From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 35D2613827E for ; Sat, 7 Dec 2013 16:22:36 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id EADEDE0AEF; Sat, 7 Dec 2013 16:22:31 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 6E45AE0AEF for ; Sat, 7 Dec 2013 16:22:31 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 1E28433EFCC for ; Sat, 7 Dec 2013 16:22:30 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id C4F371100B0 for ; Sat, 7 Dec 2013 16:22:28 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1386433319.bf9b101c4cffb2f90ca820beba0a16b069250198.jlec@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-chemistry/gromacs/ X-VCS-Repository: proj/sci X-VCS-Files: sci-chemistry/gromacs/ChangeLog sci-chemistry/gromacs/gromacs-5.0_beta1.ebuild sci-chemistry/gromacs/metadata.xml X-VCS-Directories: sci-chemistry/gromacs/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: bf9b101c4cffb2f90ca820beba0a16b069250198 X-VCS-Branch: master Date: Sat, 7 Dec 2013 16:22:28 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 2e94c194-d3df-41ce-8e56-da8dd4fc8e1e X-Archives-Hash: 37a138e02735cf466f789b191d7adbb8 commit: bf9b101c4cffb2f90ca820beba0a16b069250198 Author: Justin Lecher gentoo org> AuthorDate: Sat Dec 7 16:21:59 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sat Dec 7 16:21:59 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=bf9b101c sci-chemistry/gromacs: Fix multilib-strict problems Package-Manager: portage-2.2.7 --- sci-chemistry/gromacs/ChangeLog | 4 +++ sci-chemistry/gromacs/gromacs-5.0_beta1.ebuild | 11 +++++---- sci-chemistry/gromacs/metadata.xml | 34 +++++++++++++------------- 3 files changed, 27 insertions(+), 22 deletions(-) diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/ChangeLog index 4c5ac13..0688eb6 100644 --- a/sci-chemistry/gromacs/ChangeLog +++ b/sci-chemistry/gromacs/ChangeLog @@ -2,6 +2,10 @@ # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 07 Dec 2013; Justin Lecher gromacs-5.0_beta1.ebuild, + metadata.xml: + Fix multilib-strict problems + *gromacs-5.0_beta1 (06 Dec 2013) 06 Dec 2013; Alexey Shvetsov +gromacs-5.0_beta1.ebuild, diff --git a/sci-chemistry/gromacs/gromacs-5.0_beta1.ebuild b/sci-chemistry/gromacs/gromacs-5.0_beta1.ebuild index 81ed0cc..a60490f 100644 --- a/sci-chemistry/gromacs/gromacs-5.0_beta1.ebuild +++ b/sci-chemistry/gromacs/gromacs-5.0_beta1.ebuild @@ -160,6 +160,7 @@ src_configure() { -DGMX_USE_GCC44_BUG_WORKAROUND=OFF -DBUILD_TESTING=OFF -DGMX_BUILD_UNITTESTS=OFF + -DGMX_LIB_INSTALL_DIR=$(get_libdir) ${extra} ) @@ -241,18 +242,18 @@ src_install() { insinto /usr/share/zsh/site-functions newins "${ED}"/usr/bin/completion.zsh _${PN} fi - rm -f "${ED}"usr/bin/completion.* - rm -f "${ED}"usr/bin/g_options* - rm -f "${ED}"usr/bin/GMXRC* + rm -f "${ED}"usr/bin/completion.* || die + rm -f "${ED}"usr/bin/g_options* || die + rm -f "${ED}"usr/bin/GMXRC* || die readme.gentoo_create_doc } pkg_postinst() { - einfo + echo einfo "Please read and cite:" einfo "Gromacs 4, J. Chem. Theory Comput. 4, 435 (2008). " einfo "http://dx.doi.org/10.1021/ct700301q" - einfo + echo readme.gentoo_print_elog } diff --git a/sci-chemistry/gromacs/metadata.xml b/sci-chemistry/gromacs/metadata.xml index 880233e..49684a9 100644 --- a/sci-chemistry/gromacs/metadata.xml +++ b/sci-chemistry/gromacs/metadata.xml @@ -1,21 +1,21 @@ - sci-chemistry - - ottxor@gentoo.org - Christoph Junghans - - - Enable cuda non-bonded kernels - More precise calculations at the expense of speed - Single precision version of gromacs (default) - - Enable sse4.1 acceleration - Enable 128bit avx with fma (e.g. AMD BullDozer) - Enable 256bit avx (e.g. Intel Sandy Bridge) - Enable gromacs partly offensive quotes - Add acceleration through sci-libs/openmm - Use sci-libs/mkl for fft, blas, lapack routines - + sci-chemistry + + ottxor@gentoo.org + Christoph Junghans + + + Enable cuda non-bonded kernels + More precise calculations at the expense of speed + Single precision version of gromacs (default) + + Enable sse4.1 acceleration + Enable 128bit avx with fma (e.g. AMD BullDozer) + Enable 256bit avx (e.g. Intel Sandy Bridge) + Enable gromacs partly offensive quotes + Add acceleration through sci-libs/openmm + Use sci-libs/mkl for fft, blas, lapack routines +