IUSE="+X afs avahi c++0x doc emacs examples fits fftw graphviz htmldoc
-	kerberos ldap +math +metric minimal mpi mysql odbc +opengl openmp oracle postgres
-	prefix pythia6 pythia8 python qt4 +reflex ruby sqlite ssl xinetd xml xrootd"
-
-REQUIRED_USE="
-	!X? ( !opengl !qt4 )
-	htmldoc? ( doc )
-	mpi? ( math !openmp )
-	openmp? ( math !mpi )
-	python? ( ${PYTHON_REQUIRED_USE} )"
-
-CDEPEND="
-	app-arch/xz-utils
-	>=dev-lang/cfortran-4.4-r2
-	dev-libs/libpcre
-	media-fonts/dejavu
-	media-libs/freetype
-	media-libs/giflib
-	media-libs/libpng:0
-	media-libs/tiff:0
-	sys-libs/zlib
-	virtual/jpeg
-	virtual/shadow
-	X? (
-		media-libs/ftgl
-		media-libs/glew
-		x11-libs/libX11
-		x11-libs/libXext
-		x11-libs/libXpm
-		!minimal? (
-			|| (
-				>=media-libs/libafterimage-1.20[gif,jpeg,png,tiff]
-				>=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff]
-			)
-			opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps )
-			qt4? (
-				dev-qt/qtgui:4
-				dev-qt/qtopengl:4
-				dev-qt/qt3support:4
-				dev-qt/qtsvg:4
-				dev-qt/qtwebkit:4
-				dev-qt/qtxmlpatterns:4
-			)
-			x11-libs/libXft
-		)
-	)
-	!minimal? (
-		afs? ( net-fs/openafs )
-		avahi? ( net-dns/avahi )
-		emacs? ( virtual/emacs )
-		fits? ( sci-libs/cfitsio )
-		fftw? ( sci-libs/fftw:3.0 )
-		graphviz? ( media-gfx/graphviz )
-		kerberos? ( virtual/krb5 )
-		ldap? ( net-nds/openldap )
-		math? ( sci-libs/gsl sci-mathematics/unuran mpi? ( virtual/mpi ) )
-		mysql? ( virtual/mysql )
-		odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
-		oracle? ( dev-db/oracle-instantclient-basic )
-		postgres? ( dev-db/postgresql-base )
-		pythia6? ( sci-physics/pythia:6 )
-		pythia8? ( >=sci-physics/pythia-8.1.80:8 )
-		python? ( ${PYTHON_DEPS} )
-		ruby? (
-				dev-lang/ruby
-				dev-ruby/rubygems )
-		sqlite? ( dev-db/sqlite:3 )
-		ssl? ( dev-libs/openssl )
-		xml? ( dev-libs/libxml2 )
-		xrootd? ( >=net-libs/xrootd-3.2.0 )
-	)"
-
-DEPEND="${CDEPEND}
-	virtual/pkgconfig"
-
-RDEPEND="${CDEPEND}
-	reflex? ( dev-cpp/gccxml )
-	xinetd? ( sys-apps/xinetd )"
-
-PDEPEND="htmldoc? ( ~app-doc/root-docs-${PV} )"
-
-S="${WORKDIR}/${PN}"
-
-pkg_setup() {
-	fortran-2_pkg_setup
-	use python && python-single-r1_pkg_setup
-	echo
-	elog "There are extra options on packages not yet in Gentoo:"
-	elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
-	elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
-	elog "You can use the env variable EXTRA_ECONF variable for this."
-	elog "For example, for SRP, you would set: "
-	elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
-	echo
-	enewgroup rootd
-	enewuser rootd -1 -1 /var/spool/rootd rootd
-	use minimal && return
-
-	if use math; then
-		if use openmp; then
-			if [[ $(tc-getCXX)$ == *g++* ]] && ! tc-has-openmp; then
-				ewarn "You are using a g++ without OpenMP capabilities"
-				die "Need an OpenMP capable compiler"
-			else
-				export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
-			fi
-		elif use mpi; then
-			export USE_MPI=1 USE_PARALLEL_MINUIT2=1
-		fi
-	fi
-	if use c++0x && [[ $(tc-getCXX) == *g++* ]] && \
-		! version_is_at_least "4.7" "$(gcc-version)"; then
-		eerror "You are using a g++ without C++0x capabilities"
-		die "Need an C++0x capable compiler"
-	fi
-}
-
-src_prepare() {
-	epatch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-prop-flags.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV3}-nobyte-compile.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV}-glibc212.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV4}-unuran.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-afs.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-cfitsio.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-chklib64.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV2}-dotfont.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV4}-pythia8.patch \
-		"${FILESDIR}"/${PN}-${PATCH_PV4}-desktop.patch
-
-	# make sure we use system libs and headers
-	rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
-	rm -r graf2d/asimage/src/libAfterImage || die
-	rm -r graf3d/ftgl/{inc,src} || die
-	rm -r graf2d/freetype/src || die
-	rm -r graf3d/glew/{inc,src} || die
-	rm -r core/pcre/src || die
-	rm -r math/unuran/src/unuran-*.tar.gz || die
-	LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | xargs -0 rm -f || die
-	rm -r core/lzma/src/*.tar.gz || die
-	rm graf3d/gl/{inc,src}/gl2ps.* || die
-	sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' graf3d/gl/Module.mk || die
-
-	# In Gentoo, libPythia6 is called libpythia6
-	# libungif is called libgif,
-	# iodbc is in /usr/include/iodbc
-	# pg_config.h is checked instead of libpq-fe.h
-	sed -i \
-		-e 's:libPythia6:libpythia6:g' \
-		-e 's:ungif:gif:g' \
-		-e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
-		-e 's:libpq-fe.h:pg_config.h:' \
-		configure || die "adjusting configure for Gentoo failed"
-
-	# prefixify the configure script
-	sed -i \
-		-e 's:/usr:${EPREFIX}/usr:g' \
-		configure || die "prefixify configure failed"
-
-	# QTDIR only used for qt3 in gentoo, and configure looks for it.
-	unset QTDIR
-
-	# Make html docs self-consistent for offline work (based on Fedora spec)
-	if use htmldoc && ! use minimal; then
-		epatch "${FILESDIR}"/${PN}-${PATCH_PV2}-htmldoc.patch
-		# make images local
-		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/!!' \
-			-i etc/html/ROOT.css || die "htmldoc sed failed"
-		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/!!' \
-			-i etc/html/ROOT.css || die "htmldoc sed failed"
-		sed 's!http://root.cern.ch/drupal/sites/default/files/!!' \
-			-i etc/html/header.html || die "htmldoc sed failed"
-
-		cp "${DISTDIR}"/{rootdrawing-logo.png,root-banner.png,info.png} etc/html ||
-			die "htmldoc preparation failed"
-	fi
-}
-
-src_configure() {
-	# the configure script is not the standard autotools
-	local mycommonconf="
-		--prefix="${EPREFIX}"/usr \
-		--etcdir="${EPREFIX}"/etc/root \
-		--libdir="${EPREFIX}"/usr/$(get_libdir)/${PN} \
-		--docdir="${EPREFIX}"/usr/share/doc/${PF} \
-		--tutdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tutorials \
-		--testdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tests \
-		--with-cc=$(tc-getCC) \
-		--with-cxx=$(tc-getCXX) \
-		--with-f77=$(tc-getFC) \
-		--with-ld=$(tc-getCXX) \
-		--nohowto
-	"
-	if use minimal; then
-		./configure \
-			${mycommonconf} \
-			$(usex X --gminimal --minimal) \
-			|| die "configure failed"
-		return
-	fi
-	# cling is disabled because in requires live llvm and clang
-	./configure \
-		${mycommonconf} \
-		--with-afs-shared=yes \
-		--with-sys-iconpath="${EPREFIX}"/usr/share/pixmaps \
-		--disable-builtin-afterimage \
-		--disable-builtin-ftgl \
-		--disable-builtin-freetype \
-		--disable-builtin-glew \
-		--disable-builtin-pcre \
-		--disable-builtin-zlib \
-		--disable-builtin-lzma \
-		--disable-cling \
-		--enable-astiff \
-		--enable-explicitlink \
-		--enable-gdml \
-		--enable-memstat \
-		--enable-shadowpw \
-		--enable-shared	\
-		--enable-soversion \
-		--enable-table \
-		--fail-on-missing \
-		$(use_enable X x11) \
-		$(use_enable X asimage) \
-		$(use_enable X xft) \
-		$(use_enable afs) \
-		$(use_enable avahi bonjour) \
-		$(use_enable c++0x cxx11) \
-		$(use_enable fits fitsio) \
-		$(use_enable fftw fftw3) \
-		$(use_enable graphviz gviz) \
-		$(use_enable kerberos krb5) \
-		$(use_enable ldap) \
-		$(use_enable math gsl-shared) \
-		$(use_enable math genvector) \
-		$(use_enable math mathmore) \
-		$(use_enable math minuit2) \
-		$(use_enable math roofit) \
-		$(use_enable math tmva) \
-		$(use_enable math unuran) \
-		$(use_enable mysql) \
-		$(use_enable odbc) \
-		$(use_enable opengl) \
-		$(use_enable oracle) \
-		$(use_enable postgres pgsql) \
-		$(usex postgres "--with-pgsql-incdir=$(pg_config --includedir)" "") \
-		$(use_enable prefix rpath) \
-		$(use_enable pythia6) \
-		$(use_enable pythia8) \
-		$(use_enable python) \
-		$(use_enable qt4 qt) \
-		$(use_enable qt4 qtgsi) \
-		$(use_enable reflex cintex) \
-		$(use_enable reflex) \
-		$(use_enable ruby) \
-		$(use_enable sqlite) \
-		$(use_enable ssl) \
-		$(use_enable xml) \
-		$(use_enable xrootd) \
-		${EXTRA_ECONF} \
-		|| die "configure failed"
-}
-
-src_compile() {
-	emake OPT="${CXXFLAGS}" F77OPT="${FFLAGS}" ROOTSYS="${S}" LD_LIBRARY_PATH="${S}/lib"
-	if use emacs && ! use minimal; then
-		elisp-compile build/misc/*.el || die "elisp-compile failed"
-	fi
-}
-
-doc_install() {
-	cd "${S}"
-	if use doc && ! use minimal; then
-		einfo "Installing user's guides"
-		if use metric; then
-			dodoc "${DISTDIR}"/ROOTUsersGuideA4-${PV}.pdf
-			dodoc "${DISTDIR}"/ROOTPrimer-${PV}.pdf
-			use math && dodoc "${DISTDIR}"/Spectrum-${PV}.pdf
-		else
-			dodoc "${DISTDIR}"/ROOTUsersGuideLetter-${PV}.pdf
-			dodoc "${DISTDIR}"/ROOTPrimerLetter-${PV}.pdf
-			use math && dodoc "${DISTDIR}"/SpectrumLetter-${PV}.pdf
-		fi
-		use math && dodoc \
-			"${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
-			"${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
-	fi
-
-	if use examples && ! use minimal; then
-		# these should really be taken care of by the root make install
-		insinto /usr/share/doc/${PF}/examples/tutorials/tmva
-		doins -r tmva/test
-	else
-		rm -r "${ED}"/usr/share/doc/${PF}/examples || die
-	fi
-}
-
-daemon_install() {
-	cd "${S}"
-	local daemons="rootd proofd"
-	dodir /var/spool/rootd
-	fowners rootd:rootd /var/spool/rootd
-	dodir /var/spool/rootd/{pub,tmp}
-	fperms 1777 /var/spool/rootd/{pub,tmp}
-
-	for i in ${daemons}; do
-		newinitd "${FILESDIR}"/${i}.initd ${i}
-		newconfd "${FILESDIR}"/${i}.confd ${i}
-	done
-	if use xinetd; then
-		insinto /etc/xinetd
-		doins etc/daemons/{rootd,proofd}.xinetd
-	fi
-}
-
-desktop_install() {
-	cd "${S}"
-	echo "Icon=root-system-bin" >> etc/root.desktop
-	domenu etc/root.desktop
-	doicon build/package/debian/root-system-bin.png
-
-	insinto /usr/share/icons/hicolor/48x48/mimetypes
-	doins build/package/debian/application-x-root.png
-
-	insinto /usr/share/icons/hicolor/48x48/apps
-	doicon build/package/debian/root-system-bin.xpm
-}
-
-src_install() {
-	emake DESTDIR="${D}" install
-
-	echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/root" > 99root
-	if ! use minimal; then
-		use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
-		if use python; then
-			echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
-			python_optimize "${D}/usr/$(get_libdir)/root"
-		fi
-		use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
-	fi
-	doenvd 99root
-
-	# The build system installs Emacs support unconditionally and in the wrong
-	# directory. Remove it and call elisp-install in case of USE=emacs.
-	rm -r "${ED}"/usr/share/emacs
-	if use emacs && ! use minimal; then
-		elisp-install ${PN} build/misc/*.{el,elc} || die "elisp-install failed"
-	fi
-
-	doc_install
-	daemon_install
-	desktop_install
-
-	# Cleanup of files either already distributed or unused on Gentoo
-	rm "${ED}"usr/share/doc/${PF}/{INSTALL,LICENSE,COPYING.CINT} || die
-	rm "${ED}"usr/share/root/fonts/LICENSE || die
-	pushd "${ED}"usr/$(get_libdir)/root/cint/cint/lib > /dev/null
-	rm posix/mktypes dll_stl/setup \
-		G__* dll_stl/G__* dll_stl/rootcint_* posix/exten.o || die
-	rm "${ED}"usr/$(get_libdir)/root/cint/cint/include/makehpib || die
-	rm "${ED}"/etc/root/proof/*.sample || die
-	rm -r "${ED}"/etc/root/daemons || die
-	popd > /dev/null
-	# these should be in PATH
-	mv "${ED}"etc/root/proof/utils/pq2/pq2* \
-		"${ED}"usr/bin/ || die
-}
-
-pkg_postinst() {
-	fdo-mime_desktop_database_update
-}
-
-pkg_postrm() {
-	fdo-mime_desktop_database_update
-}

diff --git a/sci-physics/root/root-9999.ebuild b/sci-physics/root/root-9999.ebuild
index 4c6ffdb..05b899c 100644
--- a/sci-physics/root/root-9999.ebuild
+++ b/sci-physics/root/root-9999.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2013 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/root-5.34.09.ebuild,v 1.2 2013/09/05 19:44:52 mgorny Exp $
+# $Header: $
 
 EAPI=5
 
@@ -32,7 +32,7 @@ SRC_URI="${SRC_URI}
 			ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
 			http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf )
 		metric? ( ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideA4.pdf -> ROOTUsersGuideA4-${PV}.pdf )
-	   !metric? ( ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideLetter.pdf -> ROOTUsersGuideLetter-${PV}.pdf )
+		!metric? ( ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideLetter.pdf -> ROOTUsersGuideLetter-${PV}.pdf )
 		htmldoc? (
 			http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
 			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
@@ -103,7 +103,7 @@ CDEPEND="
 		oracle? ( dev-db/oracle-instantclient-basic )
 		postgres? ( dev-db/postgresql-base )
 		pythia6? ( sci-physics/pythia:6 )
-		pythia8? ( sci-physics/pythia:8 )
+		pythia8? ( >=sci-physics/pythia-8.1.80:8 )
 		python? ( ${PYTHON_DEPS} )
 		ruby? (
 				dev-lang/ruby
@@ -126,19 +126,19 @@ S="${WORKDIR}/${PN}"
 
 pkg_setup() {
 	fortran-2_pkg_setup
+	use python && python-single-r1_pkg_setup
 	echo
 	elog "There are extra options on packages not yet in Gentoo:"
 	elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
 	elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
 	elog "You can use the env variable EXTRA_ECONF variable for this."
 	elog "For example, for SRP, you would set: "
-	elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=/usr/$(get_libdir)\""
+	elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
 	echo
 	enewgroup rootd
 	enewuser rootd -1 -1 /var/spool/rootd rootd
 	use minimal && return
 
-	use python && python-single-r1_pkg_setup
 	if use math; then
 		if use openmp; then
 			if [[ $(tc-getCXX)$ == *g++* ]] && ! tc-has-openmp; then
@@ -311,8 +311,11 @@ doc_install() {
 	cd "${S}"
 	if use doc && ! use minimal; then
 		einfo "Installing user's guides"
-		use metric && dodoc "${DISTDIR}"/ROOTUsersGuideA4-${PV}.pdf || \
+		if use metric; then
+			dodoc "${DISTDIR}"/ROOTUsersGuideA4-${PV}.pdf
+		else
 			dodoc "${DISTDIR}"/ROOTUsersGuideLetter-${PV}.pdf
+		fi
 		use math && dodoc \
 			"${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
 			"${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
@@ -366,7 +369,7 @@ src_install() {
 		use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
 		if use python; then
 			echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
-			python_optimize /usr/$(get_libdir)/root
+			python_optimize "${ED}/usr/$(get_libdir)/root"
 		fi
 		use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
 	fi